Conservation of cofitness between BPHYT_RS13220 and BPHYT_RS03535 in Burkholderia phytofirmans PsJN

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS13220 phosphomethylpyrimidine synthase 1.0 BPHYT_RS03535 phospho-2-dehydro-3-deoxyheptonate aldolase 0.80 1
Paraburkholderia graminis OAS925 0.99 ABIE53_002857 phosphomethylpyrimidine synthase 0.98 ABIE53_000850 3-deoxy-7-phosphoheptulonate synthase 0.53 33
Paraburkholderia bryophila 376MFSha3.1 0.98 H281DRAFT_00395 hydroxymethylpyrimidine synthase 0.98 H281DRAFT_04687 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase low > 103
Paraburkholderia sabiae LMG 24235 0.95 QEN71_RS05480 phosphomethylpyrimidine synthase ThiC 0.96 QEN71_RS26560 3-deoxy-7-phosphoheptulonate synthase AroG low > 153
Herbaspirillum seropedicae SmR1 0.85 HSERO_RS02120 phosphomethylpyrimidine synthase ThiC 0.83 HSERO_RS07160 phospho-2-dehydro-3-deoxyheptonate aldolase low > 78
Dechlorosoma suillum PS 0.85 Dsui_0422 thiamine biosynthesis protein ThiC 0.72 Dsui_3444 phospho-2-dehydro-3-deoxyheptonate aldolase — —
Castellaniella sp019104865 MT123 0.78 ABCV34_RS10825 phosphomethylpyrimidine synthase ThiC 0.71 ABCV34_RS06825 3-deoxy-7-phosphoheptulonate synthase AroG — —
Dyella japonica UNC79MFTsu3.2 0.75 ABZR86_RS17230 phosphomethylpyrimidine synthase ThiC 0.67 ABZR86_RS00390 3-deoxy-7-phosphoheptulonate synthase low > 74
Rhodanobacter sp. FW510-T8 0.74 OKGIIK_16965 thiC phosphomethylpyrimidine synthase ThiC 0.67 OKGIIK_09785 3-deoxy-7-phosphoheptulonate synthase low > 52
Pseudomonas sp. S08-1 0.74 OH686_15885 phosphomethylpyrimidine synthase 0.47 OH686_01760 3-deoxy-7-phosphoheptulonate synthase low > 80
Pseudomonas stutzeri RCH2 0.74 Psest_0477 thiamine biosynthesis protein ThiC 0.47 Psest_2331 phospho-2-dehydro-3-deoxyheptonate aldolase low > 67
Xanthomonas campestris pv. campestris strain 8004 0.74 Xcc-8004.1066.1 hypothetical protein 0.66 Xcc-8004.704.1 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) low > 74
Acinetobacter radioresistens SK82 0.71 MPMX26_00180 Phosphomethylpyrimidine synthase 0.49 MPMX26_01673 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive low > 36
Ralstonia solanacearum PSI07 0.69 RPSI07_RS23420 phosphomethylpyrimidine synthase ThiC 0.85 RPSI07_RS11845 3-deoxy-7-phosphoheptulonate synthase — —
Pectobacterium carotovorum WPP14 0.69 HER17_RS20380 phosphomethylpyrimidine synthase ThiC 0.67 HER17_RS14805 3-deoxy-7-phosphoheptulonate synthase AroG low > 75
Shewanella loihica PV-4 0.69 Shew_2096 thiamine biosynthesis protein ThiC (RefSeq) 0.65 Shew_0851 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) low > 60
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS04785 phosphomethylpyrimidine synthase ThiC 0.86 ABZR87_RS01110 3-deoxy-7-phosphoheptulonate synthase AroG 0.73 1
Cupriavidus basilensis FW507-4G11 0.68 RR42_RS01290 thiamine biosynthesis protein ThiC 0.85 RR42_RS05860 phospho-2-dehydro-3-deoxyheptonate aldolase 0.78 19
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS09940 phosphomethylpyrimidine synthase ThiC 0.84 RALBFv3_RS05460 3-deoxy-7-phosphoheptulonate synthase low > 76
Ralstonia solanacearum UW163 0.68 UW163_RS03640 phosphomethylpyrimidine synthase ThiC 0.84 UW163_RS08165 3-deoxy-7-phosphoheptulonate synthase — —
Shewanella amazonensis SB2B 0.68 Sama_1860 thiamine biosynthesis protein ThiC (RefSeq) 0.60 Sama_0657 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) low > 62
Rahnella sp. WP5 0.68 EX31_RS16815 phosphomethylpyrimidine synthase ThiC 0.66 EX31_RS23545 3-deoxy-7-phosphoheptulonate synthase AroG low > 89
Ralstonia solanacearum GMI1000 0.68 RS_RS00555 phosphomethylpyrimidine synthase 0.85 RS_RS13320 3-deoxy-7-phosphoheptulonate synthase 0.48 36
Enterobacter sp. TBS_079 0.68 MPMX20_00217 Phosphomethylpyrimidine synthase 0.65 MPMX20_01381 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF4198 Thiamin biosynthesis protein ThiC 0.66 GFF8 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) — —
Enterobacter asburiae PDN3 0.67 EX28DRAFT_4536 phosphomethylpyrimidine synthase 0.65 EX28DRAFT_2241 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) low > 76
Serratia liquefaciens MT49 0.67 IAI46_01320 phosphomethylpyrimidine synthase ThiC 0.67 IAI46_06405 3-deoxy-7-phosphoheptulonate synthase AroG low > 86
Escherichia coli Nissle 1917 0.67 ECOLIN_RS23040 phosphomethylpyrimidine synthase ThiC 0.66 ECOLIN_RS04015 3-deoxy-7-phosphoheptulonate synthase AroG — —
Kangiella aquimarina DSM 16071 0.67 B158DRAFT_0295 hydroxymethylpyrimidine synthase 0.47 B158DRAFT_1384 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) low > 40
Escherichia fergusonii Becca 0.67 EFB2_04617 Phosphomethylpyrimidine synthase 0.66 EFB2_03352 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive low > 86
Escherichia coli ECOR27 0.67 NOLOHH_05520 thiC phosphomethylpyrimidine synthase ThiC 0.66 NOLOHH_23170 aroG 3-deoxy-7-phosphoheptulonate synthase AroG low > 75
Escherichia coli ECRC102 0.67 NIAGMN_11125 thiC phosphomethylpyrimidine synthase ThiC 0.66 NIAGMN_04790 aroG 3-deoxy-7-phosphoheptulonate synthase AroG — —
Escherichia coli ECRC99 0.67 KEDOAH_14785 thiC phosphomethylpyrimidine synthase ThiC 0.66 KEDOAH_21225 aroG 3-deoxy-7-phosphoheptulonate synthase AroG — —
Escherichia coli ECRC101 0.67 MCAODC_03875 thiC phosphomethylpyrimidine synthase ThiC 0.66 MCAODC_25960 aroG 3-deoxy-7-phosphoheptulonate synthase AroG low > 87
Escherichia coli ECRC62 0.67 BNILDI_06005 thiC phosphomethylpyrimidine synthase ThiC 0.66 BNILDI_21165 aroG 3-deoxy-7-phosphoheptulonate synthase AroG low > 75
Escherichia coli ECRC100 0.67 OKFHMN_13375 thiC phosphomethylpyrimidine synthase ThiC 0.66 OKFHMN_06740 aroG 3-deoxy-7-phosphoheptulonate synthase AroG low > 80
Escherichia coli ECRC98 0.67 JDDGAC_17000 thiC phosphomethylpyrimidine synthase ThiC 0.66 JDDGAC_10395 aroG 3-deoxy-7-phosphoheptulonate synthase AroG low > 86
Escherichia coli BW25113 0.67 b3994 thiC thiamine biosynthesis protein ThiC (NCBI) 0.66 b0754 aroG 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_04056 Phosphomethylpyrimidine synthase 0.66 OHPLBJKB_02959 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive low > 73
Escherichia coli BL21 0.67 ECD_03871 phosphomethylpyrimidine synthase 0.66 ECD_00707 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible low > 61
Escherichia coli ECOR38 0.67 HEPCGN_12010 thiC phosphomethylpyrimidine synthase ThiC 0.66 HEPCGN_01535 aroG 3-deoxy-7-phosphoheptulonate synthase AroG low > 87
Klebsiella michiganensis M5al 0.67 BWI76_RS01555 phosphomethylpyrimidine synthase ThiC 0.65 BWI76_RS08600 3-deoxy-7-phosphoheptulonate synthase low > 92
Pantoea sp. MT58 0.67 IAI47_18085 phosphomethylpyrimidine synthase ThiC 0.65 IAI47_13605 3-deoxy-7-phosphoheptulonate synthase AroG low > 76
Dickeya dadantii 3937 0.67 DDA3937_RS01175 phosphomethylpyrimidine synthase ThiC 0.66 DDA3937_RS06560 3-deoxy-7-phosphoheptulonate synthase AroG low > 74
Erwinia tracheiphila SCR3 0.67 LU632_RS00970 thiC phosphomethylpyrimidine synthase ThiC 0.64 LU632_RS15925 aroG 3-deoxy-7-phosphoheptulonate synthase AroG low > 74
Variovorax sp. SCN45 0.67 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) 0.64 GFF4447 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphat e synthase I alpha (EC 2.5.1.54) low > 127
Shewanella oneidensis MR-1 0.67 SO2445 thiC thiamin biosynthesis protein ThiC (NCBI ptt file) 0.64 SO0756 aroG phospho-2-dehydro-3-deoxyheptonate aldolase, phe-sensitive (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_00335 phosphomethylpyrimidine synthase 0.64 CSW01_19270 3-deoxy-7-phosphoheptulonate synthase low > 62
Shewanella sp. ANA-3 0.66 Shewana3_1936 thiamine biosynthesis protein ThiC (RefSeq) 0.65 Shewana3_3528 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) low > 73
Dickeya dianthicola ME23 0.66 DZA65_RS01215 phosphomethylpyrimidine synthase ThiC 0.67 DZA65_RS06960 3-deoxy-7-phosphoheptulonate synthase AroG low > 75
Dickeya dianthicola 67-19 0.66 HGI48_RS01170 phosphomethylpyrimidine synthase ThiC 0.66 HGI48_RS06605 3-deoxy-7-phosphoheptulonate synthase AroG low > 71
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF4626 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.62 GFF581 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) low > 90
Variovorax sp. OAS795 0.65 ABID97_RS25235 phosphomethylpyrimidine synthase ThiC 0.64 ABID97_RS06345 3-deoxy-7-phosphoheptulonate synthase low > 91
Acidovorax sp. GW101-3H11 0.65 Ac3H11_2027 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.63 Ac3H11_4034 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.94 6
Caulobacter crescentus NA1000 Δfur 0.61 CCNA_02109 thiamine biosynthesis protein thiC 0.65 CCNA_01463 3-deoxy-7-phosphoheptulonate synthase low > 67
Caulobacter crescentus NA1000 0.61 CCNA_02109 thiamine biosynthesis protein thiC 0.65 CCNA_01463 3-deoxy-7-phosphoheptulonate synthase low > 66
Rhodopseudomonas palustris CGA009 0.60 TX73_018540 phosphomethylpyrimidine synthase ThiC 0.63 TX73_000140 3-deoxy-7-phosphoheptulonate synthase low > 86

Not shown: 37 genomes with orthologs for BPHYT_RS13220 only; 4 genomes with orthologs for BPHYT_RS03535 only