Conservation of cofitness between Atu3181 and Atu2569 in Agrobacterium fabrum C58

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu3181 hypothetical protein 1.0 Atu2569 thiamine biosynthesis protein 0.24 6
Rhodopseudomonas palustris CGA009 0.71 TX73_007510 GTP-binding protein 0.70 TX73_018540 phosphomethylpyrimidine synthase ThiC low > 86
Xanthobacter sp. DMC5 0.68 GFF1508 Putative metal chaperone YciC 0.70 GFF257 Phosphomethylpyrimidine synthase
Bosea sp. OAE506 0.68 ABIE41_RS15395 GTP-binding protein 0.71 ABIE41_RS02770 phosphomethylpyrimidine synthase ThiC low > 77
Dinoroseobacter shibae DFL-12 0.60 Dshi_2487 cobalamin synthesis protein P47K (RefSeq) 0.85 Dshi_4080 thiamine biosynthesis protein ThiC (RefSeq)
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS12720 hypothetical protein 0.67 HSERO_RS02120 phosphomethylpyrimidine synthase ThiC low > 78
Variovorax sp. SCN45 0.59 GFF7058 Zinc-binding GTPase YciC 0.66 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) low > 127
Phaeobacter inhibens DSM 17395 0.59 PGA1_c20610 putative metal chaperone 0.81 PGA1_c09110 thiamine biosynthesis protein ThiC low > 62
Methylophilus sp. DMC18 0.57 GFF601 Putative metal chaperone YciC 0.69 GFF2191 Phosphomethylpyrimidine synthase low > 43
Pectobacterium carotovorum WPP14 0.56 HER17_RS10375 zinc metallochaperone GTPase ZigA 0.67 HER17_RS20380 phosphomethylpyrimidine synthase ThiC low > 75
Acinetobacter baumannii LAC-4 0.56 RR41_RS00360 zinc metallochaperone GTPase ZigA 0.66 RR41_RS17715 phosphomethylpyrimidine synthase ThiC low > 55
Pantoea agglomerans CFBP13505 P0401 0.55 PagCFBP13505_RS07270 GTP-binding protein 0.66 PagCFBP13505_RS22620 phosphomethylpyrimidine synthase ThiC low > 74
Pantoea sp. MT58 0.54 IAI47_21320 GTP-binding protein 0.67 IAI47_18085 phosphomethylpyrimidine synthase ThiC low > 76
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_11940 4-hydroxytetrahydrobiopterin dehydratase 0.67 AO356_08810 thiamine biosynthesis protein ThiC low > 104
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_4263 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family 0.67 Pf6N2E2_3644 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 103
Pseudomonas sp. RS175 0.54 PFR28_04533 Putative metal chaperone YciC 0.67 PFR28_05091 Phosphomethylpyrimidine synthase low > 88
Pseudomonas sp. DMC3 0.54 GFF522 Putative metal chaperone YciC 0.67 GFF3183 Phosphomethylpyrimidine synthase low > 89
Pseudomonas fluorescens SBW25 0.53 PFLU_RS29950 GTP-binding protein 0.67 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC low > 109
Pseudomonas simiae WCS417 0.53 PS417_28285 hypothetical protein 0.67 PS417_02355 thiamine biosynthesis protein ThiC low > 88
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS29950 GTP-binding protein 0.67 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC low > 109
Alteromonas macleodii MIT1002 0.53 MIT1002_02552 Putative metal chaperone YciC 0.66 MIT1002_00097 Phosphomethylpyrimidine synthase low > 70
Pseudomonas lactucae CFBP13502 0.53 GEMAOFIL_00125 Putative metal chaperone YciC 0.67 GEMAOFIL_00708 Phosphomethylpyrimidine synthase low > 96
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_1994 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family 0.67 Pf1N1B4_1447 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 87
Pseudomonas sp. S08-1 0.53 OH686_23515 Zinc-binding GTPase YciC 0.68 OH686_15885 phosphomethylpyrimidine synthase low > 80
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_713 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family 0.66 PfGW456L13_187 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 87
Pseudomonas segetis P6 0.53 MPMX49_00203 Putative metal chaperone YciC 0.67 MPMX49_04184 Phosphomethylpyrimidine synthase low > 75
Pseudomonas sp. SVBP6 0.53 COO64_RS01890 zigA zinc metallochaperone GTPase ZigA 0.67 COO64_RS17755 thiC phosphomethylpyrimidine synthase ThiC low > 93
Pseudomonas stutzeri RCH2 0.53 Psest_0747 Putative GTPases (G3E family) 0.67 Psest_0477 thiamine biosynthesis protein ThiC low > 67
Pseudomonas fluorescens FW300-N2E3 0.52 AO353_10110 4-hydroxytetrahydrobiopterin dehydratase 0.66 AO353_13010 thiamine biosynthesis protein ThiC low > 101
Pseudomonas syringae pv. syringae B728a 0.52 Psyr_5075 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K 0.67 Psyr_0544 hydroxymethylpyrimidine synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.52 Psyr_5075 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K 0.67 Psyr_0544 hydroxymethylpyrimidine synthase low > 86
Pseudomonas aeruginosa PUPa3 0.52 DQ20_RS58405 zigA;inference=COORDINATES zinc metallochaperone GTPase ZigA 0.67 DQ20_RS51400 thiC;go_function=iron-sulfur phosphomethylpyrimidine synthase ThiC low > 101
Pseudomonas aeruginosa MRSN321 0.52 DY961_RS25980 zigA;inference=COORDINATES zinc metallochaperone GTPase ZigA 0.67 DY961_RS10660 thiC;go_function=iron-sulfur phosphomethylpyrimidine synthase ThiC low > 100
Pseudomonas putida KT2440 0.52 PP_5361 47 kDa protein 0.68 PP_4922 Phosphomethylpyrimidine synthase low > 96
Pseudomonas aeruginosa PA14 0.52 IKLFDK_25735 zinc metallochaperone GTPase ZigA 0.67 IKLFDK_28675 phosphomethylpyrimidine synthase ThiC low > 98
Pseudomonas sp. BP01 0.52 JOY50_RS08690 zigA zinc metallochaperone GTPase ZigA 0.67 JOY50_RS10065 thiC phosphomethylpyrimidine synthase ThiC low > 84
Rahnella sp. WP5 0.52 EX31_RS15695 GTP-binding protein 0.67 EX31_RS16815 phosphomethylpyrimidine synthase ThiC low > 89
Serratia liquefaciens MT49 0.51 IAI46_13510 GTP-binding protein 0.66 IAI46_01320 phosphomethylpyrimidine synthase ThiC low > 87
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS05105 zinc metallochaperone GTPase ZigA 0.64 ABZR87_RS04785 phosphomethylpyrimidine synthase ThiC 0.59 15
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS01025 GTPase 0.63 RR42_RS01290 thiamine biosynthesis protein ThiC low > 128
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS09640 GTP-binding protein 0.63 RALBFv3_RS09940 phosphomethylpyrimidine synthase ThiC low > 76
Ralstonia solanacearum UW163 0.50 UW163_RS03940 GTP-binding protein 0.63 UW163_RS03640 phosphomethylpyrimidine synthase ThiC
Ralstonia solanacearum GMI1000 0.50 RS_RS00225 GTP-binding protein 0.63 RS_RS00555 phosphomethylpyrimidine synthase low > 80
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.333.1 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family 0.64 Xcc-8004.1066.1 hypothetical protein low > 74
Ralstonia solanacearum PSI07 0.50 RPSI07_RS23725 GTP-binding protein 0.64 RPSI07_RS23420 phosphomethylpyrimidine synthase ThiC low > 81
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS19585 cobalamin biosynthesis protein CobW 0.66 BPHYT_RS13220 phosphomethylpyrimidine synthase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_02358 GTPase, G3E family 0.65 H281DRAFT_00395 hydroxymethylpyrimidine synthase low > 103
Dickeya dadantii 3937 0.49 DDA3937_RS12435 GTP-binding protein 0.66 DDA3937_RS01175 phosphomethylpyrimidine synthase ThiC low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.49 Echvi_2702 Putative GTPases (G3E family) 0.68 Echvi_3567 thiamine biosynthesis protein ThiC low > 79
Paraburkholderia graminis OAS925 0.45 ABIE53_000293 G3E family GTPase 0.66 ABIE53_002857 phosphomethylpyrimidine synthase low > 113
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS29500 GTP-binding protein 0.66 QEN71_RS05480 phosphomethylpyrimidine synthase ThiC low > 153
Phocaeicola vulgatus CL09T03C04 0.30 HMPREF1058_RS13270 GTP-binding protein 0.58 HMPREF1058_RS03280 phosphomethylpyrimidine synthase ThiC low > 67
Phocaeicola dorei CL03T12C01 0.30 ABI39_RS08435 GTP-binding protein 0.58 ABI39_RS17760 phosphomethylpyrimidine synthase ThiC low > 72
Bacteroides stercoris CC31F 0.24 HMPREF1181_RS07845 GTP-binding protein 0.57 HMPREF1181_RS14685 phosphomethylpyrimidine synthase ThiC low > 56
Escherichia coli Nissle 1917 0.15 ECOLIN_RS05820 GTP-binding protein 0.67 ECOLIN_RS23040 phosphomethylpyrimidine synthase ThiC
Escherichia fergusonii Becca 0.15 EFB2_02962 Putative metal chaperone YciC 0.67 EFB2_04617 Phosphomethylpyrimidine synthase low > 86
Mycobacterium tuberculosis H37Rv 0.11 Rv0106 Conserved hypothetical protein 0.54 Rv0423c Probable thiamine biosynthesis protein ThiC

Not shown: 2 genomes with orthologs for Atu3181 only; 54 genomes with orthologs for Atu2569 only