Conservation of cofitness between CSW01_09245 and CSW01_03175 in Vibrio cholerae E7946 ATCC 55056

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09245 Holliday junction branch migration protein RuvA 1.0 CSW01_03175 penicillin-binding protein 1B 0.78 9
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_01867 Holliday junction ATP-dependent DNA helicase RuvA 0.45 OHPLBJKB_03513 Penicillin-binding protein 1B — —
Escherichia fergusonii Becca 0.67 EFB2_02081 Holliday junction ATP-dependent DNA helicase RuvA 0.45 EFB2_03895 Penicillin-binding protein 1B — —
Escherichia coli BW25113 0.67 b1861 ruvA Holliday junction DNA helicase motor protein (NCBI) 0.45 b0149 mrcB penicillin-binding protein 1b (NCBI) low > 76
Escherichia coli Nissle 1917 0.67 ECOLIN_RS10365 Holliday junction branch migration protein RuvA 0.45 ECOLIN_RS00835 bifunctional glycosyl transferase/transpeptidase — —
Escherichia coli BL21 0.67 ECD_01832 component of RuvABC resolvasome, regulatory subunit 0.45 ECD_00148 fused glycosyl transferase and transpeptidase — —
Escherichia coli ECRC62 0.67 BNILDI_15515 ruvA Holliday junction branch migration protein RuvA 0.45 BNILDI_09000 mrcB bifunctional glycosyl transferase/transpeptidase — —
Rahnella sp. WP5 0.66 EX31_RS11675 Holliday junction branch migration protein RuvA 0.45 EX31_RS03230 bifunctional glycosyl transferase/transpeptidase low > 89
Escherichia coli ECOR27 0.66 NOLOHH_16725 ruvA Holliday junction branch migration protein RuvA 0.45 NOLOHH_02670 mrcB bifunctional glycosyl transferase/transpeptidase — —
Escherichia coli ECRC101 0.66 MCAODC_19125 ruvA Holliday junction branch migration protein RuvA 0.45 MCAODC_00840 mrcB bifunctional glycosyl transferase/transpeptidase — —
Escherichia coli ECRC99 0.66 KEDOAH_01825 ruvA Holliday junction branch migration protein RuvA 0.45 KEDOAH_17830 mrcB bifunctional glycosyl transferase/transpeptidase — —
Escherichia coli ECRC101 0.66 OKFHMN_26280 ruvA Holliday junction branch migration protein RuvA 0.45 OKFHMN_10325 mrcB bifunctional glycosyl transferase/transpeptidase — —
Escherichia coli ECOR38 0.66 HEPCGN_04690 ruvA Holliday junction branch migration protein RuvA 0.45 HEPCGN_08275 mrcB bifunctional glycosyl transferase/transpeptidase — —
Enterobacter sp. TBS_079 0.66 MPMX20_02767 Holliday junction ATP-dependent DNA helicase RuvA 0.45 MPMX20_00835 Penicillin-binding protein 1B low > 85
Escherichia coli ECRC102 0.66 NIAGMN_01780 ruvA Holliday junction branch migration protein RuvA 0.45 NIAGMN_08175 mrcB bifunctional glycosyl transferase/transpeptidase — —
Escherichia coli ECRC98 0.66 JDDGAC_00855 ruvA Holliday junction branch migration protein RuvA 0.45 JDDGAC_13920 mrcB bifunctional glycosyl transferase/transpeptidase — —
Enterobacter asburiae PDN3 0.66 EX28DRAFT_0695 Holliday junction DNA helicase subunit RuvA 0.45 EX28DRAFT_3738 penicillin-binding protein 1B — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF1640 Holliday junction DNA helicase RuvA 0.45 GFF83 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) — —
Klebsiella michiganensis M5al 0.65 BWI76_RS18150 Holliday junction branch migration protein RuvA 0.45 BWI76_RS05120 bifunctional glycosyl transferase/transpeptidase — —
Shewanella loihica PV-4 0.64 Shew_2076 Holliday junction DNA helicase RuvA (RefSeq) 0.43 Shew_3123 penicillin-binding protein 1B (RefSeq) — —
Alteromonas macleodii MIT1002 0.63 MIT1002_01332 Holliday junction ATP-dependent DNA helicase RuvA 0.41 MIT1002_00409 Murein polymerase — —
Pantoea sp. MT58 0.63 IAI47_08445 Holliday junction branch migration protein RuvA 0.46 IAI47_15615 bifunctional glycosyl transferase/transpeptidase 0.23 34
Shewanella oneidensis MR-1 0.63 SO2430 ruvA Holliday junction DNA helicase RuvA (NCBI ptt file) 0.43 SO0633 mrcB penicillin-binding protein 1B (NCBI ptt file) 0.36 29
Shewanella sp. ANA-3 0.62 Shewana3_1956 ruvA Holliday junction DNA helicase RuvA (RefSeq) 0.43 Shewana3_0623 penicillin-binding protein 1B (RefSeq) 0.43 21
Dickeya dadantii 3937 0.61 DDA3937_RS10080 Holliday junction branch migration protein RuvA 0.48 DDA3937_RS15915 bifunctional glycosyl transferase/transpeptidase — —
Dickeya dianthicola ME23 0.61 DZA65_RS10525 Holliday junction branch migration protein RuvA 0.48 DZA65_RS17115 bifunctional glycosyl transferase/transpeptidase — —
Pectobacterium carotovorum WPP14 0.61 HER17_RS11845 Holliday junction branch migration protein RuvA 0.48 HER17_RS05600 bifunctional glycosyl transferase/transpeptidase — —
Dickeya dianthicola 67-19 0.61 HGI48_RS10110 Holliday junction branch migration protein RuvA 0.48 HGI48_RS16030 bifunctional glycosyl transferase/transpeptidase — —
Erwinia tracheiphila SCR3 0.60 LU632_RS13415 ruvA Holliday junction branch migration protein RuvA 0.46 LU632_RS20060 mrcB bifunctional glycosyl transferase/transpeptidase — —
Shewanella amazonensis SB2B 0.60 Sama_1840 ruvA Holliday junction DNA helicase RuvA (RefSeq) 0.43 Sama_2971 peptidoglycan glycosyltransferase (RefSeq) — —
Serratia liquefaciens MT49 0.60 IAI46_14625 Holliday junction branch migration protein RuvA 0.49 IAI46_21190 bifunctional glycosyl transferase/transpeptidase — —
Pseudomonas putida KT2440 0.57 PP_1216 Holliday junction ATP-dependent DNA helicase RuvA 0.38 PP_4683 transglycosylase/transpeptidase low > 96
Pseudomonas stutzeri RCH2 0.56 Psest_1496 Holliday junction DNA helicase, RuvA subunit 0.38 Psest_1032 penicillin-binding protein 1B — —
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_1409 Holliday junction DNA helicase subunit RuvA 0.37 Psyr_0842 Peptidoglycan glycosyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_1409 Holliday junction DNA helicase subunit RuvA 0.37 Psyr_0842 Peptidoglycan glycosyltransferase low > 86
Pseudomonas sp. S08-1 0.55 OH686_19130 Holliday junction DNA helicase RuvA 0.37 OH686_08150 penicillin-binding protein 1B — —
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_18020 ATP-dependent DNA helicase RuvA 0.38 AO356_16150 penicillin-binding protein 1B low > 104
Pseudomonas sp. RS175 0.55 PFR28_03413 Holliday junction ATP-dependent DNA helicase RuvA 0.38 PFR28_03703 Penicillin-binding protein 1B low > 88
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_5536 Holliday junction DNA helicase RuvA 0.37 Pf6N2E2_5171 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) low > 103
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_03585 ATP-dependent DNA helicase RuvA 0.38 AO353_14475 penicillin-binding protein 1B low > 101
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_638 Holliday junction DNA helicase RuvA 0.38 Pf1N1B4_2874 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) — —
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_1852 Holliday junction DNA helicase RuvA 0.37 PfGW456L13_1535 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) 0.38 44
Kangiella aquimarina DSM 16071 0.53 B158DRAFT_1125 Holliday junction DNA helicase subunit RuvA 0.33 B158DRAFT_0038 penicillin-binding protein 1B low > 40
Marinobacter adhaerens HP15 0.52 HP15_2041 Holliday junction ATP-dependent DNA helicase RuvA 0.36 HP15_338 penicillin-binding protein 1B — —
Pseudomonas fluorescens SBW25 0.52 PFLU_RS24090 Holliday junction branch migration protein RuvA 0.38 PFLU_RS25665 penicillin-binding protein 1B low > 109
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS24090 Holliday junction branch migration protein RuvA 0.38 PFLU_RS25665 penicillin-binding protein 1B 0.25 73
Pseudomonas simiae WCS417 0.52 PS417_22450 ATP-dependent DNA helicase RuvA 0.38 PS417_23825 penicillin-binding protein low > 88
Rhodanobacter denitrificans MT42 0.48 LRK55_RS04690 Holliday junction branch migration protein RuvA 0.32 LRK55_RS12445 penicillin-binding protein 1B — —
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS04910 Holliday junction branch migration protein RuvA 0.32 LRK54_RS12740 penicillin-binding protein 1B — —
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS10840 Holliday junction branch migration protein RuvA 0.31 ABZR86_RS19740 penicillin-binding protein 1B low > 74
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_01840 ruvA Holliday junction branch migration protein RuvA 0.31 OKGIIK_02185 Penicillin-binding protein 1B — —
Lysobacter sp. OAE881 0.44 ABIE51_RS05045 Holliday junction branch migration protein RuvA 0.28 ABIE51_RS05185 penicillin-binding protein 1B low > 62
Acinetobacter radioresistens SK82 0.42 MPMX26_02185 Holliday junction ATP-dependent DNA helicase RuvA 0.31 MPMX26_02029 Penicillin-binding protein 1B low > 36
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.1436.1 Holliday junction DNA helicase RuvA 0.28 Xcc-8004.1494.1 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) low > 74

Not shown: 47 genomes with orthologs for CSW01_09245 only; 0 genomes with orthologs for CSW01_03175 only