Conservation of cofitness between CSW01_02560 and CSW01_03210 in Vibrio cholerae E7946 ATCC 55056

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02560 chromosome initiation inhibitor 1.0 CSW01_03210 iron ABC transporter permease 0.65 19
Klebsiella michiganensis M5al 0.46 BWI76_RS23930 transcriptional regulator ArgP 0.07 BWI76_RS10475 binding-protein-dependent transport system inner membrane protein low > 92
Rahnella sp. WP5 0.46 EX31_RS21460 LysR family transcriptional regulator ArgP 0.28 EX31_RS17575 iron ABC transporter permease low > 89
Dickeya dianthicola ME23 0.46 DZA65_RS19550 LysR family transcriptional regulator ArgP 0.26 DZA65_RS17205 iron ABC transporter permease low > 75
Dickeya dianthicola 67-19 0.46 HGI48_RS18415 LysR family transcriptional regulator ArgP 0.26 HGI48_RS16120 iron ABC transporter permease low > 71
Enterobacter asburiae PDN3 0.45 EX28DRAFT_2967 transcriptional regulator, ArgP family 0.08 EX28DRAFT_2436 ABC-type Fe3+ transport system, permease component low > 76
Erwinia tracheiphila SCR3 0.45 LU632_RS05845 LysR family transcriptional regulator ArgP 0.07 LU632_RS03340 iron ABC transporter permease low > 73
Erwinia tracheiphila HP pepo 2.2 0.45 IJEDHG_03330 argP HTH-type transcriptional regulator ArgP 0.07 IJEDHG_05515 Iron ABC transporter permease low > 61
Enterobacter sp. TBS_079 0.45 MPMX20_03773 HTH-type transcriptional regulator ArgP 0.08 MPMX20_01120 hypothetical protein low > 85
Dickeya dadantii 3937 0.45 DDA3937_RS18490 LysR family transcriptional regulator ArgP 0.26 DDA3937_RS16000 iron ABC transporter permease low > 74
Pectobacterium carotovorum WPP14 0.44 HER17_RS02715 LysR family transcriptional regulator ArgP 0.33 HER17_RS05515 iron ABC transporter permease low > 75
Shewanella loihica PV-4 0.42 Shew_1844 chromosome replication initiation inhibitor protein (RefSeq) 0.47 Shew_0862 binding-protein-dependent transport systems inner membrane component (RefSeq) low > 60
Shewanella amazonensis SB2B 0.40 Sama_2987 chromosome replication initiation inhibitor protein (RefSeq) 0.45 Sama_0667 iron(III) ABC transporter, permease protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.37 SO2866 iciA chromosome initiation inhibitor (NCBI ptt file) 0.50 SO0743 iron(III) ABC transporter, permease protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.37 Shewana3_1652 chromosome replication initiation inhibitor protein (RefSeq) 0.51 Shewana3_3516 binding-protein-dependent transport systems inner membrane component (RefSeq) low > 73
Pseudomonas aeruginosa MRSN321 0.35 DY961_RS24675 LysR family transcriptional regulator ArgP 0.28 DY961_RS11950 iron ABC transporter permease low > 100
Pseudomonas aeruginosa PA14 0.34 IKLFDK_02285 HTH-type transcriptional regulator ArgP 0.28 IKLFDK_27390 iron ABC transporter permease low > 98
Pseudomonas aeruginosa PUPa3 0.34 DQ20_RS57125 LysR family transcriptional regulator ArgP 0.27 DQ20_RS50165 iron ABC transporter permease low > 101
Pseudomonas segetis P6 0.34 ACVTMO_RS18615 LysR family transcriptional regulator ArgP 0.32 ACVTMO_RS22240 ABC transporter permease low > 75
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_4057 regulatory protein, LysR:LysR, substrate-binding protein 0.30 Psyr_0245 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_4057 regulatory protein, LysR:LysR, substrate-binding protein 0.30 Psyr_0245 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_04995 LysR family transcriptional regulator 0.32 AO356_13030 iron ABC transporter permease low > 104
Pseudomonas fluorescens SBW25 0.32 PFLU_RS23790 LysR family transcriptional regulator ArgP 0.32 PFLU_RS28920 iron ABC transporter permease low > 109
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS23790 LysR family transcriptional regulator ArgP 0.32 PFLU_RS28920 iron ABC transporter permease low > 109
Pseudomonas sp. SVBP6 0.32 COO64_RS12100 LysR family transcriptional regulator ArgP 0.30 COO64_RS00965 iron ABC transporter permease low > 93
Pseudomonas simiae WCS417 0.32 PS417_22165 LysR family transcriptional regulator 0.31 PS417_27260 iron ABC transporter permease low > 88
Pseudomonas stutzeri RCH2 0.32 Psest_1166 transcriptional regulator, ArgP family 0.27 Psest_0180 ABC-type Fe3+ transport system, permease component
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_03915 LysR family transcriptional regulator 0.32 AO353_08740 iron ABC transporter permease low > 101
Pseudomonas sp. BP01 0.32 JOY50_RS14225 LysR family transcriptional regulator ArgP 0.30 JOY50_RS22420 ABC transporter permease low > 84
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_1782 Chromosome initiation inhibitor 0.29 PfGW456L13_901 Ferric iron ABC transporter, permease protein low > 87
Pseudomonas lactucae CFBP13502 0.31 GEMAOFIL_04569 HTH-type transcriptional regulator ArgP 0.32 GEMAOFIL_05590 hypothetical protein low > 96
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_708 Chromosome initiation inhibitor 0.32 Pf1N1B4_2233 Ferric iron ABC transporter, permease protein low > 87
Pseudomonas orientalis W4I3 0.31 QF045_RS24300 LysR family transcriptional regulator ArgP 0.33 QF045_RS01630 iron ABC transporter permease low > 93
Pseudomonas sp. RS175 0.31 PFR28_00608 HTH-type transcriptional regulator ArgP 0.31 PFR28_04317 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_2849 Chromosome initiation inhibitor 0.32 Pf6N2E2_4484 Ferric iron ABC transporter, permease protein low > 103
Pseudomonas sp. DMC3 0.30 GFF5060 HTH-type transcriptional regulator ArgP 0.30 GFF311 hypothetical protein low > 89
Marinobacter adhaerens HP15 0.30 HP15_868 transcriptional regulator, LysR family 0.46 HP15_1455 iron(III) ABC transporter, permease protein low > 73
Pseudomonas putida KT2440 0.30 PP_0917 Chromosome initiation inhibitor 0.29 PP_5195 putative Iron ABC transporter, permease protein low > 96
Pseudomonas sp. S08-1 0.30 OH686_07195 Transcriptional regulator ArgP, LysR family 0.32 OH686_11180 Ferric iron ABC transporter, permease protein low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.29 GFF5065 Chromosome initiation inhibitor 0.27 GFF663 Ferric iron ABC transporter, permease protein
Alteromonas macleodii MIT1002 0.29 MIT1002_00129 OriC replication inhibitor 0.12 MIT1002_00116 Spermidine/putrescine transport system permease protein PotB low > 70
Burkholderia phytofirmans PsJN 0.28 BPHYT_RS07440 LysR family transcriptional regulator 0.12 BPHYT_RS23965 iron ABC transporter permease
Cupriavidus basilensis FW507-4G11 0.28 RR42_RS31465 LysR family transcriptional regulator 0.36 RR42_RS04345 iron ABC transporter permease low > 128
Azospirillum sp. SherDot2 0.28 MPMX19_01759 putative HTH-type transcriptional regulator 0.29 MPMX19_01379 hypothetical protein low > 112
Agrobacterium fabrum C58 0.27 Atu0928 transcriptional regulator, LysR family 0.38 Atu0613 ABC transporter, membrane spanning protein low > 89
Rhodospirillum rubrum S1H 0.27 Rru_A0658 Transcriptional Regulator, LysR family (NCBI) 0.38 Rru_A0768 Binding-protein-dependent transport systems inner membrane component (NCBI) low > 58
Acidovorax sp. GW101-3H11 0.27 Ac3H11_3378 chromosome replication initiation inhibitor protein 0.30 Ac3H11_3971 Ferric iron ABC transporter, permease protein low > 79
Azospirillum brasilense Sp245 0.26 AZOBR_RS01600 LysR family transcriptional regulator 0.39 AZOBR_RS03155 iron ABC transporter permease low > 97
Variovorax sp. OAS795 0.26 ABID97_RS23875 LysR family transcriptional regulator ArgP 0.29 ABID97_RS21260 iron ABC transporter permease low > 91
Dinoroseobacter shibae DFL-12 0.26 Dshi_0711 transcriptional regulator, LysR family (RefSeq) 0.36 Dshi_2023 binding-protein-dependent transport systems inner membrane component (RefSeq)
Phaeobacter inhibens DSM 17395 0.23 PGA1_c21740 transcriptional regulator, ArgP family 0.35 PGA1_c32540 putative Fe(3+)-transport system protein SfuB low > 62
Variovorax sp. SCN45 0.23 GFF2318 Transcriptional regulator ArgP, LysR family 0.28 GFF6761 Ferric iron ABC transporter, permease protein low > 127

Not shown: 33 genomes with orthologs for CSW01_02560 only; 11 genomes with orthologs for CSW01_03210 only