Conservation of cofitness between ABZR87_RS13545 and ABZR87_RS04885 in Ralstonia sp. UNC404CL21Col

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS13545 amino acid permease 1.0 ABZR87_RS04885 lytic transglycosylase domain-containing protein 0.50 3
Ralstonia solanacearum PSI07 0.91 RPSI07_RS15760 amino acid permease 0.91 RPSI07_RS23510 lytic transglycosylase low > 81
Ralstonia solanacearum UW163 0.90 UW163_RS15035 amino acid permease 0.91 UW163_RS03720 lytic transglycosylase — —
Ralstonia solanacearum IBSBF1503 0.90 RALBFv3_RS01725 amino acid permease 0.91 RALBFv3_RS09860 lytic transglycosylase low > 76
Ralstonia solanacearum GMI1000 0.88 RS_RS08000 amino acid permease 0.91 RS_RS00445 lytic transglycosylase low > 80
Cupriavidus basilensis FW507-4G11 0.79 RR42_RS01585 amino acid permease 0.69 RR42_RS01405 lytic transglycosylase low > 128
Paraburkholderia graminis OAS925 0.73 ABIE53_000447 APA family basic amino acid/polyamine antiporter 0.51 ABIE53_000044 soluble lytic murein transglycosylase low > 113
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS00500 amino acid permease 0.52 QEN71_RS28635 lytic transglycosylase domain-containing protein 0.44 42
Paraburkholderia bryophila 376MFSha3.1 0.71 H281DRAFT_02180 amino acid/polyamine/organocation transporter, APC superfamily 0.50 H281DRAFT_05816 soluble lytic murein transglycosylase low > 103
Burkholderia phytofirmans PsJN 0.69 BPHYT_RS01785 amino acid permease 0.52 BPHYT_RS18610 lytic transglycosylase low > 109
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_05010 potE amino acid permease 0.15 OKGIIK_16395 Lytic transglycosylase low > 52
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS06670 amino acid permease 0.15 ABZR86_RS12745 transglycosylase SLT domain-containing protein low > 74
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS01525 amino acid permease 0.15 LRK54_RS07245 transglycosylase SLT domain-containing protein low > 59
Rhodanobacter denitrificans MT42 0.45 LRK55_RS01315 amino acid permease 0.15 LRK55_RS06980 transglycosylase SLT domain-containing protein low > 63
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.2936.1 Amino acid transporters 0.15 Xcc-8004.961.1 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 74
Lysobacter sp. OAE881 0.43 ABIE51_RS13265 amino acid permease 0.14 ABIE51_RS19070 transglycosylase SLT domain-containing protein low > 62
Serratia liquefaciens MT49 0.13 IAI46_17155 APC family permease 0.12 IAI46_02985 murein transglycosylase low > 86
Pseudomonas putida KT2440 0.13 PP_0544 Ethanolamine transporter 0.16 PP_2130 putative Soluble lytic transglycosylase low > 96
Pseudomonas stutzeri RCH2 0.12 Psest_0670 ethanolamine permease 0.15 Psest_1844 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) low > 67
Pectobacterium carotovorum WPP14 0.12 HER17_RS12140 APC family permease 0.12 HER17_RS02750 murein transglycosylase low > 75
Pseudomonas fluorescens FW300-N1B4 0.12 Pf1N1B4_5855 Putrescine importer 0.16 Pf1N1B4_3898 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 87
Pseudomonas sp. RS175 0.12 PFR28_01269 Putrescine importer PuuP 0.17 PFR28_01106 Soluble lytic murein transglycosylase low > 88
Pseudomonas fluorescens FW300-N2E2 0.12 Pf6N2E2_2179 Putrescine importer 0.16 Pf6N2E2_2294 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 103
Rahnella sp. WP5 0.12 EX31_RS20130 ethanolamine permease 0.12 EX31_RS03985 murein transglycosylase low > 89
Dickeya dianthicola 67-19 0.12 HGI48_RS09825 APC family permease 0.12 HGI48_RS18385 murein transglycosylase low > 71
Pseudomonas fluorescens FW300-N2C3 0.12 AO356_01520 porin 0.17 AO356_02350 lytic transglycosylase low > 104
Pseudomonas fluorescens FW300-N2E3 0.12 AO353_27910 porin 0.17 AO353_00530 lytic transglycosylase low > 101
Dickeya dadantii 3937 0.12 DDA3937_RS09815 APC family permease 0.12 DDA3937_RS18455 murein transglycosylase low > 74
Shewanella sp. ANA-3 0.12 Shewana3_3634 amino acid permease-associated region (RefSeq) 0.12 Shewana3_2236 lytic transglycosylase, catalytic (RefSeq) low > 73
Dickeya dianthicola ME23 0.12 DZA65_RS10150 APC family permease 0.11 DZA65_RS19525 murein transglycosylase low > 75
Klebsiella michiganensis M5al 0.12 BWI76_RS03640 amino acid permease-associated protein 0.12 BWI76_RS04185 murein transglycosylase low > 92
Shewanella oneidensis MR-1 0.12 SO4081 amino acid permease (NCBI ptt file) 0.12 SO2040 soluble lytic murein transglycosylase, putative (NCBI ptt file) low > 76
Acinetobacter radioresistens SK82 0.11 MPMX26_01769 putative amino acid permease YhdG 0.18 MPMX26_02666 Soluble lytic murein transglycosylase — —
Escherichia coli BW25113 0.11 b1296 ycjJ putative amino acid/amine transport protein (VIMSS) 0.12 b4392 slt soluble lytic murein transglycosylase (VIMSS) low > 76
Escherichia coli ECRC62 0.11 BNILDI_18285 puuP putrescine/proton symporter PuuP 0.12 BNILDI_08095 sltY murein transglycosylase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.11 OHPLBJKB_02386 Putrescine importer PuuP 0.12 OHPLBJKB_03669 Soluble lytic murein transglycosylase low > 73
Pseudomonas syringae pv. syringae B728a 0.11 Psyr_2379 amino acid/polyamine/organocation transporter, APC superfamily 0.16 Psyr_3295 SLT low > 86
Escherichia coli ECOR27 0.11 NOLOHH_20135 puuP putrescine/proton symporter PuuP 0.12 NOLOHH_03500 sltY murein transglycosylase low > 75
Pseudomonas syringae pv. syringae B728a ΔmexB 0.11 Psyr_2379 amino acid/polyamine/organocation transporter, APC superfamily 0.16 Psyr_3295 SLT low > 86
Escherichia coli BL21 0.11 ECD_01273 putrescine importer 0.11 ECD_04268 lytic murein transglycosylase, soluble low > 61
Herbaspirillum seropedicae SmR1 0.11 HSERO_RS12590 ethanolamin permease 0.47 HSERO_RS21415 lytic transglycosylase low > 78
Escherichia coli ECRC102 0.11 NIAGMN_26620 puuP putrescine/proton symporter PuuP 0.12 NIAGMN_09020 sltY murein transglycosylase — —
Escherichia coli ECRC100 0.11 OKFHMN_02450 puuP putrescine/proton symporter PuuP 0.12 OKFHMN_11170 sltY murein transglycosylase low > 80
Enterobacter asburiae PDN3 0.11 EX28DRAFT_1496 Amino acid transporters 0.13 EX28DRAFT_3602 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) low > 76
Escherichia coli ECRC101 0.11 MCAODC_15820 puuP putrescine/proton symporter PuuP 0.12 MCAODC_01685 sltY murein transglycosylase low > 87
Escherichia coli ECRC98 0.11 JDDGAC_04995 puuP putrescine/proton symporter PuuP 0.12 JDDGAC_14765 sltY murein transglycosylase low > 86
Escherichia coli ECRC99 0.11 KEDOAH_26325 puuP putrescine/proton symporter PuuP 0.12 KEDOAH_16985 sltY murein transglycosylase — —
Escherichia coli Nissle 1917 0.11 ECOLIN_RS11915 putrescine/proton symporter PlaP 0.12 ECOLIN_RS25210 murein transglycosylase low > 55
Pantoea sp. MT58 0.11 IAI47_07130 APC family permease 0.13 IAI47_16260 murein transglycosylase low > 76
Enterobacter sp. TBS_079 0.11 MPMX20_02998 Low-affinity putrescine importer PlaP 0.12 MPMX20_00699 Soluble lytic murein transglycosylase low > 85
Escherichia coli ECOR38 0.10 HEPCGN_03255 plaP putrescine/proton symporter PlaP 0.12 HEPCGN_09175 sltY murein transglycosylase low > 87
Escherichia fergusonii Becca 0.10 EFB2_01842 Low-affinity putrescine importer PlaP 0.12 EFB2_04052 Soluble lytic murein transglycosylase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.10 GFF3916 Putrescine importer 0.12 GFF1060 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 78
Variovorax sp. OAS795 0.10 ABID97_RS19505 ethanolamine permease 0.31 ABID97_RS06595 transglycosylase SLT domain-containing protein low > 91
Pseudomonas sp. S08-1 0.09 OH686_03555 Lysine/cadaverine antiporter membrane protein CadB 0.16 OH686_21900 Soluble lytic murein transglycosylase low > 80

Not shown: 20 genomes with orthologs for ABZR87_RS13545 only; 15 genomes with orthologs for ABZR87_RS04885 only