Conservation of cofitness between CSW01_09905 and CSW01_03825 in Vibrio cholerae E7946 ATCC 55056

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09905 long-chain-fatty-acid--CoA ligase FadD 1.0 CSW01_03825 malate synthase A 0.55 16
Serratia liquefaciens MT49 0.75 IAI46_14535 long-chain-fatty-acid--CoA ligase FadD 0.67 IAI46_23195 malate synthase A low > 86
Rahnella sp. WP5 0.75 EX31_RS10600 long-chain-fatty-acid--CoA ligase FadD 0.66 EX31_RS11740 malate synthase A low > 89
Dickeya dianthicola ME23 0.73 DZA65_RS11605 long-chain-fatty-acid--CoA ligase FadD 0.65 DZA65_RS20270 malate synthase A low > 75
Shewanella sp. ANA-3 0.73 Shewana3_2386 long-chain-fatty-acid--CoA ligase (RefSeq) 0.68 Shewana3_2943 malate synthase (RefSeq) 0.42 27
Dickeya dianthicola 67-19 0.73 HGI48_RS11260 long-chain-fatty-acid--CoA ligase FadD 0.66 HGI48_RS19150 malate synthase A low > 71
Pectobacterium carotovorum WPP14 0.72 HER17_RS11275 long-chain-fatty-acid--CoA ligase FadD 0.66 HER17_RS02290 malate synthase A low > 75
Escherichia coli ECOR27 0.72 NOLOHH_17115 fadD long-chain-fatty-acid--CoA ligase FadD 0.69 NOLOHH_05415 aceB malate synthase A low > 75
Escherichia coli ECOR38 0.72 HEPCGN_04985 fadD long-chain-fatty-acid--CoA ligase FadD 0.68 HEPCGN_11910 aceB malate synthase A low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_01928 Long-chain-fatty-acid--CoA ligase 0.68 OHPLBJKB_04036 Malate synthase A low > 73
Escherichia coli Nissle 1917 0.72 ECOLIN_RS10040 long-chain-fatty-acid--CoA ligase FadD 0.67 ECOLIN_RS25510 malate synthase A — —
Escherichia coli BW25113 0.72 b1805 fadD acyl-CoA synthase (NCBI) 0.68 b4014 aceB malate synthase (NCBI) low > 76
Escherichia coli BL21 0.72 ECD_01775 acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) 0.68 ECD_03886 malate synthase A low > 61
Escherichia coli ECRC62 0.72 BNILDI_15900 fadD long-chain-fatty-acid--CoA ligase FadD 0.69 BNILDI_06105 aceB malate synthase A low > 75
Escherichia fergusonii Becca 0.72 EFB2_02195 Long-chain-fatty-acid--CoA ligase 0.68 EFB2_04596 Malate synthase A low > 86
Escherichia coli ECRC99 0.72 KEDOAH_01515 fadD long-chain-fatty-acid--CoA ligase FadD 0.68 KEDOAH_14890 aceB malate synthase A — —
Escherichia coli ECRC98 0.72 JDDGAC_01170 fadD long-chain-fatty-acid--CoA ligase FadD 0.68 JDDGAC_16895 aceB malate synthase A low > 86
Enterobacter asburiae PDN3 0.72 EX28DRAFT_0753 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 0.67 EX28DRAFT_4330 malate synthase A low > 76
Escherichia coli ECRC100 0.72 OKFHMN_26595 fadD long-chain-fatty-acid--CoA ligase FadD 0.68 OKFHMN_13270 aceB malate synthase A low > 80
Escherichia coli ECRC101 0.72 MCAODC_18815 fadD long-chain-fatty-acid--CoA ligase FadD 0.68 MCAODC_03770 aceB malate synthase A low > 87
Escherichia coli ECRC102 0.72 NIAGMN_01470 fadD long-chain-fatty-acid--CoA ligase FadD 0.68 NIAGMN_11020 aceB malate synthase A — —
Enterobacter sp. TBS_079 0.71 MPMX20_02711 Long-chain-fatty-acid--CoA ligase 0.67 MPMX20_00231 Malate synthase A 0.26 7
Klebsiella michiganensis M5al 0.71 BWI76_RS17800 long-chain-fatty-acid--CoA ligase 0.69 BWI76_RS01660 malate synthase A low > 92
Shewanella oneidensis MR-1 0.71 SO2581 fadD-1 long-chain-fatty-acid--CoA ligase (NCBI ptt file) 0.67 SO1483 aceB Malate synthase (EC 2.3.3.9) (from data) 0.45 8
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF2820 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.68 GFF1351 Malate synthase (EC 2.3.3.9) low > 78
Shewanella loihica PV-4 0.71 Shew_2188 long-chain-fatty-acid--CoA ligase (RefSeq) 0.66 Shew_1275 malate synthase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.70 Sama_1934 long-chain-fatty-acid--CoA ligase (RefSeq) 0.66 Sama_2381 malate synthase (RefSeq) 0.58 9
Pantoea sp. MT58 0.70 IAI47_08835 long-chain-fatty-acid--CoA ligase FadD 0.63 IAI47_18010 malate synthase A low > 76
Lysobacter sp. OAE881 0.60 ABIE51_RS11545 long-chain fatty acid--CoA ligase 0.42 ABIE51_RS00195 malate synthase A low > 62
Dechlorosoma suillum PS 0.59 Dsui_3212 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II 0.42 Dsui_0019 malate synthase A low > 51
Rhodanobacter denitrificans MT42 0.59 LRK55_RS00570 long-chain-fatty-acid--CoA ligase 0.42 LRK55_RS10230 malate synthase A low > 63
Rhodanobacter denitrificans FW104-10B01 0.59 LRK54_RS00795 long-chain-fatty-acid--CoA ligase 0.42 LRK54_RS10590 malate synthase A low > 59
Rhodanobacter sp000427505 FW510-R12 0.58 LRK53_RS09335 long-chain-fatty-acid--CoA ligase 0.42 LRK53_RS03380 malate synthase A low > 60
Xanthomonas campestris pv. campestris strain 8004 0.58 Xcc-8004.2896.1 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.44 Xcc-8004.310.1 Malate synthase (EC 2.3.3.9) low > 74
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS02155 AMP-binding protein 0.44 ABZR86_RS13485 malate synthase A low > 74
Rhodanobacter sp. FW510-T8 0.58 OKGIIK_06445 menE,fadK long-chain-fatty-acid--CoA ligase 0.42 OKGIIK_13315 aceB malate synthase A low > 52
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS07805 AMP-binding protein 0.42 ABZR87_RS11625 malate synthase A low > 80
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS18150 long-chain fatty acid--CoA ligase 0.42 RR42_RS12175 malate synthase low > 128
Ralstonia solanacearum PSI07 0.54 RPSI07_RS21355 long-chain fatty acid--CoA ligase 0.43 RPSI07_RS17310 malate synthase A low > 81
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS11850 long-chain fatty acid--CoA ligase 0.43 RALBFv3_RS00170 malate synthase A low > 76
Ralstonia solanacearum UW163 0.54 UW163_RS01735 long-chain fatty acid--CoA ligase 0.43 UW163_RS13500 malate synthase A — —
Paraburkholderia graminis OAS925 0.54 ABIE53_002420 long-chain acyl-CoA synthetase 0.44 ABIE53_002540 malate synthase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.54 H281DRAFT_05129 long-chain acyl-CoA synthetase 0.44 H281DRAFT_00576 malate synthase low > 103
Burkholderia phytofirmans PsJN 0.54 BPHYT_RS17295 long-chain fatty acid--CoA ligase 0.44 BPHYT_RS12305 Malate synthase (EC 2.3.3.9) (from data) 0.18 70
Herbaspirillum seropedicae SmR1 0.54 HSERO_RS19285 long-chain fatty acid--CoA ligase 0.44 HSERO_RS15200 malate synthase — —
Paraburkholderia sabiae LMG 24235 0.53 QEN71_RS22975 AMP-binding protein 0.43 QEN71_RS06250 malate synthase A low > 153
Ralstonia solanacearum GMI1000 0.53 RS_RS14290 long-chain-fatty-acid--CoA ligase 0.42 RS_RS06835 malate synthase A low > 80
Bosea sp. OAE506 0.46 ABIE41_RS11685 AMP-binding protein 0.49 ABIE41_RS09675 malate synthase A low > 77
Azospirillum sp. SherDot2 0.30 MPMX19_02151 Long-chain-fatty-acid--CoA ligase 0.48 MPMX19_02139 Malate synthase A low > 112
Azospirillum brasilense Sp245 0.27 AZOBR_RS31155 AMP-dependent synthetase 0.50 AZOBR_RS03245 malate synthase low > 97
Xanthobacter sp. DMC5 0.25 GFF521 Long-chain-fatty-acid--CoA ligase 0.49 GFF3695 Malate synthase A — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.18 CA264_07945 AMP-binding protein 0.47 CA264_09260 malate synthase A low > 74
Caulobacter crescentus NA1000 Δfur 0.17 CCNA_01017 acyl-CoA synthetase 0.47 CCNA_01843 malate synthase low > 67
Caulobacter crescentus NA1000 0.17 CCNA_01017 acyl-CoA synthetase 0.47 CCNA_01843 malate synthase low > 66

Not shown: 49 genomes with orthologs for CSW01_09905 only; 1 genomes with orthologs for CSW01_03825 only