| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Kangiella aquimarina DSM 16071 | 1.0 | B158DRAFT_2215 | | Na+/H+-dicarboxylate symporters | 1.0 | B158DRAFT_0227 | | TRAP transporter, DctM subunit | 0.66 | 5 |
| Alteromonas macleodii MIT1002 | 0.48 | MIT1002_01702 | | Glutamate-aspartate carrier protein | 0.12 | MIT1002_02428 | | Neu5Ac permease | low | > 70 |
| Shewanella amazonensis SB2B | 0.45 | Sama_1319 | | symporter for L-glutamate, L-glutamine, and L-aspartate (from data) | 0.54 | Sama_2543 | | C4 dicarboxylate ABC transporter permease (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.45 | Shew_2227 | | sodium:dicarboxylate symporter (RefSeq) | 0.15 | Shew_1444 | | dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), large permease component (from data) | low | > 60 |
| Shewanella sp. ANA-3 | 0.45 | Shewana3_1726 | | sodium:dicarboxylate symporter (RefSeq) | 0.15 | Shewana3_1414 | | TRAP dicarboxylate transporter, DctM subunit (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.44 | SO1948 | | sodium:dicarboxylate symporter family protein (NCBI ptt file) | 0.17 | SO3136 | dctM | C4-dicarboxylate transport protein (NCBI ptt file) | low | > 76 |
| Pseudomonas stutzeri RCH2 | 0.38 | Psest_4075 | | symporter for L-glutamate, L-glutamine, and L-proline (from data) | 0.57 | Psest_4013 | | TRAP transporter, DctM subunit | low | > 67 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.31 | Echvi_1519 | | Na+/H+-dicarboxylate symporters | 0.14 | Echvi_3627 | | TRAP transporter, DctM subunit | low | > 79 |
| Vibrio cholerae E7946 ATCC 55056 | 0.27 | CSW01_05920 | | dicarboxylate/amino acid:cation symporter | 0.46 | CSW01_06440 | | C4-dicarboxylate ABC transporter | low | > 62 |
| Lysobacter sp. OAE881 | 0.27 | ABIE51_RS06350 | | dicarboxylate/amino acid:cation symporter | 0.13 | ABIE51_RS02840 | | TRAP transporter large permease | low | > 62 |
| Pectobacterium carotovorum WPP14 | 0.26 | HER17_RS14145 | | glutamate/aspartate:proton symporter GltP | 0.14 | HER17_RS19685 | | TRAP transporter large permease | low | > 75 |
| Pantoea sp. MT58 | 0.26 | IAI47_17710 | | glutamate/aspartate:proton symporter GltP | 0.14 | IAI47_03220 | | TRAP transporter large permease | low | > 76 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.25 | Xcc-8004.1894.1 | | Proton/glutamate symport protein @ Sodium/glutamate symport protein | 0.14 | Xcc-8004.203.1 | | TRAP-type C4-dicarboxylate transport system, large permease component | low | > 74 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.25 | OHPLBJKB_03963 | | Proton/glutamate-aspartate symporter | 0.14 | OHPLBJKB_03837 | | C4-dicarboxylate TRAP transporter large permease protein DctM | low | > 73 |
| Escherichia coli ECOR27 | 0.25 | NOLOHH_05035 | gltP | glutamate/aspartate:proton symporter GltP | 0.13 | NOLOHH_11090 | dctQ | Tripartite ATP-independent periplasmic transporter, DctM component | low | > 75 |
| Escherichia coli Nissle 1917 | 0.25 | ECOLIN_RS23590 | | glutamate/aspartate:proton symporter GltP | 0.13 | ECOLIN_RS17390 | | TRAP transporter large permease subunit | low | > 55 |
| Escherichia coli ECOR38 | 0.25 | HEPCGN_11410 | gltP | glutamate/aspartate:proton symporter GltP | 0.14 | HEPCGN_09415 | | C4-dicarboxylate ABC transporter | low | > 87 |
| Escherichia fergusonii Becca | 0.25 | EFB2_04512 | | Proton/glutamate-aspartate symporter | 0.12 | EFB2_00228 | | Sialic acid TRAP transporter large permease protein SiaM | low | > 86 |
| Escherichia coli ECRC62 | 0.25 | BNILDI_06490 | gltP | glutamate/aspartate:proton symporter GltP | 0.14 | BNILDI_07135 | | TRAP transporter large permease | low | > 75 |
| Escherichia coli BL21 | 0.25 | ECD_03949 | | glutamate/aspartate:proton symporter | 0.12 | ECD_03430 | | 2,3-diketo-L-gulonate TRAP transporter large permease protein | low | > 61 |
| Escherichia coli BW25113 | 0.25 | b4077 | gltP | glutamate/aspartate:proton symporter (NCBI) | 0.12 | b3578 | yiaN | predicted transporter (NCBI) | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.25 | GFF1460 | | Glutamate-aspartate carrier protein | 0.13 | GFF3132 | | TRAP-type C4-dicarboxylate transport system, large permease component | low | > 78 |
| Klebsiella michiganensis M5al | 0.24 | BWI76_RS02105 | | glutamate/aspartate:proton symporter GltP | 0.13 | BWI76_RS24135 | | c4-dicarboxylate permease | low | > 92 |
| Enterobacter sp. TBS_079 | 0.24 | MPMX20_00292 | | Proton/glutamate-aspartate symporter | 0.16 | MPMX20_04347 | | C4-dicarboxylate TRAP transporter large permease protein DctM | low | > 85 |
| Pseudomonas simiae WCS417 | 0.24 | PS417_00470 | | glutamate:protein symporter | 0.14 | PS417_14900 | | C4-dicarboxylate ABC transporter permease | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.24 | PFLU_RS00460 | | glutamate/aspartate:proton symporter GltP | 0.14 | PFLU_RS16920 | | TRAP transporter large permease | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.24 | PFLU_RS00460 | | glutamate/aspartate:proton symporter GltP | 0.14 | PFLU_RS16920 | | TRAP transporter large permease | low | > 109 |
| Pseudomonas putida KT2440 | 0.24 | PP_0137 | | glutamate/aspartate-proton DAACS transporter | 0.12 | PP_1167 | | D-glucuronate / D-galacturonate TRAP transporter, large permease component (from data) | low | > 96 |
| Pseudomonas syringae pv. syringae B728a | 0.24 | Psyr_0174 | | Sodium:dicarboxylate symporter | 0.12 | Psyr_0898 | | TRAP dicarboxylate transporter, DctM subunit | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.24 | Psyr_0174 | | Sodium:dicarboxylate symporter | 0.12 | Psyr_0898 | | TRAP dicarboxylate transporter, DctM subunit | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.23 | AO356_11400 | | glutamate:protein symporter | 0.14 | AO356_23045 | | hypothetical protein | low | > 104 |
| Rhodospirillum rubrum S1H | 0.23 | Rru_A1437 | | Sodium:dicarboxylate symporter (NCBI) | 0.16 | Rru_A3676 | | TRAP dicarboxylate transporter, DctM subunit (NCBI) | 0.73 | 5 |
| Pseudomonas fluorescens FW300-N2E2 | 0.23 | Pf6N2E2_4148 | | Glutamate-aspartate carrier protein | 0.15 | Pf6N2E2_485 | | TRAP-type C4-dicarboxylate transport system, large permease component | low | > 103 |
| Pseudomonas sp. RS175 | 0.23 | PFR28_04638 | | Proton/glutamate-aspartate symporter | 0.18 | PFR28_00121 | | C4-dicarboxylate TRAP transporter large permease protein DctM | low | > 88 |
| Azospirillum sp. SherDot2 | 0.22 | MPMX19_03595 | | C4-dicarboxylate transport protein 2 | 0.39 | MPMX19_01343 | | hypothetical protein | low | > 112 |
| Azospirillum brasilense Sp245 | 0.22 | AZOBR_RS21140 | | C4-dicarboxylate ABC transporter | 0.38 | AZOBR_RS20015 | | C4-dicarboxylate ABC transporter | low | > 97 |
| Agrobacterium fabrum C58 | 0.22 | Atu3298 | | C4-dicarboxylate transporter DctA | 0.39 | Atu3367 | | TRAP dicarboxylate transporter subunit DctM | low | > 89 |
| Cupriavidus basilensis FW507-4G11 | 0.21 | RR42_RS26130 | | C4-dicarboxylate ABC transporter | 0.32 | RR42_RS15935 | | C4-dicarboxylate ABC transporter | low | > 128 |
| Caulobacter crescentus NA1000 | 0.21 | CCNA_00264 | | C4-dicarboxylate transport protein | 0.14 | CCNA_01515 | | C4-dicarboxylate transporter large subunit | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.21 | CCNA_00264 | | C4-dicarboxylate transport protein | 0.14 | CCNA_01515 | | C4-dicarboxylate transporter large subunit | low | > 67 |
| Rhizobium sp. OAE497 | 0.21 | ABIE40_RS26345 | | dicarboxylate/amino acid:cation symporter | 0.39 | ABIE40_RS16625 | | TRAP transporter large permease subunit | low | > 107 |
| Herbaspirillum seropedicae SmR1 | 0.21 | HSERO_RS19090 | | C4-dicarboxylate ABC transporter | 0.18 | HSERO_RS13470 | | C4-dicarboxylate ABC transporter | low | > 78 |
| Rahnella sp. WP5 | 0.21 | EX31_RS05445 | | dicarboxylate/amino acid:cation symporter | 0.14 | EX31_RS08020 | | TRAP transporter large permease | low | > 89 |
| Variovorax sp. SCN45 | 0.21 | GFF5354 | | C4-dicarboxylate transport protein | 0.24 | GFF1830 | | TRAP dicarboxylate transporter, DctM subunit, unknown substrate 3 | low | > 127 |
| Dechlorosoma suillum PS | 0.21 | Dsui_3158 | | Na+/H+ dicarboxylate symporter | 0.45 | Dsui_1262 | | TRAP transporter, DctM subunit | low | > 51 |
| Acidovorax sp. GW101-3H11 | 0.20 | Ac3H11_719 | | Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate, aspartate | 0.20 | Ac3H11_2592 | | TRAP dicarboxylate transporter, DctM subunit, unknown substrate 5 | low | > 79 |
| Variovorax sp. OAS795 | 0.20 | ABID97_RS23115 | | dicarboxylate/amino acid:cation symporter | 0.31 | ABID97_RS09295 | | TRAP transporter large permease subunit | low | > 91 |
| Sinorhizobium meliloti 1021 | 0.20 | SM_b20611 | | C4-dicarboxylate transporter DctA | 0.34 | SMc04249 | | hypothetical protein | low | > 103 |
| Ralstonia sp. UNC404CL21Col | 0.19 | ABZR87_RS06625 | | dicarboxylate/amino acid:cation symporter | 0.11 | ABZR87_RS21100 | | TRAP transporter large permease | low | > 80 |
| Paraburkholderia sabiae LMG 24235 | 0.19 | QEN71_RS26995 | | C4-dicarboxylate transporter DctA | 0.16 | QEN71_RS36140 | | TRAP transporter large permease | low | > 153 |
Not shown: 36 genomes with orthologs for B158DRAFT_2215 only; 5 genomes with orthologs for B158DRAFT_0227 only