Conservation of cofitness between CSW01_03435 and CSW01_01830 in Vibrio cholerae E7946 ATCC 55056

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03435 protease 1.0 CSW01_01830 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.76 8
Klebsiella michiganensis M5al 0.75 BWI76_RS24970 peptidase U32 0.73 BWI76_RS02530 tRNA dimethylallyltransferase low > 92
Klebsiella pneumoniae MRSN742743 0.75 KFA93_RS13035 peptidase U32 family protein 0.73 KFA93_RS21070 miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 82
Klebsiella pneumoniae MKP103 0.75 KDGMDA_05840 protease 0.73 KDGMDA_11030 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 94
Escherichia coli BW25113 0.74 b3158 yhbU predicted peptidase (collagenase-like) (NCBI) 0.72 b4171 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) low > 76
Escherichia coli ECRC100 0.74 OKFHMN_18175 protease 0.71 OKFHMN_12260 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 79
Escherichia coli ECRC101 0.74 MCAODC_08695 protease 0.71 MCAODC_02775 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 87
Escherichia coli ECOR38 0.74 HEPCGN_17050 protease 0.72 HEPCGN_10490 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 88
Escherichia coli ECRC98 0.74 JDDGAC_21800 protease 0.71 JDDGAC_15900 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 87
Escherichia coli ECRC62 0.74 BNILDI_01555 ubiU Ubiquinone biosynthesis protein UbiU 0.72 BNILDI_06965 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 75
Escherichia coli ECRC102 0.74 NIAGMN_15935 ubiU Ubiquinone biosynthesis protein UbiU 0.71 NIAGMN_10110 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 80
Escherichia coli ECOR27 0.74 NOLOHH_09975 ubiU Ubiquinone biosynthesis protein UbiU 0.72 NOLOHH_04525 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 75
Escherichia coli ECRC99 0.74 KEDOAH_09975 protease 0.71 KEDOAH_15895 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Escherichia coli BL21 0.74 ECD_03025 U32 peptidase family protein 0.72 ECD_04038 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.74 OHPLBJKB_00542 putative protease YhbU 0.72 OHPLBJKB_03871 tRNA dimethylallyltransferase — —
Rahnella sp. WP5 0.74 EX31_RS08480 U32 family peptidase 0.70 EX31_RS08825 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 89
Escherichia coli Nissle 1917 0.74 ECOLIN_RS18140 peptidase U32 family protein 0.71 ECOLIN_RS24225 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF1510 FIG139552: Putative protease 0.71 GFF824 tRNA dimethylallyltransferase (EC 2.5.1.75) low > 78
Pectobacterium carotovorum WPP14 0.74 HER17_RS18160 U32 family peptidase 0.71 HER17_RS02580 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 75
Escherichia fergusonii Becca 0.74 EFB2_00665 putative protease YhbU 0.71 EFB2_04364 tRNA dimethylallyltransferase low > 86
Dickeya dianthicola ME23 0.73 DZA65_RS03285 U32 family peptidase 0.69 DZA65_RS19685 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 75
Dickeya dadantii 3937 0.73 DDA3937_RS03115 U32 family peptidase 0.70 DDA3937_RS18615 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 74
Dickeya dianthicola 67-19 0.73 HGI48_RS03290 U32 family peptidase 0.69 HGI48_RS18550 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 71
Erwinia tracheiphila SCR3 0.72 LU632_RS21005 U32 family peptidase 0.68 LU632_RS02050 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 73
Erwinia tracheiphila HP pepo 2.2 0.72 IJEDHG_14005 protease 0.67 IJEDHG_06870 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Enterobacter asburiae PDN3 0.72 EX28DRAFT_3207 Collagenase and related proteases 0.71 EX28DRAFT_3368 tRNA dimethylallyltransferase low > 76
Enterobacter sp. TBS_079 0.72 MPMX20_04062 putative protease YhbU 0.71 MPMX20_00452 tRNA dimethylallyltransferase low > 85
Pantoea sp. MT58 0.72 IAI47_16965 U32 family peptidase 0.70 IAI47_02585 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 76
Pantoea agglomerans CFBP13505 P0401 0.71 PagCFBP13516_RS17185 ubiU ubiquinone anaerobic biosynthesis protein UbiU 0.70 PagCFBP13516_RS02600 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 80
Serratia liquefaciens MT49 0.71 IAI46_02015 U32 family peptidase 0.70 IAI46_01620 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 87
Pseudomonas aeruginosa PA14 0.65 IKLFDK_20175 protease 0.55 IKLFDK_28815 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 98
Pseudomonas aeruginosa PUPa3 0.65 DQ20_RS48610 peptidase U32 family protein 0.55 DQ20_RS51540 miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 101
Pseudomonas aeruginosa MRSN321 0.65 DY961_RS13305 peptidase U32 family protein 0.55 DY961_RS10515 miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 99
Pseudomonas stutzeri RCH2 0.65 Psest_0835 Collagenase and related proteases 0.58 Psest_0682 tRNA dimethylallyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_22050 protease 0.62 AO353_13140 tRNA dimethylallyltransferase low > 101
Pseudomonas sp. SVBP6 0.64 COO64_RS14190 peptidase U32 family protein 0.60 COO64_RS17895 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 91
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_5746 FIG139552: Putative protease 0.62 Pf1N1B4_1413 tRNA dimethylallyltransferase (EC 2.5.1.75) — —
Pseudomonas fluorescens FW300-N2C3 0.63 AO356_25160 protease 0.63 AO356_08660 tRNA dimethylallyltransferase low > 104
Pseudomonas sp. RS175 0.63 PFR28_02214 putative protease YhbU 0.62 PFR28_05120 tRNA dimethylallyltransferase low > 88
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_721 FIG139552: Putative protease 0.63 Pf6N2E2_3615 tRNA dimethylallyltransferase (EC 2.5.1.75) — —
Castellaniella sp019104865 MT123 0.63 ABCV34_RS06420 peptidase U32 family protein 0.50 ABCV34_RS08790 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Pseudomonas lactucae CFBP13502 0.63 GEMAOFIL_03433 putative protease YhbU 0.60 GEMAOFIL_00735 tRNA dimethylallyltransferase low > 96
Shewanella loihica PV-4 0.62 Shew_2787 peptidase U32 (RefSeq) 0.63 Shew_0565 tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) low > 60
Pseudomonas simiae WCS417 0.62 PS417_15755 protease 0.60 PS417_02485 tRNA delta(2)-isopentenylpyrophosphate transferase low > 88
Shewanella sp. ANA-3 0.62 Shewana3_1065 peptidase U32 (RefSeq) 0.63 Shewana3_0596 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) — —
Shewanella oneidensis MR-1 0.62 SO1249 peptidase, U32 family (NCBI ptt file) 0.65 SO0602 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.60 Sama_0998 U32 family peptidase (RefSeq) 0.62 Sama_3026 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) — —
Dechlorosoma suillum PS 0.60 Dsui_0962 collagenase-like protease 0.49 Dsui_1552 tRNA isopentenyltransferase MiaA — —
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_2375 Collagenase and related proteases 0.60 B158DRAFT_1951 tRNA dimethylallyltransferase low > 40
Acidovorax sp. GW101-3H11 0.57 Ac3H11_4294 FIG139552: Putative protease 0.47 Ac3H11_319 tRNA dimethylallyltransferase (EC 2.5.1.75) low > 79
Ralstonia solanacearum UW163 0.53 UW163_RS18050 protease 0.48 UW163_RS08390 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS16695 protease 0.48 RALBFv3_RS05235 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 76
Ralstonia solanacearum PSI07 0.53 RPSI07_RS06750 U32 family peptidase 0.48 RPSI07_RS12065 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 81
Ralstonia solanacearum GMI1000 0.49 RS_RS21795 U32 family peptidase 0.48 RS_RS12855 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 80
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS08775 protease 0.46 RR42_RS17210 tRNA delta(2)-isopentenylpyrophosphate transferase — —
Rhodopseudomonas palustris CGA009 0.46 TX73_004810 U32 family peptidase 0.28 TX73_010460 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Magnetospirillum magneticum AMB-1 0.46 AMB_RS02530 U32 family peptidase 0.27 AMB_RS17735 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 64
Azospirillum brasilense Sp245 0.45 AZOBR_RS28235 protease 0.26 AZOBR_RS06550 tRNA delta(2)-isopentenylpyrophosphate transferase — —
Azospirillum sp. SherDot2 0.45 MPMX19_03049 putative protease YhbU 0.27 MPMX19_01778 tRNA dimethylallyltransferase — —
Sinorhizobium meliloti 1021 0.42 SMa1291 Protease 0.31 SMc01435 tRNA delta(2)-isopentenylpyrophosphate transferase — —
Agrobacterium fabrum C58 0.41 Atu4397 protease 0.30 Atu2039 tRNA delta(2)-isopentenylpyrophosphate — —

Not shown: 1 genomes with orthologs for CSW01_03435 only; 55 genomes with orthologs for CSW01_01830 only