Conservation of cofitness between CSW01_11730 and CSW01_03205 in Vibrio cholerae E7946 ATCC 55056

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11730 2-dehydropantoate 2-reductase 1.0 CSW01_03205 iron ABC transporter substrate-binding protein 0.83 7
Rahnella sp. WP5 0.38 EX31_RS22180 2-dehydropantoate 2-reductase 0.43 EX31_RS17570 extracellular solute-binding protein low > 89
Enterobacter sp. TBS_079 0.36 MPMX20_01016 2-dehydropantoate 2-reductase 0.14 MPMX20_01119 Fe(3+)-binding periplasmic protein low > 85
Serratia liquefaciens MT49 0.35 IAI46_04950 2-dehydropantoate 2-reductase 0.13 IAI46_13015 iron ABC transporter substrate-binding protein low > 87
Enterobacter asburiae PDN3 0.35 EX28DRAFT_2546 2-dehydropantoate 2-reductase 0.14 EX28DRAFT_2437 ABC-type Fe3+ transport system, periplasmic component low > 76
Pectobacterium carotovorum WPP14 0.34 HER17_RS15910 2-dehydropantoate 2-reductase 0.43 HER17_RS14365 Fe(3+) ABC transporter substrate-binding protein low > 75
Klebsiella michiganensis M5al 0.34 BWI76_RS06405 2-dehydropantoate 2-reductase 0.13 BWI76_RS10470 iron ABC transporter substrate-binding protein low > 92
Dickeya dianthicola ME23 0.34 DZA65_RS05940 2-dehydropantoate 2-reductase 0.13 DZA65_RS09025 iron ABC transporter substrate-binding protein low > 75
Dickeya dianthicola 67-19 0.33 HGI48_RS05615 2-dehydropantoate 2-reductase 0.13 HGI48_RS08730 iron ABC transporter substrate-binding protein low > 71
Dickeya dadantii 3937 0.32 DDA3937_RS05555 2-dehydropantoate 2-reductase 0.14 DDA3937_RS08590 iron ABC transporter substrate-binding protein low > 74
Erwinia tracheiphila HP pepo 2.2 0.32 IJEDHG_16335 panE 2-dehydropantoate 2-reductase 0.15 IJEDHG_05510 iron ABC transporter substrate-binding protein low > 61
Erwinia tracheiphila SCR3 0.32 LU632_RS18455 panE 2-dehydropantoate 2-reductase 0.15 LU632_RS03345 iron ABC transporter substrate-binding protein low > 73
Shewanella sp. ANA-3 0.32 Shewana3_0780 2-dehydropantoate 2-reductase (RefSeq) 0.64 Shewana3_3517 extracellular solute-binding protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.31 SO3817 panE 2-dehydropantoate 2-reductase (NCBI ptt file) 0.64 SO0744 iron(III) ABC transporter, periplasmic iron(III)-binding protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.31 Shew_2895 2-dehydropantoate 2-reductase (RefSeq) 0.66 Shew_0861 extracellular solute-binding protein (RefSeq) low > 60
Pseudomonas sp. SVBP6 0.27 COO64_RS11970 putative 2-dehydropantoate 2-reductase 0.34 COO64_RS00970 extracellular solute-binding protein low > 93
Pseudomonas stutzeri RCH2 0.27 Psest_1140 2-dehydropantoate 2-reductase 0.34 Psest_0179 ABC-type Fe3+ transport system, periplasmic component
Shewanella amazonensis SB2B 0.27 Sama_2559 2-dehydropantoate 2-reductase (RefSeq) 0.67 Sama_0666 iron(III) ABC transporter, periplasmic iron(III)-binding protein (RefSeq)
Pseudomonas syringae pv. syringae B728a 0.25 Psyr_4088 ketopantoate reductase 0.31 Psyr_0244 extracellular solute-binding protein, family 1 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.25 Psyr_4088 ketopantoate reductase 0.31 Psyr_0244 extracellular solute-binding protein, family 1 low > 86
Pseudomonas aeruginosa PUPa3 0.25 DQ20_RS56950 putative 2-dehydropantoate 2-reductase 0.32 DQ20_RS50160 extracellular solute-binding protein low > 101
Pseudomonas aeruginosa PA14 0.24 IKLFDK_02110 putative 2-dehydropantoate 2-reductase 0.32 IKLFDK_27385 putative binding protein component of ABC iron transporter PA5217 low > 98
Pseudomonas aeruginosa MRSN321 0.24 DY961_RS24500 putative 2-dehydropantoate 2-reductase 0.32 DY961_RS11955 extracellular solute-binding protein low > 100
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_17955 2-dehydropantoate 2-reductase 0.32 AO356_13025 iron ABC transporter substrate-binding protein low > 104
Marinobacter adhaerens HP15 0.24 HP15_1312 2-dehydropantoate 2-reductase 0.53 HP15_1456 extracellular solute-binding protein, family 1 low > 73
Pseudomonas sp. RS175 0.24 PFR28_03426 2-dehydropantoate 2-reductase 0.32 PFR28_04318 putative binding protein component of ABC iron transporter low > 88
Pseudomonas fluorescens FW300-N2E2 0.24 Pf6N2E2_5521 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.32 Pf6N2E2_4483 Ferric iron ABC transporter, iron-binding protein low > 103
Pseudomonas putida KT2440 0.24 PP_1351 putative 2-dehydropantoate 2-reductase 0.33 PP_5196 putative iron(III)|iron ABC transporter, periplasmic iron-binding protein low > 96
Pseudomonas segetis P6 0.23 MPMX49_03786 2-dehydropantoate 2-reductase 0.32 MPMX49_04483 putative binding protein component of ABC iron transporter low > 75
Pseudomonas sp. BP01 0.23 JOY50_RS15040 putative 2-dehydropantoate 2-reductase 0.32 JOY50_RS22425 extracellular solute-binding protein low > 84
Pseudomonas fluorescens FW300-N2E3 0.23 AO353_03645 2-dehydropantoate 2-reductase 0.31 AO353_08745 iron ABC transporter substrate-binding protein low > 101
Pseudomonas sp. S08-1 0.23 OH686_08220 2-dehydropantoate 2-reductase 0.32 OH686_11185 Ferric iron ABC transporter, iron-binding protein low > 80
Pseudomonas orientalis W4I3 0.22 QF045_RS24680 putative 2-dehydropantoate 2-reductase 0.32 QF045_RS01635 extracellular solute-binding protein low > 93
Pseudomonas fluorescens GW456-L13 0.22 PfGW456L13_1839 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.32 PfGW456L13_900 Ferric iron ABC transporter, iron-binding protein low > 87
Pseudomonas fluorescens FW300-N1B4 0.22 Pf1N1B4_651 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.32 Pf1N1B4_2232 Ferric iron ABC transporter, iron-binding protein low > 87
Pseudomonas simiae WCS417 0.22 PS417_22515 2-dehydropantoate 2-reductase 0.32 PS417_27265 iron ABC transporter substrate-binding protein low > 88
Pseudomonas sp. DMC3 0.22 GFF5199 2-dehydropantoate 2-reductase 0.31 GFF312 putative binding protein component of ABC iron transporter low > 89
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS24155 putative 2-dehydropantoate 2-reductase 0.32 PFLU_RS28925 extracellular solute-binding protein low > 109
Pseudomonas fluorescens SBW25 0.21 PFLU_RS24155 putative 2-dehydropantoate 2-reductase 0.32 PFLU_RS28925 extracellular solute-binding protein 0.55 47
Rhodopseudomonas palustris CGA009 0.21 TX73_023700 2-dehydropantoate 2-reductase 0.47 TX73_021525 Fe(3+) ABC transporter substrate-binding protein low > 86
Pseudomonas lactucae CFBP13502 0.21 GEMAOFIL_04655 2-dehydropantoate 2-reductase 0.32 GEMAOFIL_05591 putative binding protein component of ABC iron transporter low > 96
Bosea sp. OAE506 0.20 ABIE41_RS11280 2-dehydropantoate 2-reductase 0.43 ABIE41_RS15170 extracellular solute-binding protein low > 77
Herbaspirillum seropedicae SmR1 0.20 HSERO_RS09230 2-dehydropantoate 2-reductase 0.31 HSERO_RS09445 iron deficiency-induced protein A low > 78
Variovorax sp. SCN45 0.19 GFF3590 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.43 GFF6762 Ferric iron ABC transporter, iron-binding protein low > 127
Variovorax sp. OAS795 0.18 ABID97_RS00870 2-dehydropantoate 2-reductase 0.43 ABID97_RS21255 Fe(3+) ABC transporter substrate-binding protein low > 91
Acidovorax sp. GW101-3H11 0.18 Ac3H11_2346 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.33 Ac3H11_2605 Ferric iron ABC transporter, iron-binding protein low > 79
Cupriavidus basilensis FW507-4G11 0.14 RR42_RS32960 2-dehydropantoate 2-reductase 0.35 RR42_RS04335 iron deficiency-induced protein A low > 128
Burkholderia phytofirmans PsJN 0.14 BPHYT_RS27355 2-dehydropantoate 2-reductase 0.20 BPHYT_RS23970 iron ABC transporter substrate-binding protein low > 109
Azospirillum brasilense Sp245 0.09 AZOBR_RS12955 2-dehydropantoate 2-reductase 0.35 AZOBR_RS03165 iron deficiency-induced protein A
Rhodospirillum rubrum S1H 0.09 Rru_A3518 2-dehydropantoate 2-reductase (NCBI) 0.55 Rru_A0769 extracellular solute-binding protein, family 1 (NCBI) low > 58
Hydrogenophaga sp. GW460-11-11-14-LB1 0.09 GFF1821 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.31 GFF3827 Ferric iron ABC transporter, iron-binding protein low > 90

Not shown: 35 genomes with orthologs for CSW01_11730 only; 12 genomes with orthologs for CSW01_03205 only