Conservation of cofitness between CSW01_03620 and CSW01_04510 in Vibrio cholerae E7946 ATCC 55056

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03620 beta-hexosaminidase 1.0 CSW01_04510 50S ribosomal protein L31 type B 0.49 14
Dickeya dianthicola ME23 0.57 DZA65_RS13585 beta-N-acetylhexosaminidase 0.64 DZA65_RS06110 type B 50S ribosomal protein L31 low > 75
Dickeya dianthicola 67-19 0.57 HGI48_RS13115 beta-N-acetylhexosaminidase 0.64 HGI48_RS05785 type B 50S ribosomal protein L31 low > 71
Klebsiella pneumoniae MKP103 0.56 KDGMDA_18760 beta-N-acetylhexosaminidase 0.63 KDGMDA_14795 type B 50S ribosomal protein L31 low > 94
Klebsiella pneumoniae MRSN742743 0.56 GJGHJB_03148 nagZ beta-N-acetylhexosaminidase 0.63 GJGHJB_03832 rpmE2 type B 50S ribosomal protein L31 low > 83
Dickeya dadantii 3937 0.56 DDA3937_RS13050 beta-N-acetylhexosaminidase 0.64 DDA3937_RS05730 type B 50S ribosomal protein L31 low > 74
Pectobacterium carotovorum WPP14 0.56 HER17_RS08725 beta-N-acetylhexosaminidase 0.68 HER17_RS15745 type B 50S ribosomal protein L31 low > 75
Enterobacter sp. TBS_079 0.56 MPMX20_01788 Beta-hexosaminidase 0.64 MPMX20_01056 50S ribosomal protein L31 type B low > 85
Escherichia coli BW25113 0.56 b1107 nagZ beta-hexosaminidase (NCBI) 0.69 b0296 ykgM 50S ribosomal protein L31 (NCBI) low > 76
Escherichia coli ECRC101 0.55 MCAODC_22865 nagZ beta-N-acetylhexosaminidase 0.69 MCAODC_28405 rpmE2-1 type B 50S ribosomal protein L31 low > 87
Escherichia coli ECRC102 0.55 NIAGMN_24325 nagZ beta-N-acetylhexosaminidase 0.69 NIAGMN_07245 rpmE2-1 type B 50S ribosomal protein L31 low > 80
Escherichia coli ECRC99 0.55 KEDOAH_24250 nagZ beta-N-acetylhexosaminidase 0.69 KEDOAH_18760 rpmE2-1 type B 50S ribosomal protein L31 — —
Escherichia coli ECRC100 0.55 OKFHMN_03505 nagZ beta-N-acetylhexosaminidase 0.69 OKFHMN_09190 rpmE2-1 type B 50S ribosomal protein L31 low > 79
Escherichia fergusonii Becca 0.55 EFB2_02868 Beta-hexosaminidase 0.69 EFB2_03748 50S ribosomal protein L31 type B low > 86
Escherichia coli ECRC98 0.55 JDDGAC_07165 nagZ beta-N-acetylhexosaminidase 0.69 JDDGAC_12830 rpmE2-1 type B 50S ribosomal protein L31 low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_02559 Beta-hexosaminidase 0.69 OHPLBJKB_03385 50S ribosomal protein L31 type B low > 74
Escherichia coli ECRC62 0.55 BNILDI_19195 nagZ beta-N-acetylhexosaminidase 0.69 BNILDI_00085 rpmE2-1 type B 50S ribosomal protein L31 low > 75
Escherichia coli ECOR27 0.55 NOLOHH_21035 nagZ beta-N-acetylhexosaminidase 0.69 NOLOHH_01965 rpmE2-1 type B 50S ribosomal protein L31 low > 75
Escherichia coli ECOR38 0.55 HEPCGN_23980 nagZ beta-N-acetylhexosaminidase 0.69 HEPCGN_07710 rpmE2-1 type B 50S ribosomal protein L31 low > 88
Escherichia coli BL21 0.55 ECD_01103 beta N-acetyl-glucosaminidase 0.69 ECD_00255 50S ribosomal protein L31 type B; alternative zinc-limitation L31 protein low > 61
Serratia liquefaciens MT49 0.55 IAI46_09900 beta-N-acetylhexosaminidase 0.65 IAI46_05180 type B 50S ribosomal protein L31 low > 87
Escherichia coli Nissle 1917 0.55 ECOLIN_RS06390 beta-N-acetylhexosaminidase 0.69 ECOLIN_RS01925 type B 50S ribosomal protein L31 low > 55
Klebsiella michiganensis M5al 0.55 BWI76_RS11165 beta-N-acetylhexosaminidase 0.61 BWI76_RS06735 50S ribosomal protein L31 low > 92
Enterobacter asburiae PDN3 0.55 EX28DRAFT_1823 Beta-glucosidase-related glycosidases 0.64 EX28DRAFT_2504 ribosomal protein L31 low > 76
Erwinia tracheiphila HP pepo 2.2 0.54 IJEDHG_00590 nagZ beta-N-acetylhexosaminidase 0.61 IJEDHG_16575 rpmE type B 50S ribosomal protein L31 low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF3390 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) 0.59 GFF4373 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent 0.40 41
Erwinia amylovora T8 0.54 OLJFJH_15465 beta-N-acetylhexosaminidase 0.54 OLJFJH_17860 type B 50S ribosomal protein L31 low > 58
Erwinia tracheiphila SCR3 0.53 LU632_RS14755 nagZ beta-N-acetylhexosaminidase 0.61 LU632_RS18190 type B 50S ribosomal protein L31 low > 73
Pantoea agglomerans CFBP13505 P0401 0.53 PagCFBP13516_RS12055 nagZ beta-N-acetylhexosaminidase 0.62 PagCFBP13516_RS14770 type B 50S ribosomal protein L31 low > 80
Pantoea sp. MT58 0.53 IAI47_11995 beta-N-acetylhexosaminidase 0.63 IAI47_14520 type B 50S ribosomal protein L31 low > 76
Rahnella sp. WP5 0.50 EX31_RS24500 beta-N-acetylhexosaminidase 0.66 EX31_RS22465 type B 50S ribosomal protein L31 low > 89
Acinetobacter baumannii LAC-4 0.42 RR41_RS16490 beta-N-acetylhexosaminidase 0.61 RR41_RS17045 type B 50S ribosomal protein L31 low > 55
Pseudomonas protegens RBAN4 0.40 FABNJH_10220 nagZ beta-N-acetylhexosaminidase 0.64 FABNJH_24755 rpmE2 type B 50S ribosomal protein L31 — —
Pseudomonas aeruginosa MRSN321 0.40 PFGADD_01963 nagZ beta-N-acetylhexosaminidase 0.61 PFGADD_01368 rpmE2 type B 50S ribosomal protein L31 low > 99
Pseudomonas aeruginosa PUPa3 0.40 NPBIFN_02002 nagZ beta-N-acetylhexosaminidase 0.61 NPBIFN_01387 rpmE2 type B 50S ribosomal protein L31 low > 101
Pseudomonas aeruginosa PA14 0.40 IKLFDK_15290 beta-N-acetylhexosaminidase 0.61 IKLFDK_18385 type B 50S ribosomal protein L31 low > 98
Pseudomonas fluorescens SBW25 0.39 PFLU_RS07695 beta-N-acetylhexosaminidase 0.63 PFLU_RS05495 type B 50S ribosomal protein L31 low > 109
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS07695 beta-N-acetylhexosaminidase 0.63 PFLU_RS05495 type B 50S ribosomal protein L31 low > 109
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_3281 Glycoside hydrolase, family 3, N-terminal 0.59 Psyr_3920 LSU ribosomal protein L31P low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_3281 Glycoside hydrolase, family 3, N-terminal 0.59 Psyr_3920 LSU ribosomal protein L31P — —
Pseudomonas sp. BP01 0.39 JOY50_RS25085 nagZ beta-N-acetylhexosaminidase 0.55 JOY50_RS14120 type B 50S ribosomal protein L31 — —
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS09685 beta-hexosaminidase 0.57 HSERO_RS04310 50S ribosomal protein L31 — —
Acinetobacter radioresistens SK82 0.38 MPMX26_00420 Beta-hexosaminidase 0.64 MPMX26_00304 50S ribosomal protein L31 type B low > 36
Ralstonia sp. UNC404CL21Col 0.37 ABZR87_RS10230 beta-N-acetylhexosaminidase 0.55 ABZR87_RS10740 type B 50S ribosomal protein L31 — —
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS14015 beta-hexosaminidase 0.54 RR42_RS13325 50S ribosomal protein L31 — —
Lysobacter sp. OAE881 0.36 ABIE51_RS13815 beta-N-acetylhexosaminidase 0.56 ABIE51_RS17205 type B 50S ribosomal protein L31 — —
Ralstonia solanacearum UW163 0.36 UW163_RS11975 beta-N-acetylhexosaminidase 0.52 UW163_RS12580 50S ribosomal protein L31 type B — —
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS14510 beta-N-acetylhexosaminidase 0.52 RALBFv3_RS15110 50S ribosomal protein L31 type B — —
Castellaniella sp019104865 MT123 0.36 ABCV34_RS06985 beta-N-acetylhexosaminidase 0.46 ABCV34_RS00905 type B 50S ribosomal protein L31 — —
Ralstonia solanacearum PSI07 0.35 RPSI07_RS18950 beta-N-acetylhexosaminidase 0.52 RPSI07_RS18265 50S ribosomal protein L31 type B — —
Paraburkholderia bryophila 376MFSha3.1 0.35 H281DRAFT_04367 beta-N-acetylhexosaminidase 0.56 H281DRAFT_00824 LSU ribosomal protein L31P — —
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS04635 beta-N-acetylhexosaminidase 0.55 QEN71_RS22325 type B 50S ribosomal protein L31 — —
Paraburkholderia graminis OAS925 0.35 ABIE53_003031 beta-N-acetylhexosaminidase 0.56 ABIE53_002040 large subunit ribosomal protein L31 — —
Ralstonia solanacearum GMI1000 0.35 RS_RS05290 beta-N-acetylhexosaminidase 0.52 RS_RS05925 50S ribosomal protein L31 type B — —
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.3663.1 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) 0.48 Xcc-8004.1202.1 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent — —
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS14345 beta-hexosaminidase 0.57 BPHYT_RS09025 50S ribosomal protein L31 type B — —
Rhodanobacter denitrificans MT42 0.33 LRK55_RS16725 beta-N-acetylhexosaminidase 0.49 LRK55_RS11540 type B 50S ribosomal protein L31 — —
Rhodanobacter sp000427505 FW510-R12 0.33 LRK53_RS11930 beta-N-acetylhexosaminidase 0.49 LRK53_RS16725 type B 50S ribosomal protein L31 — —
Rhodanobacter denitrificans FW104-10B01 0.33 LRK54_RS17010 beta-N-acetylhexosaminidase 0.48 LRK54_RS11815 type B 50S ribosomal protein L31 — —
Acidovorax sp. GW101-3H11 0.33 Ac3H11_1561 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) 0.45 Ac3H11_465 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent — —
Rhodanobacter sp. FW510-T8 0.33 OKGIIK_07830 nagZ beta-N-acetylhexosaminidase 0.49 OKGIIK_12080 rpmE type B 50S ribosomal protein L31 — —
Dyella japonica UNC79MFTsu3.2 0.32 ABZR86_RS07110 beta-N-acetylhexosaminidase 0.50 ABZR86_RS11830 type B 50S ribosomal protein L31 — —
Variovorax sp. OAS795 0.32 ABID97_RS08390 beta-N-acetylhexosaminidase 0.36 ABID97_RS14640 type B 50S ribosomal protein L31 — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF3351 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) 0.42 GFF4238 LSU ribosomal protein L31p — —

Not shown: 23 genomes with orthologs for CSW01_03620 only; 13 genomes with orthologs for CSW01_04510 only