Conservation of cofitness between BPHYT_RS19340 and BPHYT_RS02665 in Burkholderia phytofirmans PsJN

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS19340 L-serine ammonia-lyase (EC 4.3.1.17) (from data) 1.0 BPHYT_RS02665 MFS transporter 0.30 13
Paraburkholderia bryophila 376MFSha3.1 0.97 H281DRAFT_02407 L-serine ammonia-lyase 0.94 H281DRAFT_01990 cytochrome c oxidase subunit 3 0.54 43
Paraburkholderia graminis OAS925 0.97 ABIE53_000240 L-serine dehydratase 0.93 ABIE53_000678 cytochrome c oxidase subunit 3 low > 113
Paraburkholderia sabiae LMG 24235 0.93 QEN71_RS29225 L-serine ammonia-lyase 0.86 QEN71_RS01520 cytochrome c oxidase subunit 3 low > 153
Ralstonia solanacearum PSI07 0.80 RPSI07_RS08570 L-serine ammonia-lyase 0.65 RPSI07_RS22340 cytochrome c oxidase subunit 3 low > 81
Cupriavidus basilensis FW507-4G11 0.78 RR42_RS20080 L-serine ammonia-lyase (EC 4.3.1.17) (from data) 0.61 RR42_RS01895 MFS transporter low > 128
Ralstonia solanacearum GMI1000 0.78 RS_RS16515 L-serine ammonia-lyase 0.65 RS_RS01805 cytochrome c oxidase subunit 3 low > 80
Ralstonia sp. UNC404CL21Col 0.77 ABZR87_RS03940 L-serine ammonia-lyase 0.65 ABZR87_RS06820 cytochrome c oxidase subunit 3 low > 80
Ralstonia solanacearum IBSBF1503 0.77 RALBFv3_RS08665 L-serine ammonia-lyase 0.65 RALBFv3_RS10965 cytochrome c oxidase subunit 3 low > 76
Ralstonia solanacearum UW163 0.77 UW163_RS04945 L-serine ammonia-lyase 0.65 UW163_RS02615 cytochrome c oxidase subunit 3 — —
Pseudomonas fluorescens FW300-N1B4 0.68 Pf1N1B4_622 L-serine dehydratase (EC 4.3.1.17) 0.48 Pf1N1B4_1857 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) low > 87
Pseudomonas putida KT2440 0.68 PP_0987 L-serine dehydratase 0.44 PP_0106 cytochrome c oxidase subunit 3 low > 96
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_5557 L-serine ammonia-lyase (EC 4.3.1.17) (from data) 0.47 Pf6N2E2_4101 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) low > 103
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_1867 L-serine dehydratase (EC 4.3.1.17) 0.48 PfGW456L13_611 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) 0.27 36
Pseudomonas sp. RS175 0.68 PFR28_03384 L-serine dehydratase 2 0.47 PFR28_04688 Cytochrome c oxidase subunit 3 low > 88
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_03505 serine dehydratase 0.47 AO353_10845 MFS transporter low > 101
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_18165 serine dehydratase 0.47 AO356_11175 MFS transporter low > 104
Pseudomonas sp. S08-1 0.67 OH686_16810 L-serine ammonia-lyase 0.44 OH686_12310 Cytochrome c oxidase polypeptide III low > 80
Pseudomonas fluorescens SBW25 0.67 PFLU_RS24005 L-serine ammonia-lyase 0.47 PFLU_RS00305 cytochrome c oxidase subunit 3 low > 109
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS24005 L-serine ammonia-lyase 0.47 PFLU_RS00305 cytochrome c oxidase subunit 3 low > 109
Pseudomonas simiae WCS417 0.66 PS417_22365 serine dehydratase 0.47 PS417_00315 MFS transporter low > 88
Pseudomonas stutzeri RCH2 0.65 Psest_0784 L-serine dehydratase, iron-sulfur-dependent, single chain form 0.43 Psest_4329 Heme/copper-type cytochrome/quinol oxidase, subunit 3 low > 67
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS19060 L-serine ammonia-lyase 0.37 ABZR86_RS12920 cytochrome c oxidase subunit 3 low > 74
Rhodanobacter denitrificans MT42 0.64 LRK55_RS05035 L-serine ammonia-lyase 0.38 LRK55_RS06850 cytochrome c oxidase subunit 3 low > 63
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS05255 L-serine ammonia-lyase 0.38 LRK54_RS07110 cytochrome c oxidase subunit 3 low > 59
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_01565 sdaA L-serine ammonia-lyase 0.38 OKGIIK_16530 cyoC cytochrome c oxidase subunit 3 low > 52
Xanthomonas campestris pv. campestris strain 8004 0.63 Xcc-8004.1601.1 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) 0.46 Xcc-8004.4842.1 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) low > 74
Lysobacter sp. OAE881 0.63 ABIE51_RS16145 L-serine ammonia-lyase 0.48 ABIE51_RS19190 cytochrome c oxidase subunit 3 low > 62
Variovorax sp. SCN45 0.61 GFF3439 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) 0.58 GFF2302 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) low > 127
Kangiella aquimarina DSM 16071 0.61 B158DRAFT_1339 L-serine dehydratase, iron-sulfur-dependent, single chain form 0.36 B158DRAFT_0134 Heme/copper-type cytochrome/quinol oxidase, subunit 3 low > 40
Castellaniella sp019104865 MT123 0.58 ABCV34_RS14845 L-serine ammonia-lyase 0.60 ABCV34_RS13255 cytochrome c oxidase subunit 3 low > 48
Shewanella loihica PV-4 0.55 Shew_1625 L-serine dehydratase 1 (RefSeq) 0.43 Shew_0122 cytochrome c oxidase, subunit III (RefSeq) low > 60
Shewanella sp. ANA-3 0.55 Shewana3_2295 L-serine ammonia-lyase (RefSeq) 0.37 Shewana3_3994 cytochrome c oxidase, subunit III (RefSeq) low > 73
Shewanella oneidensis MR-1 0.55 SO2248 sdaA L-serine dehydratase 1 (NCBI ptt file) 0.38 SO4609 cytochrome c oxidase subunit III (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.53 Sama_1325 L-serine ammonia-lyase (RefSeq) 0.38 Sama_3486 cytochrome c oxidase subunit III (RefSeq) low > 62
Caulobacter crescentus NA1000 Δfur 0.49 CCNA_03206 L-serine dehydratase 0.28 CCNA_03513 cytochrome c oxidase subunit III coxC low > 67
Caulobacter crescentus NA1000 0.49 CCNA_03206 L-serine dehydratase 0.28 CCNA_03513 cytochrome c oxidase subunit III coxC 0.77 20
Sphingomonas koreensis DSMZ 15582 0.48 Ga0059261_0220 L-serine dehydratase, iron-sulfur-dependent, single chain form 0.22 Ga0059261_2002 Heme/copper-type cytochrome/quinol oxidase, subunit 3 low > 68
Phaeobacter inhibens DSM 17395 0.44 PGA1_c23770 L-serine dehydratase TdcG 0.25 PGA1_c06290 cytochrome c oxidase subunit 3 — —

Not shown: 36 genomes with orthologs for BPHYT_RS19340 only; 14 genomes with orthologs for BPHYT_RS02665 only