Conservation of cofitness between CSW01_00280 and CSW01_01270 in Vibrio cholerae E7946 ATCC 55056

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00280 shikimate dehydrogenase 1.0 CSW01_01270 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 0.82 7
Pseudomonas sp. S08-1 0.57 OH686_12485 Shikimate 5-dehydrogenase I alpha 0.52 OH686_02105 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 80
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_10670 shikimate dehydrogenase 0.53 AO353_04735 mannose-1-phosphate guanylyltransferase low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_0025 shikimate dehydrogenase 0.59 Psyr_0937 mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP) 0.55 71
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_0025 shikimate dehydrogenase 0.59 Psyr_0937 mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP) low > 86
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_644 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.54 PfGW456L13_1674 Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) / Mannose-6-phosphate isomerase (EC 5.3.1.8) low > 87
Pseudomonas sp. DMC3 0.55 GFF600 Shikimate dehydrogenase (NADP(+)) 0.54 GFF1910 Alginate biosynthesis protein AlgA — —
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_1906 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.54 Pf1N1B4_993 Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) / Mannose-6-phosphate isomerase (EC 5.3.1.8) low > 87
Pseudomonas orientalis W4I3 0.55 QF045_RS03060 shikimate dehydrogenase 0.53 QF045_RS07785 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Pseudomonas sp. RS175 0.55 PFR28_04655 Shikimate dehydrogenase (NADP(+)) 0.54 PFR28_03566 Alginate biosynthesis protein AlgA — —
Pseudomonas protegens RBAN4 0.55 FABNJH_00150 aroE shikimate dehydrogenase 0.54 FABNJH_05255 algA mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Pseudomonas sp. FW215-L2 0.55 GFF396 Shikimate dehydrogenase (NADP(+)) 0.54 GFF4303 Alginate biosynthesis protein AlgA low > 111
Pseudomonas simiae WCS417 0.54 PS417_00125 shikimate dehydrogenase 0.53 PS417_04790 mannose-1-phosphate guanylyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_4130 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.54 Pf6N2E2_5377 Mannose-6-phosphate isomerase (EC 5.3.1.8) / Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) — —
Pseudomonas fluorescens SBW25 0.54 PFLU_RS00120 shikimate dehydrogenase 0.59 PFLU_RS17870 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Pseudomonas fluorescens SBW25-INTG 0.54 PFLU_RS00120 shikimate dehydrogenase 0.59 PFLU_RS17870 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Pseudomonas sp. SVBP6 0.53 COO64_RS02250 aroE shikimate dehydrogenase 0.53 COO64_RS11545 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Pseudomonas putida KT2440 0.53 PP_0074 shikimate 5-dehydrogenase 0.54 PP_1277 mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase — —
Pseudomonas stutzeri RCH2 0.53 Psest_0029 shikimate 5-dehydrogenase 0.63 Psest_1821 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Pseudomonas lactucae CFBP13502 0.53 GEMAOFIL_00231 Shikimate dehydrogenase (NADP(+)) 0.56 GEMAOFIL_02614 Mannose-1-phosphate guanylyltransferase RfbM — —
Pseudomonas sp. BP01 0.53 JOY50_RS08210 aroE shikimate dehydrogenase 0.53 JOY50_RS15405 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_11315 shikimate dehydrogenase 0.54 AO356_17260 mannose-1-phosphate guanylyltransferase low > 104
Pseudomonas segetis P6 0.52 ACVTMO_RS01390 aroE shikimate dehydrogenase 0.53 ACVTMO_RS17695 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Pseudomonas aeruginosa PA14 0.52 IKLFDK_25435 shikimate dehydrogenase 0.53 IKLFDK_18125 phosphomannose isomerase / guanosine 5'-diphospho-D-mannose pyrophosphorylase — —
Pseudomonas aeruginosa PUPa3 0.52 NPBIFN_00025 aroE shikimate dehydrogenase 0.53 NPBIFN_01441 algA phosphomannose isomerase / guanosine 5'-diphospho-D-mannose pyrophosphorylase — —
Pseudomonas aeruginosa MRSN321 0.52 PFGADD_00025 aroE shikimate dehydrogenase 0.53 PFGADD_01420 algA phosphomannose isomerase / guanosine 5'-diphospho-D-mannose pyrophosphorylase — —
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS01990 shikimate 5-dehydrogenase 0.50 HSERO_RS10000 mannose-1-phosphate guanylyltransferase low > 78
Dechlorosoma suillum PS 0.51 Dsui_0443 shikimate 5-dehydrogenase 0.41 Dsui_0087 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Marinobacter adhaerens HP15 0.50 HP15_3750 shikimate dehydrogenase 0.59 HP15_444 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Pantoea agglomerans CFBP13505 P0401 0.50 PagCFBP13516_RS02330 aroE shikimate dehydrogenase 0.61 PagCFBP13516_RS07370 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Enterobacter asburiae PDN3 0.50 EX28DRAFT_0046 shikimate dehydrogenase 0.58 EX28DRAFT_0506 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 76
Enterobacter sp. TBS_079 0.49 MPMX20_04189 Shikimate dehydrogenase (NADP(+)) 0.58 MPMX20_03031 Mannose-1-phosphate guanylyltransferase 1 low > 85
Escherichia coli Nissle 1917 0.48 ECOLIN_RS18840 shikimate dehydrogenase 0.60 ECOLIN_RS12075 mannose-1-phosphate guanyltransferase low > 55
Serratia liquefaciens MT49 0.48 IAI46_23240 shikimate dehydrogenase 0.61 IAI46_08070 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 87
Escherichia coli ECRC98 0.48 JDDGAC_21185 aroE shikimate dehydrogenase 0.60 JDDGAC_28475 manC mannose-1-phosphate guanylyltransferase ManC low > 87
Escherichia coli ECRC99 0.48 KEDOAH_10585 aroE shikimate dehydrogenase 0.60 KEDOAH_03785 manC mannose-1-phosphate guanylyltransferase ManC — —
Escherichia coli ECRC101 0.48 MCAODC_08085 aroE shikimate dehydrogenase 0.60 MCAODC_20575 manC mannose-1-phosphate guanylyltransferase ManC low > 87
Escherichia coli ECRC100 0.48 OKFHMN_17565 aroE shikimate dehydrogenase 0.60 OKFHMN_24365 manC mannose-1-phosphate guanylyltransferase ManC low > 79
Escherichia coli ECRC102 0.48 NIAGMN_15325 aroE shikimate dehydrogenase 0.60 NIAGMN_22310 manC mannose-1-phosphate guanylyltransferase ManC low > 80
Escherichia coli ECOR27 0.48 NOLOHH_09355 aroE shikimate dehydrogenase 0.60 NOLOHH_15695 manC mannose-1-phosphate guanylyltransferase ManC low > 75
Escherichia coli ECOR38 0.48 HEPCGN_16385 aroE shikimate dehydrogenase 0.60 HEPCGN_03065 manC mannose-1-phosphate guanylyltransferase ManC low > 88
Escherichia coli ECRC62 0.48 BNILDI_02165 aroE shikimate dehydrogenase 0.60 BNILDI_14605 manC mannose-1-phosphate guanylyltransferase ManC low > 75
Escherichia coli BL21 0.48 ECD_03132 dehydroshikimate reductase, NAD(P)-binding 0.60 ECD_01955 mannose-1-phosphate guanyltransferase low > 61
Escherichia coli BW25113 0.48 b3281 aroE dehydroshikimate reductase, NAD(P)-binding (NCBI) 0.60 b2049 cpsB mannose-1-phosphate guanyltransferase (NCBI) low > 76
Klebsiella pneumoniae MRSN742743 0.48 GJGHJB_00433 aroE shikimate dehydrogenase 0.59 GJGHJB_01668 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 83
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_00422 Shikimate dehydrogenase (NADP(+)) 0.58 OHPLBJKB_01666 Mannose-1-phosphate guanylyltransferase 1 low > 74
Escherichia fergusonii Becca 0.47 EFB2_00542 Shikimate dehydrogenase (NADP(+)) 0.60 EFB2_01805 Mannose-1-phosphate guanylyltransferase 1 low > 86
Rahnella sp. WP5 0.47 EX31_RS15950 shikimate dehydrogenase 0.59 EX31_RS02880 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF2397 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.59 GFF3879 Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) / Mannose-6-phosphate isomerase (EC 5.3.1.8) low > 78
Collimonas humicola GW821-FHT01A05 0.45 MPMX01_00904 Shikimate dehydrogenase (NADP(+)) 0.52 MPMX01_01717 Alginate biosynthesis protein AlgA — —
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS16975 shikimate 5-dehydrogenase 0.51 BPHYT_RS09705 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 109
Paraburkholderia graminis OAS925 0.45 ABIE53_003560 shikimate dehydrogenase 0.50 ABIE53_002179 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS27130 shikimate dehydrogenase 0.57 QEN71_RS25610 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_06291 shikimate dehydrogenase (EC 1.1.1.25) 0.56 H281DRAFT_04847 mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22)/mannose-6-phosphate isomerase, type 2 (EC 5.3.1.8) — —
Pectobacterium carotovorum WPP14 0.44 HER17_RS02250 shikimate dehydrogenase 0.59 HER17_RS14525 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 75
Ralstonia solanacearum PSI07 0.44 RPSI07_RS11300 shikimate dehydrogenase 0.39 RPSI07_RS19805 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 81
Dickeya dianthicola ME23 0.43 DZA65_RS20315 shikimate dehydrogenase 0.59 DZA65_RS19720 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Dickeya dianthicola 67-19 0.43 HGI48_RS19190 shikimate dehydrogenase 0.59 HGI48_RS18585 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Dickeya dadantii 3937 0.43 DDA3937_RS19100 shikimate dehydrogenase 0.59 DDA3937_RS18655 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF5226 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.48 GFF90 Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) low > 92
Methylophilus sp. DMC18 0.40 GFF2019 Shikimate dehydrogenase (NADP(+)) 0.49 GFF703 Mannose-1-phosphate guanylyltransferase 1 — —
Castellaniella sp019104865 MT123 0.39 ABCV34_RS11620 shikimate dehydrogenase 0.46 ABCV34_RS12925 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 48
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS17645 shikimate dehydrogenase 0.51 RR42_RS33245 mannose-1-phosphate guanyltransferase 0.41 53
Alteromonas macleodii MIT1002 0.36 MIT1002_00029 Shikimate dehydrogenase 0.59 MIT1002_03581 Mannose-1-phosphate guanylyltransferase 1 — —
Variovorax sp. SCN45 0.34 GFF4456 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.43 GFF70 Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13) / Mannose-6-phosphate isomerase (EC 5.3.1.8) low > 127
Rhodanobacter denitrificans MT42 0.34 LRK55_RS08360 shikimate dehydrogenase 0.51 LRK55_RS05440 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 63
Rhodanobacter denitrificans FW104-10B01 0.34 LRK54_RS08595 shikimate dehydrogenase 0.51 LRK54_RS05685 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 59
Xanthomonas campestris pv. campestris strain 8004 0.34 Xcc-8004.5020.1 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.54 Xcc-8004.4481.1 hypothetical protein low > 74
Dyella japonica UNC79MFTsu3.2 0.32 ABZR86_RS14985 shikimate dehydrogenase 0.50 ABZR86_RS18715 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 74
Variovorax sp. OAS795 0.32 ABID97_RS06300 shikimate dehydrogenase 0.42 ABID97_RS19170 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Rhodanobacter sp000427505 FW510-R12 0.32 LRK53_RS02375 shikimate dehydrogenase 0.51 LRK53_RS04345 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase — —
Rhodanobacter sp. FW510-T8 0.31 OKGIIK_15365 aroE shikimate dehydrogenase 0.51 OKGIIK_01155 cpsB mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 53
Lysobacter sp. OAE881 0.30 ABIE51_RS01815 shikimate dehydrogenase 0.45 ABIE51_RS04370 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase low > 62

Not shown: 18 genomes with orthologs for CSW01_00280 only; 14 genomes with orthologs for CSW01_01270 only