| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Kangiella aquimarina DSM 16071 | 1.0 | B158DRAFT_2532 | | Pseudouridylate synthases, 23S RNA-specific | 1.0 | B158DRAFT_2054 | | ribosomal protein L25, Ctc-form | 0.79 | 11 |
| Pseudomonas stutzeri RCH2 | 0.54 | Psest_0709 | | pseudouridine synthase, RluA family | 0.46 | Psest_1105 | | ribosomal protein L25, Ctc-form | — | — |
| Marinobacter adhaerens HP15 | 0.53 | HP15_527 | | pseudouridine synthase, RluA family | 0.43 | HP15_706 | | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.53 | PFLU_RS03870 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | 0.43 | PFLU_RS03620 | | 50S ribosomal protein L25/general stress protein Ctc | — | — |
| Pseudomonas fluorescens SBW25 | 0.53 | PFLU_RS03870 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | 0.43 | PFLU_RS03620 | | 50S ribosomal protein L25/general stress protein Ctc | — | — |
| Alteromonas macleodii MIT1002 | 0.53 | MIT1002_02679 | | Ribosomal large subunit pseudouridine synthase D | 0.50 | MIT1002_01506 | | General stress protein CTC | — | — |
| Pseudomonas simiae WCS417 | 0.53 | PS417_03820 | | ribosomal large subunit pseudouridine synthase D | 0.41 | PS417_03570 | | 50S ribosomal protein L25 | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.53 | AO356_15925 | | ribosomal large subunit pseudouridine synthase D | 0.45 | AO356_16460 | | 50S ribosomal protein L25 | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.53 | AO353_14220 | | ribosomal large subunit pseudouridine synthase D | 0.46 | AO353_14750 | | 50S ribosomal protein L25 | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.53 | PfGW456L13_1493 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | 0.45 | PfGW456L13_1576 | | LSU ribosomal protein L25p | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.52 | Psyr_0726 | | ribosomal large subunit pseudouridine synthase D | 0.46 | Psyr_0943 | | LSU ribosomal protein L25P | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.52 | Psyr_0726 | | ribosomal large subunit pseudouridine synthase D | 0.46 | Psyr_0943 | | LSU ribosomal protein L25P | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.52 | Pf1N1B4_2822 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | 0.46 | Pf1N1B4_2914 | | LSU ribosomal protein L25p | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.52 | Pf6N2E2_5127 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | 0.45 | Pf6N2E2_5215 | | LSU ribosomal protein L25p | — | — |
| Pseudomonas sp. RS175 | 0.52 | PFR28_03748 | | Ribosomal large subunit pseudouridine synthase D | 0.43 | PFR28_03662 | | 50S ribosomal protein L25 | — | — |
| Pseudomonas putida KT2440 | 0.52 | PP_0623 | | 23S rRNA pseudouridine(1911,1915,1917) synthase | 0.41 | PP_0721 | | 50S ribosomal protein L25 | — | — |
| Pseudomonas sp. S08-1 | 0.51 | OH686_16410 | | LSU rRNA pseudouridine(1911/1915/1917) synthase | 0.47 | OH686_07955 | | ribosomal protein L25, Ctc-form | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.48 | Xcc-8004.1362.1 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | 0.42 | Xcc-8004.4170.1 | | LSU ribosomal protein L25p | low | > 74 |
| Lysobacter sp. OAE881 | 0.47 | ABIE51_RS04885 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | 0.47 | ABIE51_RS05735 | | 50S ribosomal protein L25/general stress protein Ctc | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.45 | ABZR86_RS10965 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | 0.43 | ABZR86_RS22020 | | 50S ribosomal protein L25/general stress protein Ctc | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.44 | LRK54_RS04965 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | 0.41 | LRK54_RS03685 | | 50S ribosomal protein L25/general stress protein Ctc | — | — |
| Rhodanobacter denitrificans MT42 | 0.44 | LRK55_RS04745 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | 0.41 | LRK55_RS03435 | | 50S ribosomal protein L25/general stress protein Ctc | — | — |
| Rhodanobacter sp. FW510-T8 | 0.43 | OKGIIK_01790 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | 0.41 | OKGIIK_10575 | rplY | 50S ribosomal protein L25/general stress protein Ctc | — | — |
| Ralstonia solanacearum UW163 | 0.40 | UW163_RS14830 | | RluA family pseudouridine synthase | 0.41 | UW163_RS02485 | | 50S ribosomal protein L25 | — | — |
| Ralstonia solanacearum GMI1000 | 0.40 | RS_RS08205 | | RluA family pseudouridine synthase | 0.41 | RS_RS01945 | | 50S ribosomal protein L25 | — | — |
| Ralstonia solanacearum PSI07 | 0.40 | RPSI07_RS15970 | | RluA family pseudouridine synthase | 0.41 | RPSI07_RS22205 | | 50S ribosomal protein L25 | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.40 | RALBFv3_RS01520 | | RluA family pseudouridine synthase | 0.41 | RALBFv3_RS11095 | | 50S ribosomal protein L25 | — | — |
| Ralstonia sp. UNC404CL21Col | 0.39 | ABZR87_RS13315 | | RluA family pseudouridine synthase | 0.41 | ABZR87_RS06985 | | 50S ribosomal protein L25/general stress protein Ctc | — | — |
| Rhodospirillum rubrum S1H | 0.37 | Rru_A1111 | | Pseudouridine synthase, RluD (NCBI) | 0.29 | Rru_A3746 | | Ribosomal protein L25 (NCBI) | — | — |
| Rhizobium sp. OAE497 | 0.35 | ABIE40_RS14790 | | RluA family pseudouridine synthase | 0.29 | ABIE40_RS13065 | | 50S ribosomal protein L25/general stress protein Ctc | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.35 | Ga0059261_0664 | | pseudouridine synthase, RluA family | 0.25 | Ga0059261_3232 | | ribosomal protein L25, Ctc-form | — | — |
| Sinorhizobium meliloti 1021 | 0.35 | SMc00647 | | ribosomal large subunit pseudouridine synthase | 0.28 | SMc02692 | | 50S ribosomal protein L25 | — | — |
| Azospirillum sp. SherDot2 | 0.35 | MPMX19_05442 | | Ribosomal large subunit pseudouridine synthase D | 0.30 | MPMX19_01639 | | 50S ribosomal protein L25 | — | — |
| Rhodopseudomonas palustris CGA009 | 0.34 | TX73_001905 | | RluA family pseudouridine synthase | 0.21 | TX73_022580 | | 50S ribosomal protein L25/general stress protein Ctc | — | — |
| Phaeobacter inhibens DSM 17395 | 0.33 | PGA1_c09000 | | ribosomal large subunit pseudouridine synthase D | 0.26 | PGA1_c04910 | | 50S ribosomal protein L25 | — | — |
| Agrobacterium fabrum C58 | 0.33 | Atu2443 | | ribosomal large subunit pseudouridine synthase, RluD subfamily | 0.28 | Atu2227 | | 50S ribosomal protein L25 | — | — |
| Bosea sp. OAE506 | 0.32 | ABIE41_RS05635 | | RluA family pseudouridine synthase | 0.27 | ABIE41_RS11325 | | 50S ribosomal protein L25/general stress protein Ctc | — | — |
| Magnetospirillum magneticum AMB-1 | 0.32 | AMB_RS16095 | | RluA family pseudouridine synthase | 0.28 | AMB_RS21995 | | 50S ribosomal protein L25 | — | — |
| Castellaniella sp019104865 MT123 | 0.32 | ABCV34_RS01885 | | RluA family pseudouridine synthase | 0.34 | ABCV34_RS09235 | | 50S ribosomal protein L25/general stress protein Ctc | low | > 48 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.31 | GFF4870 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | 0.33 | GFF820 | | LSU ribosomal protein L25p | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.30 | CCNA_00485 | | ribosomal large subunit pseudouridine synthase D | 0.26 | CCNA_00518 | | LSU ribosomal protein L25P | low | > 67 |
| Acidovorax sp. GW101-3H11 | 0.30 | Ac3H11_1787 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | 0.31 | Ac3H11_3451 | | LSU ribosomal protein L25p | low | > 79 |
| Caulobacter crescentus NA1000 | 0.30 | CCNA_00485 | | ribosomal large subunit pseudouridine synthase D | 0.26 | CCNA_00518 | | LSU ribosomal protein L25P | low | > 66 |
| Dinoroseobacter shibae DFL-12 | 0.30 | Dshi_2610 | | pseudouridine synthase, RluA family (RefSeq) | 0.29 | Dshi_0950 | | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 (RefSeq) | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.29 | CA264_15205 | | RNA pseudouridine synthase | 0.20 | CA264_00585 | | 50S ribosomal protein L25/general stress protein Ctc | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.27 | A4249_RS10060 | | RluA family pseudouridine synthase | 0.22 | A4249_RS09005 | | 50S ribosomal protein L25/general stress protein Ctc | — | — |
| Mycobacterium tuberculosis H37Rv | 0.20 | Rv1540 | | Conserved hypothetical protein member of yabO/yceC/yfiI family | 0.16 | Rv1015c | | 50S ribosomal protein L25 RplY | — | — |
Not shown: 46 genomes with orthologs for B158DRAFT_2532 only; 8 genomes with orthologs for B158DRAFT_2054 only