| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_03525 | | phosphoenolpyruvate-protein phosphotransferase PtsP | 1.0 | CSW01_01810 | | tRNA epoxyqueuosine(34) reductase QueG | 0.73 | 2 |
| Serratia liquefaciens MT49 | 0.50 | IAI46_20450 | | phosphoenolpyruvate--protein phosphotransferase | 0.67 | IAI46_01595 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 87 |
| Rahnella sp. WP5 | 0.48 | EX31_RS13200 | | phosphoenolpyruvate--protein phosphotransferase | 0.66 | EX31_RS08850 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 89 |
| Pantoea agglomerans CFBP13505 P0401 | 0.48 | PagCFBP13505_RS17045 | | phosphoenolpyruvate--protein phosphotransferase | 0.70 | PagCFBP13505_RS11155 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 74 |
| Escherichia fergusonii Becca | 0.48 | EFB2_01055 | | Phosphoenolpyruvate-dependent phosphotransferase system | 0.67 | EFB2_04369 | | Epoxyqueuosine reductase | low | > 86 |
| Escherichia coli Nissle 1917 | 0.48 | ECOLIN_RS15875 | | phosphoenolpyruvate--protein phosphotransferase | 0.67 | ECOLIN_RS24200 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 55 |
| Pantoea sp. MT58 | 0.48 | IAI47_03920 | | phosphoenolpyruvate--protein phosphotransferase | 0.70 | IAI47_02560 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 76 |
| Escherichia coli ECRC102 | 0.48 | NIAGMN_17775 | ptsP | phosphoenolpyruvate--protein phosphotransferase | 0.67 | NIAGMN_10135 | queG | tRNA epoxyqueuosine(34) reductase QueG | low | > 80 |
| Escherichia coli ECOR27 | 0.48 | NOLOHH_11890 | ptsP | phosphoenolpyruvate--protein phosphotransferase | 0.67 | NOLOHH_04550 | queG | tRNA epoxyqueuosine(34) reductase QueG | low | > 76 |
| Escherichia coli ECRC101 | 0.48 | MCAODC_10530 | ptsP | phosphoenolpyruvate--protein phosphotransferase | 0.67 | MCAODC_02800 | queG | tRNA epoxyqueuosine(34) reductase QueG | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.48 | OHPLBJKB_00901 | | Phosphoenolpyruvate-dependent phosphotransferase system | 0.67 | OHPLBJKB_03876 | | Epoxyqueuosine reductase | low | > 74 |
| Escherichia coli ECRC100 | 0.48 | OKFHMN_20005 | ptsP | phosphoenolpyruvate--protein phosphotransferase | 0.67 | OKFHMN_12285 | queG | tRNA epoxyqueuosine(34) reductase QueG | low | > 79 |
| Escherichia coli ECRC99 | 0.48 | KEDOAH_08125 | ptsP | phosphoenolpyruvate--protein phosphotransferase | 0.67 | KEDOAH_15870 | queG | tRNA epoxyqueuosine(34) reductase QueG | — | — |
| Escherichia coli ECRC98 | 0.48 | JDDGAC_23670 | ptsP | phosphoenolpyruvate--protein phosphotransferase | 0.67 | JDDGAC_15925 | queG | tRNA epoxyqueuosine(34) reductase QueG | low | > 87 |
| Escherichia coli ECOR38 | 0.48 | HEPCGN_19260 | ptsP | phosphoenolpyruvate--protein phosphotransferase | 0.67 | HEPCGN_10515 | queG | tRNA epoxyqueuosine(34) reductase QueG | low | > 88 |
| Escherichia coli BL21 | 0.48 | ECD_02677 | | PEP-protein phosphotransferase enzyme I; GAF domain containing protein | 0.67 | ECD_04033 | | epoxyqueuosine reductase, cobalamine-stimulated; queosine biosynthesis | low | > 61 |
| Escherichia coli ECRC62 | 0.48 | BNILDI_10370 | ptsP | phosphoenolpyruvate--protein phosphotransferase | 0.67 | BNILDI_06940 | queG | tRNA epoxyqueuosine(34) reductase QueG | low | > 75 |
| Escherichia coli BW25113 | 0.48 | b2829 | ptsP | fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) | 0.67 | b4166 | yjeS | predicted Fe-S electron transport protein (NCBI) | low | > 76 |
| Enterobacter asburiae PDN3 | 0.48 | EX28DRAFT_2904 | | phosphoenolpyruvate-protein phosphotransferase | 0.66 | EX28DRAFT_3363 | | epoxyqueuosine reductase | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.48 | GFF1311 | | FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated | 0.67 | GFF819 | | Epoxyqueuosine (oQ) reductase QueG | low | > 78 |
| Enterobacter sp. TBS_079 | 0.48 | MPMX20_03692 | | Phosphoenolpyruvate-dependent phosphotransferase system | 0.65 | MPMX20_00447 | | Epoxyqueuosine reductase | low | > 85 |
| Dickeya dadantii 3937 | 0.47 | DDA3937_RS04950 | | phosphoenolpyruvate--protein phosphotransferase | 0.69 | DDA3937_RS18645 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 74 |
| Dickeya dianthicola 67-19 | 0.47 | HGI48_RS04960 | | phosphoenolpyruvate--protein phosphotransferase | 0.68 | HGI48_RS18575 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 71 |
| Dickeya dianthicola ME23 | 0.47 | DZA65_RS05300 | | phosphoenolpyruvate--protein phosphotransferase | 0.68 | DZA65_RS19710 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 75 |
| Klebsiella pneumoniae MKP103 | 0.47 | KDGMDA_03855 | | phosphoenolpyruvate--protein phosphotransferase | 0.66 | KDGMDA_11005 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 95 |
| Pectobacterium carotovorum WPP14 | 0.46 | HER17_RS16580 | | phosphoenolpyruvate--protein phosphotransferase | 0.68 | HER17_RS02555 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 75 |
| Klebsiella michiganensis M5al | 0.46 | BWI76_RS23270 | | phosphoenolpyruvate--protein phosphotransferase PtsP | 0.66 | BWI76_RS02505 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 92 |
| Shewanella loihica PV-4 | 0.42 | Shew_1039 | | phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) | 0.64 | Shew_2979 | | putative iron-sulfur cluster binding protein (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.42 | Sama_0864 | | phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) | 0.61 | Sama_2625 | | iron-sulfur cluster-binding protein (RefSeq) | low | > 62 |
| Pseudomonas orientalis W4I3 | 0.42 | QF045_RS01375 | | phosphoenolpyruvate--protein phosphotransferase | 0.54 | QF045_RS05520 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 93 |
| Pseudomonas fluorescens SBW25 | 0.42 | PFLU_RS28645 | | phosphoenolpyruvate--protein phosphotransferase | 0.55 | PFLU_RS02540 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.42 | PFLU_RS28645 | | phosphoenolpyruvate--protein phosphotransferase | 0.55 | PFLU_RS02540 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 109 |
| Shewanella sp. ANA-3 | 0.42 | Shewana3_3042 | | phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) | 0.64 | Shewana3_0745 | | putative iron-sulfur cluster binding protein (RefSeq) | low | > 73 |
| Pseudomonas lactucae CFBP13502 | 0.42 | GEMAOFIL_05538 | | Phosphoenolpyruvate-dependent phosphotransferase system | 0.54 | GEMAOFIL_00730 | | Epoxyqueuosine reductase | low | > 96 |
| Pseudomonas simiae WCS417 | 0.41 | PS417_26985 | | phosphoenolpyruvate-protein phosphotransferase | 0.54 | PS417_02460 | | epoxyqueuosine reductase | low | > 88 |
| Marinobacter adhaerens HP15 | 0.41 | HP15_463 | | fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain protein | 0.50 | HP15_2505 | | iron-sulfur cluster binding protein | low | > 73 |
| Pseudomonas fluorescens GW456-L13 | 0.41 | PfGW456L13_953 | | FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated | 0.54 | PfGW456L13_160 | | Epoxyqueuosine (oQ) reductase QueG | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.41 | Psest_3862 | | phosphoenolpyruvate-protein phosphotransferase | 0.57 | Psest_0677 | | iron-sulfur cluster binding protein, putative | low | > 67 |
| Pseudomonas segetis P6 | 0.41 | MPMX49_00587 | | Phosphoenolpyruvate-dependent phosphotransferase system | 0.55 | MPMX49_04159 | | Epoxyqueuosine reductase | low | > 75 |
| Pseudomonas sp. BP01 | 0.41 | JOY50_RS20665 | ptsP | phosphoenolpyruvate--protein phosphotransferase | 0.54 | JOY50_RS17200 | queG | tRNA epoxyqueuosine(34) reductase QueG | low | > 84 |
| Pseudomonas fluorescens FW300-N1B4 | 0.41 | Pf1N1B4_2284 | | FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated | 0.54 | Pf1N1B4_1418 | | Epoxyqueuosine (oQ) reductase QueG | low | > 87 |
| Pseudomonas putida KT2440 | 0.41 | PP_5145 | | phosphoenolpyruvate-dependent regulator (with NPR and NTR proteins) | 0.54 | PP_4900 | | epoxyqueuosine reductase | low | > 96 |
| Pseudomonas sp. SVBP6 | 0.41 | COO64_RS12700 | ptsP | phosphoenolpyruvate--protein phosphotransferase | 0.54 | COO64_RS17870 | queG | tRNA epoxyqueuosine(34) reductase QueG | low | > 93 |
| Pseudomonas fluorescens FW300-N2E2 | 0.41 | Pf6N2E2_3942 | | FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated | 0.54 | Pf6N2E2_3620 | | Epoxyqueuosine (oQ) reductase QueG | low | > 103 |
| Pseudomonas sp. S08-1 | 0.41 | OH686_11430 | | Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated | 0.55 | OH686_09500 | | epoxyqueuosine reductase | low | > 80 |
| Pseudomonas fluorescens FW300-N2C3 | 0.41 | AO356_10350 | | phosphoenolpyruvate-protein phosphotransferase | 0.54 | AO356_08685 | | epoxyqueuosine reductase | low | > 104 |
| Pseudomonas sp. RS175 | 0.41 | PFR28_04830 | | Phosphoenolpyruvate-dependent phosphotransferase system | 0.54 | PFR28_05115 | | Epoxyqueuosine reductase | low | > 88 |
| Alteromonas macleodii MIT1002 | 0.41 | MIT1002_00648 | | Phosphoenolpyruvate-protein phosphotransferase | 0.63 | MIT1002_03794 | | Epoxyqueuosine reductase | low | > 70 |
| Shewanella oneidensis MR-1 | 0.41 | SO1332 | ptsP | phosphoenolpyruvate-protein phosphotransferase PtsP (NCBI ptt file) | 0.63 | SO3861 | | iron-sulfur cluster-binding protein (NCBI ptt file) | low | > 76 |
| Pseudomonas sp. DMC3 | 0.41 | GFF264 | | Phosphoenolpyruvate-dependent phosphotransferase system | 0.55 | GFF3214 | | Epoxyqueuosine reductase | low | > 89 |
| Pseudomonas fluorescens FW300-N2E3 | 0.41 | AO353_08465 | | phosphoenolpyruvate-protein phosphotransferase | 0.54 | AO353_13115 | | epoxyqueuosine reductase | low | > 101 |
| Pseudomonas aeruginosa MRSN321 | 0.41 | DY961_RS21655 | ptsP;inference=COORDINATES | phosphoenolpyruvate--protein phosphotransferase | 0.55 | DY961_RS10540 | queG;go_function=4 | tRNA epoxyqueuosine(34) reductase QueG | low | > 100 |
| Pseudomonas aeruginosa PUPa3 | 0.41 | DQ20_RS37640 | ptsP;inference=COORDINATES | phosphoenolpyruvate--protein phosphotransferase | 0.56 | DQ20_RS51515 | queG;go_function=4 | tRNA epoxyqueuosine(34) reductase QueG | low | > 101 |
| Pseudomonas aeruginosa PA14 | 0.41 | IKLFDK_23750 | | phosphoenolpyruvate--protein phosphotransferase | 0.55 | IKLFDK_28790 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 98 |
| Pseudomonas syringae pv. syringae B728a | 0.41 | Psyr_4842 | | Phosphoenolpyruvate-protein phosphotransferase | 0.56 | Psyr_0566 | | 4Fe-4S cluster binding protein | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.41 | Psyr_4842 | | Phosphoenolpyruvate-protein phosphotransferase | 0.56 | Psyr_0566 | | 4Fe-4S cluster binding protein | low | > 86 |
| Acinetobacter baumannii LAC-4 | 0.38 | RR41_RS16935 | | phosphoenolpyruvate--protein phosphotransferase | 0.46 | RR41_RS11805 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 55 |
| Acinetobacter radioresistens SK82 | 0.38 | MPMX26_00341 | | Phosphoenolpyruvate-dependent phosphotransferase system | 0.47 | MPMX26_01783 | | Epoxyqueuosine reductase | low | > 36 |
| Caulobacter crescentus NA1000 | 0.25 | CCNA_00892 | | phosphoenolpyruvate-protein phosphotransferase PtsP | 0.33 | CCNA_03753 | | iron-sulfur cluster-binding protein | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.25 | CCNA_00892 | | phosphoenolpyruvate-protein phosphotransferase PtsP | 0.33 | CCNA_03753 | | iron-sulfur cluster-binding protein | low | > 67 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.25 | A4249_RS14485 | | phosphoenolpyruvate--protein phosphotransferase | 0.32 | A4249_RS11375 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 48 |
| Rhizobium sp. OAE497 | 0.25 | ABIE40_RS17300 | | phosphoenolpyruvate--protein phosphotransferase | 0.32 | ABIE40_RS01310 | | tRNA epoxyqueuosine(34) reductase QueG | — | — |
| Sinorhizobium meliloti 1021 | 0.25 | SMc02437 | | phosphoenolpyruvate phosphotransferase PTSP (enzyme I-Ntr) protein | 0.31 | SMc00406 | | 4Fe-4S ferredoxin | — | — |
| Sphingobium sp. HT1-2 | 0.24 | GFF2007 | | Phosphoenolpyruvate-protein phosphotransferase, nitrogen regulation associated | 0.31 | GFF3286 | | Epoxyqueuosine reductase (EC 1.17.99.6) QueG | low | > 95 |
| Magnetospirillum magneticum AMB-1 | 0.24 | AMB_RS08150 | | phosphoenolpyruvate--protein phosphotransferase | 0.32 | AMB_RS03995 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 64 |
| Rhodospirillum rubrum S1H | 0.23 | Rru_A0745 | | PTSINtr with GAF domain, PtsP (NCBI) | 0.33 | Rru_A0279 | | 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) | low | > 58 |
| Xanthobacter sp. DMC5 | 0.23 | GFF1659 | | Phosphoenolpyruvate-dependent phosphotransferase system | 0.32 | GFF3718 | | Epoxyqueuosine reductase | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.22 | Ga0059261_2514 | | phosphoenolpyruvate-protein phosphotransferase | 0.31 | Ga0059261_1058 | | epoxyqueuosine reductase | low | > 68 |
| Dinoroseobacter shibae DFL-12 | 0.22 | Dshi_2062 | | PTSINtr with GAF domain, PtsP (RefSeq) | 0.32 | Dshi_3307 | | domain of unknown function DUF1730 (RefSeq) | low | > 64 |
| Phaeobacter inhibens DSM 17395 | 0.22 | PGA1_c23500 | | phosphoenolpyruvate-protein phosphotransferase PtsP | 0.31 | PGA1_c34310 | | Uncharacterized Fe-S protein | low | > 62 |
Not shown: 8 genomes with orthologs for CSW01_03525 only; 34 genomes with orthologs for CSW01_01810 only