Conservation of cofitness between CSW01_12320 and CSW01_02490 in Vibrio cholerae E7946 ATCC 55056

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12320 3',5'-cyclic-AMP phosphodiesterase 1.0 CSW01_02490 glutathione synthetase 0.81 17
Dickeya dadantii 3937 0.54 DDA3937_RS01755 3',5'-cyclic-AMP phosphodiesterase 0.77 DDA3937_RS18560 glutathione synthase low > 74
Pantoea sp. MT58 0.53 IAI47_03150 3',5'-cyclic-AMP phosphodiesterase 0.74 IAI47_03615 glutathione synthase low > 76
Dickeya dianthicola 67-19 0.53 HGI48_RS01650 3',5'-cyclic-AMP phosphodiesterase 0.76 HGI48_RS18495 glutathione synthase low > 71
Erwinia amylovora T8 0.53 OLJFJH_07690 3' 5'-cyclic-AMP phosphodiesterase 0.76 OLJFJH_08570 glutathione synthase low > 58
Dickeya dianthicola ME23 0.53 DZA65_RS01725 3',5'-cyclic-AMP phosphodiesterase 0.76 DZA65_RS19630 glutathione synthase low > 75
Pantoea agglomerans CFBP13505 P0401 0.53 PagCFBP13505_RS11970 3',5'-cyclic-AMP phosphodiesterase 0.75 PagCFBP13505_RS16080 glutathione synthase low > 74
Rahnella sp. WP5 0.53 EX31_RS25975 3',5'-cyclic-AMP phosphodiesterase 0.77 EX31_RS02665 glutathione synthase low > 89
Klebsiella michiganensis M5al 0.52 BWI76_RS24385 phosphodiesterase 0.75 BWI76_RS24075 glutathione synthase low > 92
Serratia liquefaciens MT49 0.51 IAI46_21930 3',5'-cyclic-AMP phosphodiesterase 0.80 IAI46_21390 glutathione synthase low > 86
Erwinia tracheiphila SCR3 0.51 LU632_RS20620 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.75 LU632_RS05480 gshB glutathione synthase
Erwinia tracheiphila HP pepo 2.2 0.51 IJEDHG_14450 cpdA 3' 5'-cyclic-AMP phosphodiesterase 0.75 IJEDHG_03430 gshB glutathione synthase
Escherichia coli Nissle 1917 0.50 ECOLIN_RS17500 3',5'-cyclic-AMP phosphodiesterase 0.76 ECOLIN_RS16395 glutathione synthase
Escherichia fergusonii Becca 0.50 EFB2_00776 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA 0.76 EFB2_00955 Glutathione synthetase low > 86
Escherichia coli ECRC98 0.50 JDDGAC_22455 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.76 JDDGAC_22905 gshB glutathione synthase low > 87
Escherichia coli ECRC101 0.50 MCAODC_09335 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.76 MCAODC_09795 gshB glutathione synthase low > 88
Escherichia coli ECRC100 0.50 OKFHMN_18820 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.76 OKFHMN_19275 gshB glutathione synthase low > 79
Escherichia coli ECRC99 0.50 KEDOAH_09325 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.76 KEDOAH_08865 gshB glutathione synthase
Escherichia coli ECOR27 0.50 NOLOHH_10625 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.76 NOLOHH_11145 gshB glutathione synthase low > 76
Escherichia coli ECRC62 0.50 BNILDI_00890 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.76 BNILDI_09725 gshB glutathione synthase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_00671 '3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA' transl_table=11 0.76 OHPLBJKB_00771 Glutathione synthetase low > 74
Escherichia coli BW25113 0.50 b3032 cpdA cyclic 3',5'-adenosine monophosphate phosphodiesterase (NCBI) 0.76 b2947 gshB glutathione synthetase (NCBI) low > 76
Escherichia coli ECOR38 0.50 HEPCGN_17695 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.76 HEPCGN_18580 gshB glutathione synthase low > 88
Escherichia coli ECRC102 0.50 NIAGMN_16585 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.76 NIAGMN_17040 gshB glutathione synthase low > 80
Escherichia coli BL21 0.49 ECD_02904 3',5' cAMP phosphodiesterase 0.76 ECD_02777 glutathione synthetase low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF3146 '3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)' transl_table=11 0.76 GFF3049 Glutathione synthetase (EC 6.3.2.3) low > 78
Klebsiella pneumoniae MKP103 0.48 KDGMDA_05210 3' 5'-cyclic-AMP phosphodiesterase 0.75 KDGMDA_04590 glutathione synthase 0.57 74
Pectobacterium carotovorum WPP14 0.48 HER17_RS19810 3',5'-cyclic-AMP phosphodiesterase 0.78 HER17_RS02635 glutathione synthase low > 75
Enterobacter asburiae PDN3 0.48 EX28DRAFT_3070 Predicted phosphohydrolases 0.75 EX28DRAFT_2985 glutathione synthase (EC 6.3.2.3) low > 76
Enterobacter sp. TBS_079 0.48 MPMX20_03879 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA 0.76 MPMX20_03805 Glutathione synthetase low > 85
Shewanella sp. ANA-3 0.44 Shewana3_0728 calcineurin phosphoesterase C-terminal domain-containing protein (RefSeq) 0.71 Shewana3_3445 glutathione synthetase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.44 SO3901 icc lacZ expression regulator (NCBI ptt file) 0.70 SO0831 gshB glutathione synthetase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.43 Sama_3045 lacZ expression regulator (RefSeq) 0.71 Sama_0574 glutathione synthetase (RefSeq) low > 62
Pseudomonas simiae WCS417 0.41 PS417_02380 serine/threonine protein phosphatase 0.63 PS417_26675 glutathione synthetase
Pseudomonas sp. S08-1 0.41 OH686_15825 3',5'-cyclic-nucleotide phosphodiesterase 0.65 OH686_10915 glutathione synthase
Shewanella loihica PV-4 0.41 Shew_0547 calcineurin phosphoesterase C-terminal domain-containing protein (RefSeq) 0.73 Shew_3225 glutathione synthetase (RefSeq)
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_3639 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) 0.65 Pf6N2E2_4612 Glutathione synthetase (EC 6.3.2.3)
Pseudomonas fluorescens SBW25 0.41 PFLU_RS02455 3',5'-cyclic-AMP phosphodiesterase 0.63 PFLU_RS28320 glutathione synthase low > 109
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS02455 3',5'-cyclic-AMP phosphodiesterase 0.63 PFLU_RS28320 glutathione synthase 0.21 53
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_08785 serine/threonine protein phosphatase 0.65 AO356_13475 glutathione synthetase
Pseudomonas lactucae CFBP13502 0.40 GEMAOFIL_00713 '3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA' transl_table=11 0.64 GEMAOFIL_05472 Glutathione synthetase low > 93
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_180 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) 0.64 PfGW456L13_1021 Glutathione synthetase (EC 6.3.2.3)
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_13035 serine/threonine protein phosphatase 0.64 AO353_08110 glutathione synthetase
Pseudomonas segetis P6 0.39 MPMX49_04179 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA 0.65 MPMX49_00625 Glutathione synthetase
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_0549 Metallophosphoesterase 0.67 Psyr_0487 glutathione synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_0549 Metallophosphoesterase 0.67 Psyr_0487 glutathione synthase low > 86
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_1442 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) 0.64 Pf1N1B4_2352 Glutathione synthetase (EC 6.3.2.3)
Pseudomonas sp. RS175 0.39 PFR28_05096 '3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA' transl_table=11 0.65 PFR28_04232 Glutathione synthetase
Pseudomonas aeruginosa PA14 0.38 IKLFDK_28695 3' 5'-cyclic-AMP phosphodiesterase 0.64 IKLFDK_23385 glutathione synthase
Pseudomonas sp. DMC3 0.38 GFF3188 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA 0.65 GFF199 Glutathione synthetase
Pseudomonas sp. BP01 0.38 JOY50_RS17115 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.65 JOY50_RS09725 gshB glutathione synthase
Pseudomonas stutzeri RCH2 0.38 Psest_0481 Predicted phosphohydrolases 0.61 Psest_0296 glutathione synthetase, prokaryotic
Pseudomonas putida KT2440 0.37 PP_4917 3',5'-cyclic-nucleotide phosphodiesterase 0.66 PP_4993 Glutathione synthetase low > 96
Pseudomonas sp. SVBP6 0.36 COO64_RS17780 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.65 COO64_RS13605 gshB glutathione synthase
Marinobacter adhaerens HP15 0.34 HP15_456 phosphohydrolase 0.62 HP15_3512 glutathione synthetase
Acinetobacter baumannii LAC-4 0.33 RR41_RS17725 3',5'-cyclic-AMP phosphodiesterase 0.53 RR41_RS00820 glutathione synthase low > 55
Acinetobacter radioresistens SK82 0.31 MPMX26_00178 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA 0.54 MPMX26_02936 Glutathione synthetase low > 36
Kangiella aquimarina DSM 16071 0.31 B158DRAFT_0977 Predicted phosphohydrolases 0.59 B158DRAFT_0189 glutathione synthase (EC 6.3.2.3)
Alteromonas macleodii MIT1002 0.21 MIT1002_00673 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA 0.62 MIT1002_03055 Glutathione synthetase low > 70
Ralstonia solanacearum IBSBF1503 0.21 RALBFv3_RS21090 phosphohydrolase 0.49 RALBFv3_RS10860 glutathione synthase low > 76
Ralstonia solanacearum UW163 0.21 UW163_RS22230 phosphohydrolase 0.49 UW163_RS02720 glutathione synthase
Ralstonia solanacearum GMI1000 0.20 RS_RS19730 phosphohydrolase 0.48 RS_RS01700 glutathione synthetase low > 80
Azospirillum sp. SherDot2 0.18 MPMX19_04066 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA 0.40 MPMX19_02474 Glutathione synthetase
Cupriavidus basilensis FW507-4G11 0.18 RR42_RS27795 metallophosphatase 0.46 RR42_RS01780 glutathione synthetase low > 128
Synechococcus elongatus PCC 7942 0.17 Synpcc7942_0586 hypothetical protein 0.36 Synpcc7942_2324 gshB glutathione synthetase low > 38
Xanthobacter sp. DMC5 0.16 GFF4007 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA 0.39 GFF2245 Glutathione synthetase
Paraburkholderia sabiae LMG 24235 0.15 QEN71_RS05540 phosphodiesterase 0.45 QEN71_RS01415 glutathione synthase low > 153
Variovorax sp. SCN45 0.15 GFF6061 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) 0.47 GFF6322 Glutathione synthetase (EC 6.3.2.3) low > 127
Paraburkholderia graminis OAS925 0.15 ABIE53_002840 Icc protein 0.47 ABIE53_000657 glutathione synthase low > 113

Not shown: 0 genomes with orthologs for CSW01_12320 only; 35 genomes with orthologs for CSW01_02490 only