Conservation of cofitness between CSW01_12885 and CSW01_01485 in Vibrio cholerae E7946 ATCC 55056

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12885 fructose 1,6-bisphosphatase 1.0 CSW01_01485 transcriptional regulator 0.95 3
Escherichia coli ECRC62 0.76 BNILDI_07310 fbp class 1 fructose-bisphosphatase 0.52 BNILDI_02870 gntR gluconate operon transcriptional repressor GntR low > 75
Escherichia coli BW25113 0.76 b4232 fbp fructose-1,6-bisphosphatase (NCBI) 0.52 b3438 gntR DNA-binding transcriptional repressor (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_03803 Fructose-1,6-bisphosphatase class 1 0.52 OHPLBJKB_00264 HTH-type transcriptional regulator GntR low > 74
Escherichia coli ECOR38 0.76 HEPCGN_10145 fbp class 1 fructose-bisphosphatase 0.52 HEPCGN_15660 gntR gluconate operon transcriptional repressor GntR low > 88
Escherichia fergusonii Becca 0.76 EFB2_04301 Fructose-1,6-bisphosphatase class 1 0.52 EFB2_00382 HTH-type transcriptional regulator GntR low > 86
Escherichia coli ECOR27 0.76 NOLOHH_04205 fbp class 1 fructose-bisphosphatase 0.51 NOLOHH_08635 gntR gluconate operon transcriptional repressor GntR low > 76
Escherichia coli BL21 0.76 ECD_04100 fructose-1,6-bisphosphatase I 0.51 ECD_03289 d-gluconate inducible gluconate regulon transcriptional repressor low > 61
Escherichia coli Nissle 1917 0.76 ECOLIN_RS24555 class 1 fructose-bisphosphatase 0.52 ECOLIN_RS19675 gluconate operon transcriptional repressor GntR low > 55
Serratia liquefaciens MT49 0.76 IAI46_01795 class 1 fructose-bisphosphatase 0.54 IAI46_23965 gluconate operon transcriptional repressor GntR 0.94 47
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.76 GFF880 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) 0.49 GFF570 Gluconate utilization system Gnt-I transcriptional repressor low > 78
Dickeya dianthicola ME23 0.76 DZA65_RS19645 class 1 fructose-bisphosphatase 0.55 DZA65_RS20970 gluconate operon transcriptional repressor GntR low > 75
Escherichia coli ECRC100 0.76 OKFHMN_11945 fbp class 1 fructose-bisphosphatase 0.52 OKFHMN_16835 gntR gluconate operon transcriptional repressor GntR low > 79
Dickeya dianthicola 67-19 0.76 HGI48_RS18510 class 1 fructose-bisphosphatase 0.55 HGI48_RS19900 gluconate operon transcriptional repressor GntR low > 71
Escherichia coli ECRC102 0.76 NIAGMN_09795 fbp class 1 fructose-bisphosphatase 0.52 NIAGMN_14605 gntR gluconate operon transcriptional repressor GntR low > 80
Escherichia coli ECRC101 0.76 MCAODC_02450 fbp class 1 fructose-bisphosphatase 0.52 MCAODC_07365 gntR gluconate operon transcriptional repressor GntR 0.38 65
Escherichia coli ECRC99 0.76 KEDOAH_16210 fbp class 1 fructose-bisphosphatase 0.52 KEDOAH_11305 gntR gluconate operon transcriptional repressor GntR
Escherichia coli ECRC98 0.76 JDDGAC_15585 fbp class 1 fructose-bisphosphatase 0.52 JDDGAC_20465 gntR gluconate operon transcriptional repressor GntR 0.68 27
Enterobacter asburiae PDN3 0.76 EX28DRAFT_3419 Fructose-1,6-bisphosphatase 0.51 EX28DRAFT_4274 transcriptional regulator, LacI family low > 76
Enterobacter sp. TBS_079 0.76 MPMX20_00514 Fructose-1,6-bisphosphatase class 1 0.52 MPMX20_04319 HTH-type transcriptional regulator GntR low > 85
Pectobacterium carotovorum WPP14 0.76 HER17_RS02620 class 1 fructose-bisphosphatase 0.52 HER17_RS01450 gluconate operon transcriptional repressor GntR low > 75
Klebsiella pneumoniae MKP103 0.76 KDGMDA_11305 class 1 fructose-bisphosphatase 0.51 KDGMDA_07120 gluconate operon transcriptional repressor GntR 0.45 72
Klebsiella michiganensis M5al 0.76 BWI76_RS02815 fructose-bisphosphatase class I 0.51 BWI76_RS26245 transcriptional regulator low > 92
Dickeya dadantii 3937 0.75 DDA3937_RS18575 class 1 fructose-bisphosphatase 0.55 DDA3937_RS19785 gluconate operon transcriptional repressor GntR low > 74
Erwinia amylovora T8 0.75 OLJFJH_02370 class 1 fructose-bisphosphatase 0.56 OLJFJH_04280 gluconate operon transcriptional repressor GntR
Erwinia tracheiphila SCR3 0.75 LU632_RS02130 fbp class 1 fructose-bisphosphatase 0.53 LU632_RS19160 gntR gluconate operon transcriptional repressor GntR
Erwinia tracheiphila HP pepo 2.2 0.75 IJEDHG_06785 fbp class 1 fructose-bisphosphatase 0.54 IJEDHG_08040 gntR gluconate operon transcriptional repressor GntR
Rahnella sp. WP5 0.75 EX31_RS08670 class 1 fructose-bisphosphatase 0.54 EX31_RS05060 gluconate operon transcriptional repressor GntR low > 89
Pantoea agglomerans CFBP13505 P0401 0.74 PagCFBP13505_RS11345 class 1 fructose-bisphosphatase 0.50 PagCFBP13505_RS18155 gluconate operon transcriptional repressor GntR low > 74
Pantoea sp. MT58 0.74 IAI47_02750 class 1 fructose-bisphosphatase 0.52 IAI47_01650 gluconate operon transcriptional repressor GntR low > 76
Variovorax sp. OAS795 0.43 ABID97_RS12875 class 1 fructose-bisphosphatase 0.29 ABID97_RS01205 LacI family DNA-binding transcriptional regulator low > 91
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_03991 D-fructose 1,6-bisphosphatase 0.30 H281DRAFT_05920 transcriptional regulator, LacI family
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS15225 fructose-1,6-bisphosphatase class 1 0.32 BPHYT_RS00410 LacI family transcription regulator
Paraburkholderia sabiae LMG 24235 0.41 QEN71_RS03770 class 1 fructose-bisphosphatase 0.29 QEN71_RS13585 LacI family DNA-binding transcriptional regulator
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS15125 class 1 fructose-bisphosphatase 0.26 ABZR87_RS18255 LacI family DNA-binding transcriptional regulator
Acidovorax sp. GW101-3H11 0.41 Ac3H11_2634 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) 0.29 Ac3H11_3230 Gluconate utilization system Gnt-I transcriptional repressor
Herbaspirillum seropedicae SmR1 0.41 HSERO_RS17715 Fructose-1,6-bisphosphatase class 1 0.34 HSERO_RS05460 LacI family transcription regulator
Ralstonia solanacearum GMI1000 0.41 RS_RS10665 fructose 1,6-bisphosphatase 0.26 RS_RS24865 LacI family DNA-binding transcriptional regulator
Ralstonia solanacearum UW163 0.40 UW163_RS10450 class 1 fructose-bisphosphatase 0.24 UW163_RS16860 GntR family transcriptional regulator
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS03275 class 1 fructose-bisphosphatase 0.24 RALBFv3_RS16125 GntR family transcriptional regulator
Ralstonia solanacearum PSI07 0.40 RPSI07_RS14035 class 1 fructose-bisphosphatase 0.26 RPSI07_RS07575 LacI family DNA-binding transcriptional regulator
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS05195 fructose 1,6-bisphosphatase 0.26 RR42_RS22645 GntR family transcriptional regulator
Castellaniella sp019104865 MT123 0.40 ABCV34_RS02565 class 1 fructose-bisphosphatase 0.26 ABCV34_RS12285 LacI family DNA-binding transcriptional regulator
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF274 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) 0.30 GFF5509 Gluconate utilization system Gnt-I transcriptional repressor
Pseudomonas segetis P6 0.40 MPMX49_04276 Fructose-1,6-bisphosphatase class 1 0.33 MPMX49_02373 HTH-type transcriptional regulator GntR
Pseudomonas aeruginosa PA14 0.40 IKLFDK_27970 class 1 fructose-bisphosphatase 0.36 IKLFDK_11375 LacI family DNA-binding transcriptional regulator GntR
Variovorax sp. SCN45 0.39 GFF3119 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) 0.30 GFF7257 KEGG: LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Pseudomonas aeruginosa PUPa3 0.39 DQ20_RS50720 class 1 fructose-bisphosphatase 0.36 DQ20_RS59230 gntR;inference=COORDINATES LacI family DNA-binding transcriptional regulator GntR
Pseudomonas aeruginosa MRSN321 0.39 DY961_RS11375 class 1 fructose-bisphosphatase 0.36 DY961_RS17990 gntR;inference=COORDINATES LacI family DNA-binding transcriptional regulator GntR
Pseudomonas stutzeri RCH2 0.39 Psest_3956 Fructose-1,6-bisphosphatase 0.34 Psest_2126 Transcriptional regulators
Pseudomonas putida KT2440 0.39 PP_5040 fructose-1,6-bisphosphatase, class 1 0.31 PP_3415 Transcriptional regulator, LacI family
Pseudomonas sp. SVBP6 0.39 COO64_RS13370 class 1 fructose-bisphosphatase 0.34 COO64_RS25590 LacI family DNA-binding transcriptional regulator
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_1596 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) 0.35 Pf1N1B4_558 Gluconate utilization system Gnt-I transcriptional repressor
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_335 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) 0.34 PfGW456L13_1925 Gluconate utilization system Gnt-I transcriptional repressor
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_3813 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) 0.34 Pf6N2E2_2865 Gluconate utilization system Gnt-I transcriptional repressor
Pseudomonas sp. BP01 0.38 JOY50_RS09485 class 1 fructose-bisphosphatase 0.31 JOY50_RS23605 LacI family DNA-binding transcriptional regulator
Pseudomonas orientalis W4I3 0.38 QF045_RS04755 class 1 fructose-bisphosphatase 0.34 QF045_RS24095 LacI family DNA-binding transcriptional regulator
Pseudomonas simiae WCS417 0.38 PS417_01690 fructose 1,6-bisphosphatase 0.33 PS417_21990 LacI family transcriptional regulator
Pseudomonas lactucae CFBP13502 0.38 GEMAOFIL_00560 Fructose-1,6-bisphosphatase class 1 0.34 GEMAOFIL_04536 HTH-type transcriptional regulator GntR
Pseudomonas sp. DMC3 0.38 GFF4070 Fructose-1,6-bisphosphatase class 1 0.33 GFF5268 HTH-type transcriptional regulator GntR
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_09670 fructose 1,6-bisphosphatase 0.34 AO356_05065 LacI family transcriptional regulator
Pseudomonas sp. RS175 0.38 PFR28_04956 Fructose-1,6-bisphosphatase class 1 0.34 PFR28_00593 HTH-type transcriptional regulator GntR
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_12205 fructose 1,6-bisphosphatase 0.33 AO353_03255 LacI family transcriptional regulator
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_0370 D-fructose 1,6-bisphosphatase 0.32 Psyr_3336 transcriptional regulator, LacI family
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_0370 D-fructose 1,6-bisphosphatase 0.32 Psyr_3336 transcriptional regulator, LacI family
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS01745 class 1 fructose-bisphosphatase 0.34 PFLU_RS23595 LacI family DNA-binding transcriptional regulator
Pseudomonas fluorescens SBW25 0.37 PFLU_RS01745 class 1 fructose-bisphosphatase 0.34 PFLU_RS23595 LacI family DNA-binding transcriptional regulator
Azospirillum sp. SherDot2 0.37 MPMX19_02944 Fructose-1,6-bisphosphatase class 1 0.29 MPMX19_05332 HTH-type transcriptional regulator GntR low > 112
Alteromonas macleodii MIT1002 0.35 MIT1002_00169 Fructose-1,6-bisphosphatase class 1 0.31 MIT1002_03475 Gluconate utilization system GNT-I transcriptional repressor
Sinorhizobium meliloti 1021 0.31 SM_b20202 fructose-1,6-bisphosphatase 0.29 SM_b20667 LacI family transcriptional regulator low > 103
Xanthobacter sp. DMC5 0.30 GFF1141 Fructose-1,6-bisphosphatase class 1 0.31 GFF1533 HTH-type transcriptional regulator GntR

Not shown: 33 genomes with orthologs for CSW01_12885 only; 5 genomes with orthologs for CSW01_01485 only