| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Ralstonia sp. UNC404CL21Col | 1.0 | ABZR87_RS13545 | | amino acid permease | 1.0 | ABZR87_RS05320 | | efflux transporter outer membrane subunit | 0.52 | 2 |
| Ralstonia solanacearum PSI07 | 0.91 | RPSI07_RS15760 | | amino acid permease | 0.88 | RPSI07_RS23910 | | multidrug transporter | low | > 81 |
| Ralstonia solanacearum IBSBF1503 | 0.90 | RALBFv3_RS01725 | | amino acid permease | 0.88 | RALBFv3_RS09440 | | multidrug transporter | low | > 76 |
| Ralstonia solanacearum UW163 | 0.90 | UW163_RS15035 | | amino acid permease | 0.88 | UW163_RS04140 | | multidrug transporter | — | — |
| Ralstonia solanacearum GMI1000 | 0.88 | RS_RS08000 | | amino acid permease | 0.87 | RS_RS00040 | | multidrug transporter | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.79 | RR42_RS01585 | | amino acid permease | 0.53 | RR42_RS20655 | | multidrug transporter | low | > 128 |
| Paraburkholderia sabiae LMG 24235 | 0.71 | QEN71_RS00500 | | amino acid permease | 0.42 | QEN71_RS29860 | | efflux transporter outer membrane subunit | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.71 | H281DRAFT_02180 | | amino acid/polyamine/organocation transporter, APC superfamily | 0.40 | H281DRAFT_04169 | | outer membrane protein, multidrug efflux system | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.69 | BPHYT_RS01785 | | amino acid permease | 0.41 | BPHYT_RS16165 | | multidrug transporter | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.45 | ABZR86_RS06670 | | amino acid permease | 0.38 | ABZR86_RS18290 | | AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor | low | > 74 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.44 | Xcc-8004.2936.1 | | Amino acid transporters | 0.40 | Xcc-8004.1795.1 | | RND efflux system, outer membrane lipoprotein CmeC | low | > 74 |
| Phocaeicola vulgatus CL09T03C04 | 0.43 | HMPREF1058_RS13815 | | amino acid permease | 0.21 | HMPREF1058_RS05155 | | efflux transporter outer membrane subunit | low | > 67 |
| Rhodopseudomonas palustris CGA009 | 0.42 | TX73_003040 | | amino acid permease | 0.17 | TX73_013300 | | efflux transporter outer membrane subunit | low | > 86 |
| Caulobacter crescentus NA1000 | 0.42 | CCNA_01242 | | amino acid permease | 0.39 | CCNA_00849 | | outer membrane efflux protein | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.42 | CCNA_01242 | | amino acid permease | 0.39 | CCNA_00849 | | outer membrane efflux protein | low | > 67 |
| Sphingomonas koreensis DSMZ 15582 | 0.41 | Ga0059261_1053 | | amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3) | 0.26 | Ga0059261_0558 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | low | > 68 |
| Pseudomonas putida KT2440 | 0.13 | PP_0544 | | Ethanolamine transporter | 0.40 | PP_1384 | | Probable efflux pump outer membrane protein TtgC | low | > 96 |
| Serratia liquefaciens MT49 | 0.13 | IAI46_17155 | | APC family permease | 0.36 | IAI46_16730 | | efflux transporter outer membrane subunit | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.12 | Pf1N1B4_5855 | | Putrescine importer | 0.42 | Pf1N1B4_3245 | | RND efflux system, outer membrane lipoprotein, NodT family | — | — |
| Pseudomonas sp. RS175 | 0.12 | PFR28_01269 | | Putrescine importer PuuP | 0.41 | PFR28_00630 | | putative efflux pump outer membrane protein TtgC | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.12 | Pf6N2E2_2179 | | Putrescine importer | 0.42 | Pf6N2E2_1948 | | RND efflux system, outer membrane lipoprotein CmeC | low | > 103 |
| Pseudomonas stutzeri RCH2 | 0.12 | Psest_0670 | | ethanolamine permease | 0.40 | Psest_0311 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | low | > 67 |
| Pseudomonas fluorescens FW300-N2C3 | 0.12 | AO356_01520 | | porin | 0.43 | AO356_30435 | | multidrug transporter | low | > 104 |
| Dickeya dianthicola 67-19 | 0.12 | HGI48_RS09825 | | APC family permease | 0.31 | HGI48_RS03490 | | Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC | low | > 71 |
| Rahnella sp. WP5 | 0.12 | EX31_RS20130 | | ethanolamine permease | 0.37 | EX31_RS13330 | | efflux transporter outer membrane subunit | low | > 89 |
| Dickeya dadantii 3937 | 0.12 | DDA3937_RS09815 | | APC family permease | 0.30 | DDA3937_RS14115 | | efflux transporter outer membrane subunit | low | > 74 |
| Pseudomonas fluorescens FW300-N2E3 | 0.12 | AO353_27910 | | porin | 0.40 | AO353_17290 | | multidrug transporter | low | > 101 |
| Shewanella sp. ANA-3 | 0.12 | Shewana3_3634 | | amino acid permease-associated region (RefSeq) | 0.31 | Shewana3_4297 | | copper/silver efflux system outer membrane protein CusC (RefSeq) | low | > 73 |
| Dickeya dianthicola ME23 | 0.12 | DZA65_RS10150 | | APC family permease | 0.31 | DZA65_RS03600 | | efflux transporter outer membrane subunit | low | > 75 |
| Klebsiella michiganensis M5al | 0.12 | BWI76_RS03640 | | amino acid permease-associated protein | 0.28 | BWI76_RS27700 | | multidrug transporter | low | > 92 |
| Acinetobacter radioresistens SK82 | 0.11 | MPMX26_01769 | | putative amino acid permease YhdG | 0.33 | MPMX26_00688 | | Outer membrane protein OprM | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.11 | Psyr_2379 | | amino acid/polyamine/organocation transporter, APC superfamily | 0.42 | Psyr_4009 | | RND efflux system, outer membrane lipoprotein, NodT | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.11 | OHPLBJKB_02386 | | Putrescine importer PuuP | 0.34 | OHPLBJKB_03137 | | Cation efflux system protein CusC | low | > 73 |
| Pseudomonas syringae pv. syringae B728a | 0.11 | Psyr_2379 | | amino acid/polyamine/organocation transporter, APC superfamily | 0.42 | Psyr_4009 | | RND efflux system, outer membrane lipoprotein, NodT | low | > 86 |
| Escherichia coli ECRC62 | 0.11 | BNILDI_18285 | puuP | putrescine/proton symporter PuuP | 0.34 | BNILDI_22090 | cusC | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | low | > 75 |
| Escherichia coli BL21 | 0.11 | ECD_01273 | | putrescine importer | 0.34 | ECD_00533 | | copper/silver efflux system, outer membrane component | low | > 61 |
| Herbaspirillum seropedicae SmR1 | 0.11 | HSERO_RS12590 | | ethanolamin permease | 0.52 | HSERO_RS02405 | | multidrug transporter | low | > 78 |
| Escherichia coli ECOR27 | 0.11 | NOLOHH_20135 | puuP | putrescine/proton symporter PuuP | 0.34 | NOLOHH_24080 | cusC | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | low | > 75 |
| Escherichia coli BW25113 | 0.11 | b1296 | ycjJ | putative amino acid/amine transport protein (VIMSS) | 0.34 | b0572 | cusC | copper/silver efflux system, outer membrane component (NCBI) | low | > 76 |
| Escherichia coli ECRC100 | 0.11 | OKFHMN_02450 | puuP | putrescine/proton symporter PuuP | 0.34 | OKFHMN_07700 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | low | > 80 |
| Escherichia coli ECRC99 | 0.11 | KEDOAH_26325 | puuP | putrescine/proton symporter PuuP | 0.34 | KEDOAH_20270 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | — | — |
| Escherichia coli ECRC98 | 0.11 | JDDGAC_04995 | puuP | putrescine/proton symporter PuuP | 0.34 | JDDGAC_11345 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | low | > 86 |
| Escherichia coli ECRC101 | 0.11 | MCAODC_15820 | puuP | putrescine/proton symporter PuuP | 0.34 | MCAODC_26915 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | low | > 87 |
| Escherichia coli ECRC102 | 0.11 | NIAGMN_26620 | puuP | putrescine/proton symporter PuuP | 0.34 | NIAGMN_05755 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | — | — |
| Enterobacter asburiae PDN3 | 0.11 | EX28DRAFT_1496 | | Amino acid transporters | 0.31 | EX28DRAFT_1166 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | low | > 76 |
| Escherichia coli Nissle 1917 | 0.11 | ECOLIN_RS11915 | | putrescine/proton symporter PlaP | 0.34 | ECOLIN_RS03130 | | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | — | — |
| Pantoea sp. MT58 | 0.11 | IAI47_07130 | | APC family permease | 0.20 | IAI47_12395 | | efflux transporter outer membrane subunit | low | > 76 |
| Enterobacter sp. TBS_079 | 0.11 | MPMX20_02998 | | Low-affinity putrescine importer PlaP | 0.30 | MPMX20_02318 | | Cation efflux system protein CusC | low | > 85 |
| Escherichia fergusonii Becca | 0.10 | EFB2_01842 | | Low-affinity putrescine importer PlaP | 0.34 | EFB2_03522 | | Cation efflux system protein CusC | low | > 86 |
| Escherichia coli ECOR38 | 0.10 | HEPCGN_03255 | plaP | putrescine/proton symporter PlaP | 0.34 | HEPCGN_00590 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | low | > 87 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.10 | GFF3916 | | Putrescine importer | 0.34 | GFF4245 | | RND efflux system, outer membrane lipoprotein CmeC | low | > 78 |
| Variovorax sp. OAS795 | 0.10 | ABID97_RS19505 | | ethanolamine permease | 0.38 | ABID97_RS00330 | | efflux transporter outer membrane subunit | low | > 91 |
| Rhodospirillum rubrum S1H | 0.10 | Rru_A1030 | | Amino acid permease-associated region (NCBI) | 0.38 | Rru_A2052 | | RND efflux system, outer membrane lipoprotein, NodT (NCBI) | low | > 58 |
| Pseudomonas sp. S08-1 | 0.09 | OH686_03555 | | Lysine/cadaverine antiporter membrane protein CadB | 0.38 | OH686_16055 | | Multidrug efflux system, outer membrane factor lipoprotein | low | > 80 |
Not shown: 21 genomes with orthologs for ABZR87_RS13545 only; 17 genomes with orthologs for ABZR87_RS05320 only