Conservation of cofitness between CSW01_05550 and CSW01_03410 in Vibrio cholerae E7946 ATCC 55056

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05550 oligopeptide ABC transporter permease OppB 1.0 CSW01_03410 polyribonucleotide nucleotidyltransferase 0.55 20
Enterobacter sp. TBS_079 0.71 MPMX20_02586 Oligopeptide transport system permease protein OppB 0.77 MPMX20_04068 Polyribonucleotide nucleotidyltransferase — —
Escherichia coli ECRC100 0.71 OKFHMN_28635 oppB oligopeptide ABC transporter permease OppB 0.77 OKFHMN_18140 pnp polyribonucleotide nucleotidyltransferase low > 79
Escherichia fergusonii Becca 0.71 EFB2_02681 Oligopeptide transport system permease protein OppB 0.77 EFB2_00659 Polyribonucleotide nucleotidyltransferase low > 86
Escherichia coli BL21 0.71 ECD_01218 oligopeptide ABC transporter permease 0.77 ECD_03031 polynucleotide phosphorylase/polyadenylase low > 61
Escherichia coli ECRC98 0.71 JDDGAC_05940 oppB oligopeptide ABC transporter permease OppB 0.77 JDDGAC_21765 pnp polyribonucleotide nucleotidyltransferase low > 87
Escherichia coli ECRC62 0.71 BNILDI_18560 oppB oligopeptide ABC transporter permease OppB 0.77 BNILDI_01595 pnp polyribonucleotide nucleotidyltransferase low > 75
Escherichia coli ECOR27 0.71 NOLOHH_20415 oppB oligopeptide ABC transporter permease OppB 0.77 NOLOHH_09940 pnp polyribonucleotide nucleotidyltransferase low > 76
Escherichia coli BW25113 0.71 b1244 oppB oligopeptide permease ABC transporter membrane protein (NCBI) 0.77 b3164 pnp polynucleotide phosphorylase/polyadenylase (RefSeq) low > 76
Escherichia coli ECRC99 0.71 KEDOAH_25630 oppB oligopeptide ABC transporter permease OppB 0.77 KEDOAH_10010 pnp polyribonucleotide nucleotidyltransferase — —
Escherichia coli ECOR38 0.71 HEPCGN_25100 oppB oligopeptide ABC transporter permease OppB 0.77 HEPCGN_17015 pnp polyribonucleotide nucleotidyltransferase — —
Enterobacter asburiae PDN3 0.71 EX28DRAFT_0869 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 0.77 EX28DRAFT_3213 polyribonucleotide nucleotidyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_02439 Oligopeptide transport system permease protein OppB 0.77 OHPLBJKB_00536 Polyribonucleotide nucleotidyltransferase low > 74
Escherichia coli ECRC101 0.71 MCAODC_21625 oppB oligopeptide ABC transporter permease OppB 0.77 MCAODC_08660 pnp polyribonucleotide nucleotidyltransferase low > 87
Escherichia coli ECRC102 0.71 NIAGMN_27600 oppB oligopeptide ABC transporter permease OppB 0.77 NIAGMN_15900 pnp polyribonucleotide nucleotidyltransferase — —
Escherichia coli Nissle 1917 0.71 ECOLIN_RS07515 oligopeptide ABC transporter permease OppB 0.77 ECOLIN_RS18175 polyribonucleotide nucleotidyltransferase low > 55
Klebsiella michiganensis M5al 0.71 BWI76_RS17235 peptide ABC transporter permease 0.77 BWI76_RS25065 polyribonucleotide nucleotidyltransferase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF2745 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) 0.77 GFF1502 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) low > 78
Pectobacterium carotovorum WPP14 0.70 HER17_RS11015 oligopeptide ABC transporter permease OppB 0.76 HER17_RS18190 polyribonucleotide nucleotidyltransferase — —
Klebsiella pneumoniae MKP103 0.70 KDGMDA_24470 oligopeptide ABC transporter permease OppB 0.77 KDGMDA_05875 polyribonucleotide nucleotidyltransferase low > 95
Serratia liquefaciens MT49 0.70 IAI46_14200 oligopeptide ABC transporter permease OppB 0.76 IAI46_01955 polyribonucleotide nucleotidyltransferase low > 87
Erwinia amylovora T8 0.70 OLJFJH_13405 oligopeptide ABC transporter permease OppB 0.76 OLJFJH_07265 polyribonucleotide nucleotidyltransferase low > 58
Erwinia tracheiphila SCR3 0.70 LU632_RS12875 oppB oligopeptide ABC transporter permease OppB 0.77 LU632_RS21040 pnp polyribonucleotide nucleotidyltransferase — —
Erwinia tracheiphila HP pepo 2.2 0.70 IJEDHG_22740 oppB oligopeptide ABC transporter permease OppB 0.77 IJEDHG_13960 pnp polyribonucleotide nucleotidyltransferase — —
Dickeya dianthicola 67-19 0.69 HGI48_RS10385 oligopeptide ABC transporter permease OppB 0.77 HGI48_RS03260 polyribonucleotide nucleotidyltransferase low > 71
Dickeya dianthicola ME23 0.69 DZA65_RS10865 oligopeptide ABC transporter permease OppB 0.77 DZA65_RS03255 polyribonucleotide nucleotidyltransferase low > 75
Dickeya dadantii 3937 0.69 DDA3937_RS10380 oligopeptide ABC transporter permease OppB 0.77 DDA3937_RS03090 polyribonucleotide nucleotidyltransferase low > 74
Rahnella sp. WP5 0.68 EX31_RS10060 oligopeptide ABC transporter permease OppB 0.76 EX31_RS08520 polyribonucleotide nucleotidyltransferase low > 89
Pantoea sp. MT58 0.68 IAI47_09075 oligopeptide ABC transporter permease OppB 0.78 IAI47_17005 polyribonucleotide nucleotidyltransferase low > 76
Pantoea agglomerans CFBP13505 P0401 0.68 PagCFBP13505_RS02915 oligopeptide ABC transporter permease OppB 0.77 PagCFBP13505_RS09100 polyribonucleotide nucleotidyltransferase low > 74
Rhodospirillum rubrum S1H 0.56 Rru_A0591 Binding-protein-dependent transport systems inner membrane component (NCBI) 0.55 Rru_A3785 3' exoribonuclease (NCBI) — —
Sinorhizobium meliloti 1021 0.56 SM_b21197 oligopeptide uptake ABC transporter permease 0.55 SMc00324 polynucleotide phosphorylase/polyadenylase — —
Agrobacterium fabrum C58 0.52 Atu4258 oligopeptide ABC transporter permease 0.55 Atu0082 polyribonucleotide nucleotidyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.52 H281DRAFT_03128 oligopeptide transport system permease protein 0.63 H281DRAFT_04562 polyribonucleotide nucleotidyltransferase low > 103
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS22045 peptide ABC transporter permease 0.62 BPHYT_RS06600 polynucleotide phosphorylase/polyadenylase low > 109
Paraburkholderia graminis OAS925 0.51 ABIE53_004170 oligopeptide transport system permease protein 0.63 ABIE53_001586 polyribonucleotide nucleotidyltransferase low > 113
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS18355 ABC transporter permease subunit 0.62 QEN71_RS24175 polyribonucleotide nucleotidyltransferase — —
Rhizobium sp. OAE497 0.50 ABIE40_RS13570 ABC transporter permease subunit 0.55 ABIE40_RS00355 polyribonucleotide nucleotidyltransferase — —
Rhodopseudomonas palustris CGA009 0.35 TX73_006245 ABC transporter permease 0.53 TX73_002245 polyribonucleotide nucleotidyltransferase — —
Bosea sp. OAE506 0.35 ABIE41_RS21965 ABC transporter permease 0.54 ABIE41_RS04595 polyribonucleotide nucleotidyltransferase — —
Azospirillum sp. SherDot2 0.34 MPMX19_02826 Dipeptide transport system permease protein DppB 0.54 MPMX19_02526 Polyribonucleotide nucleotidyltransferase — —
Variovorax sp. SCN45 0.34 GFF1213 Oligopeptide transport permease protein OppB-like @ Glutathione ABC transporter, permease protein GsiC 0.63 GFF4746 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) — —
Pseudomonas sp. S08-1 0.34 OH686_08705 Dipeptide ABC transporter, permease protein DppB 0.62 OH686_17165 polyribonucleotide nucleotidyltransferase low > 80
Variovorax sp. OAS795 0.34 ABID97_RS15400 glutathione ABC transporter permease GsiC 0.63 ABID97_RS20520 polyribonucleotide nucleotidyltransferase low > 91
Ralstonia solanacearum GMI1000 0.34 RS_RS06925 glutathione ABC transporter permease GsiC 0.61 RS_RS10375 polyribonucleotide nucleotidyltransferase low > 80
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS00250 glutathione ABC transporter permease GsiC 0.61 RALBFv3_RS03005 polyribonucleotide nucleotidyltransferase low > 76
Ralstonia solanacearum UW163 0.33 UW163_RS13580 glutathione ABC transporter permease GsiC 0.61 UW163_RS10720 polyribonucleotide nucleotidyltransferase — —
Ralstonia solanacearum PSI07 0.33 RPSI07_RS17230 glutathione ABC transporter permease GsiC 0.61 RPSI07_RS14305 polyribonucleotide nucleotidyltransferase low > 81
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS11715 glutathione ABC transporter permease GsiC 0.61 ABZR87_RS14910 polyribonucleotide nucleotidyltransferase low > 80
Pseudomonas putida KT2440 0.33 PP_4455 glutathione ABC transporter permease subunit 0.61 PP_4708 Polyribonucleotide nucleotidyltransferase — —
Azospirillum brasilense Sp245 0.33 AZOBR_RS23020 ABC transporter permease 0.55 AZOBR_RS01385 polynucleotide phosphorylase — —
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS27425 ABC transporter permease 0.61 RR42_RS05485 polynucleotide phosphorylase/polyadenylase low > 128
Xanthobacter sp. DMC5 0.32 GFF802 Glutathione transport system permease protein GsiC 0.54 GFF2302 Polyribonucleotide nucleotidyltransferase — —
Marinobacter adhaerens HP15 0.31 HP15_2806 permease protein, ABC-type oligopeptide transporter 0.62 HP15_3063 polynucleotide phosphorylase/polyadenylase — —
Phaeobacter inhibens DSM 17395 0.31 PGA1_c32080 glutathione transport system permease protein GsiC 0.52 PGA1_c33000 polyribonucleotide nucleotidyltransferase Pnp — —
Herbaspirillum seropedicae SmR1 0.31 HSERO_RS15950 ABC transporter permease 0.65 HSERO_RS08755 polynucleotide phosphorylase/polyadenylase — —
Castellaniella sp019104865 MT123 0.30 ABCV34_RS13520 glutathione ABC transporter permease GsiC 0.60 ABCV34_RS01240 polyribonucleotide nucleotidyltransferase — —
Methylophilus sp. DMC18 0.29 GFF1314 Nickel transport system permease protein NikB 0.62 GFF2832 Polyribonucleotide nucleotidyltransferase low > 43
Desulfovibrio vulgaris Hildenborough JW710 0.29 DVU2461 appB oligopeptide ABC transporter, permease protein (TIGR) 0.40 DVU0503 pnp polyribonucleotide nucleotidyltransferase (TIGR) — —
Mycobacterium tuberculosis H37Rv 0.28 Rv3665c Probable dipeptide-transport integral membrane protein ABC transporter DppB 0.39 Rv2783c Bifunctional protein polyribonucleotide nucleotidyltransferase GpsI: guanosine pentaphosphate synthetase + polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) (pnpase) — —
Synechocystis sp000284455 PCC 6803 0.27 SGL_RS13325 ABC transporter permease 0.41 SGL_RS02295 polyribonucleotide nucleotidyltransferase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.26 ABZR88_RS19860 ABC transporter permease 0.39 ABZR88_RS06490 polyribonucleotide nucleotidyltransferase — —
Magnetospirillum magneticum AMB-1 0.25 AMB_RS09975 ABC transporter permease 0.56 AMB_RS20820 polyribonucleotide nucleotidyltransferase — —
Pedobacter sp. GW460-11-11-14-LB5 0.24 CA265_RS25300 ABC transporter permease 0.39 CA265_RS08985 polyribonucleotide nucleotidyltransferase — —

Not shown: 1 genomes with orthologs for CSW01_05550 only; 57 genomes with orthologs for CSW01_03410 only