Conservation of cofitness between ABZR86_RS07350 and ABZR86_RS02245 in Dyella japonica UNC79MFTsu3.2

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dyella japonica UNC79MFTsu3.2 1.0 ABZR86_RS07350 ribonuclease D 1.0 ABZR86_RS02245 excinuclease ABC subunit UvrC 0.49 8
Rhodanobacter denitrificans FW104-10B01 0.67 LRK54_RS16010 ribonuclease D 0.89 LRK54_RS00380 excinuclease ABC subunit UvrC low > 59
Rhodanobacter denitrificans MT42 0.67 LRK55_RS15770 ribonuclease D 0.88 LRK55_RS00120 excinuclease ABC subunit UvrC low > 63
Rhodanobacter sp. FW510-T8 0.65 OKGIIK_08985 Ribonuclease D 0.87 OKGIIK_06930 uvrC excinuclease ABC subunit UvrC low > 52
Xanthomonas campestris pv. campestris strain 8004 0.26 Xcc-8004.2248.1 Ribonuclease D (EC 3.1.26.3) 0.57 Xcc-8004.2477.1 Excinuclease ABC subunit C low > 74
Shewanella amazonensis SB2B 0.24 Sama_1933 ribonuclease D (RefSeq) 0.48 Sama_1608 uvrC excinuclease ABC subunit C (RefSeq) low > 62
Pseudomonas fluorescens FW300-N2C3 0.23 AO356_04420 ribonuclease D 0.55 AO356_00350 excinuclease ABC subunit C low > 104
Shewanella loihica PV-4 0.23 Shew_2187 ribonuclease D (RefSeq) 0.48 Shew_1825 uvrC excinuclease ABC subunit C (RefSeq) low > 60
Pseudomonas fluorescens FW300-N2E2 0.23 Pf6N2E2_2727 Ribonuclease D (EC 3.1.26.3) 0.53 Pf6N2E2_2021 Excinuclease ABC subunit C low > 103
Marinobacter adhaerens HP15 0.23 HP15_1882 ribonuclease D 0.51 HP15_1568 excinuclease ABC subunit C low > 73
Pseudomonas fluorescens FW300-N2E3 0.22 AO353_17855 ribonuclease D 0.55 AO353_21835 excinuclease ABC subunit C low > 101
Shewanella sp. ANA-3 0.22 Shewana3_2385 ribonuclease D (RefSeq) 0.48 Shewana3_1609 uvrC excinuclease ABC subunit C (RefSeq) low > 73
Pseudomonas sp. RS175 0.22 PFR28_00712 Ribonuclease D 0.53 PFR28_01411 UvrABC system protein C low > 88
Pseudomonas fluorescens FW300-N1B4 0.22 Pf1N1B4_3345 Ribonuclease D (EC 3.1.26.3) 0.55 Pf1N1B4_5618 Excinuclease ABC subunit C low > 87
Shewanella oneidensis MR-1 0.22 SO2580 rnd ribonuclease D (NCBI ptt file) 0.48 SO1861 uvrC excinuclease ABC, C subunit (NCBI ptt file) low > 76
Kangiella aquimarina DSM 16071 0.22 B158DRAFT_1574 ribonuclease D 0.46 B158DRAFT_1273 Excinuclease ABC subunit C low > 40
Pseudomonas fluorescens GW456-L13 0.22 PfGW456L13_4496 Ribonuclease D (EC 3.1.26.3) 0.55 PfGW456L13_2886 Excinuclease ABC subunit C low > 87
Rahnella sp. WP5 0.22 EX31_RS10595 ribonuclease D 0.49 EX31_RS24150 excinuclease ABC subunit UvrC low > 89
Pseudomonas fluorescens SBW25-INTG 0.22 PFLU_RS07465 ribonuclease D 0.55 PFLU_RS10770 excinuclease ABC subunit UvrC low > 109
Pseudomonas fluorescens SBW25 0.22 PFLU_RS07465 ribonuclease D 0.55 PFLU_RS10770 excinuclease ABC subunit UvrC low > 109
Pseudomonas putida KT2440 0.22 PP_4591 Ribonuclease D 0.55 PP_4098 UvrABC system protein C low > 96
Serratia liquefaciens MT49 0.22 IAI46_14530 ribonuclease D 0.50 IAI46_09210 excinuclease ABC subunit UvrC low > 86
Pantoea sp. MT58 0.22 IAI47_08840 ribonuclease D 0.49 IAI47_12465 excinuclease ABC subunit UvrC low > 76
Pseudomonas sp. S08-1 0.21 OH686_05315 ribonuclease D 0.54 OH686_00340 excinuclease ABC subunit C low > 80
Pseudomonas stutzeri RCH2 0.21 Psest_2995 ribonuclease D 0.55 Psest_2259 excinuclease ABC, C subunit — —
Pseudomonas simiae WCS417 0.21 PS417_07375 ribonuclease D 0.55 PS417_10725 excinuclease ABC subunit C low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_1563 Ribonuclease D 0.54 Psyr_2896 Excinuclease ABC subunit C low > 86
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_1563 Ribonuclease D 0.54 Psyr_2896 Excinuclease ABC subunit C low > 86
Klebsiella michiganensis M5al 0.21 BWI76_RS17795 ribonuclease D 0.49 BWI76_RS18330 excinuclease ABC subunit C low > 92
Escherichia coli BL21 0.21 ECD_01774 ribonuclease D 0.49 ECD_01878 excinuclease UvrABC, endonuclease subunit low > 61
Escherichia coli ECOR38 0.21 HEPCGN_04995 rnd ribonuclease D 0.50 HEPCGN_04180 uvrC excinuclease ABC subunit UvrC low > 87
Enterobacter asburiae PDN3 0.21 EX28DRAFT_0755 ribonuclease D 0.49 EX28DRAFT_0634 Excinuclease ABC subunit C low > 76
Escherichia coli BW25113 0.21 b1804 rnd ribonuclease D (NCBI) 0.50 b1913 uvrC excinuclease ABC, subunit C; repair of UV damage to DNA (VIMSS) low > 76
Escherichia coli ECRC99 0.21 KEDOAH_01505 rnd ribonuclease D 0.50 KEDOAH_02265 uvrC excinuclease ABC subunit UvrC — —
Escherichia coli ECRC100 0.21 OKFHMN_26605 rnd ribonuclease D 0.50 OKFHMN_25825 uvrC excinuclease ABC subunit UvrC low > 80
Escherichia coli ECRC62 0.21 BNILDI_15910 rnd ribonuclease D 0.50 BNILDI_15235 uvrC excinuclease ABC subunit UvrC low > 75
Escherichia coli ECOR27 0.21 NOLOHH_17125 rnd ribonuclease D 0.49 NOLOHH_16445 uvrC excinuclease ABC subunit UvrC low > 75
Escherichia coli ECRC98 0.21 JDDGAC_01180 rnd ribonuclease D 0.50 JDDGAC_00415 uvrC excinuclease ABC subunit UvrC low > 86
Escherichia coli ECRC101 0.21 MCAODC_18805 rnd ribonuclease D 0.50 MCAODC_19565 uvrC excinuclease ABC subunit UvrC low > 87
Escherichia coli ECRC102 0.21 NIAGMN_01460 rnd ribonuclease D 0.50 NIAGMN_02225 uvrC excinuclease ABC subunit UvrC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_01929 Ribonuclease D 0.50 OHPLBJKB_01816 UvrABC system protein C low > 73
Escherichia coli Nissle 1917 0.20 ECOLIN_RS10035 ribonuclease D 0.50 ECOLIN_RS10895 excinuclease ABC subunit UvrC — —
Pectobacterium carotovorum WPP14 0.20 HER17_RS11270 ribonuclease D 0.48 HER17_RS07715 excinuclease ABC subunit UvrC low > 75
Escherichia fergusonii Becca 0.20 EFB2_02196 Ribonuclease D 0.50 EFB2_02033 UvrABC system protein C low > 86
Vibrio cholerae E7946 ATCC 55056 0.20 CSW01_09900 ribonuclease D 0.45 CSW01_06140 excinuclease ABC subunit C low > 62
Enterobacter sp. TBS_079 0.20 MPMX20_02710 Ribonuclease D 0.48 MPMX20_02838 UvrABC system protein C low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.20 GFF2819 Ribonuclease D (EC 3.1.26.3) 0.49 GFF1700 Excinuclease ABC subunit C low > 78
Dickeya dadantii 3937 0.20 DDA3937_RS11220 ribonuclease D 0.48 DDA3937_RS13700 excinuclease ABC subunit UvrC low > 74
Azospirillum sp. SherDot2 0.20 MPMX19_00986 Ribonuclease D 0.38 MPMX19_01070 UvrABC system protein C low > 112
Dickeya dianthicola 67-19 0.20 HGI48_RS11255 ribonuclease D 0.48 HGI48_RS13795 excinuclease ABC subunit UvrC low > 71
Dickeya dianthicola ME23 0.19 DZA65_RS11600 ribonuclease D 0.48 DZA65_RS14285 excinuclease ABC subunit UvrC low > 75
Alteromonas macleodii MIT1002 0.19 MIT1002_02587 Ribonuclease D 0.50 MIT1002_02153 Excinuclease ABC subunit C low > 70
Azospirillum brasilense Sp245 0.19 AZOBR_RS16220 ribonuclease D 0.39 AZOBR_RS08965 excinuclease ABC subunit C low > 97
Erwinia tracheiphila SCR3 0.19 LU632_RS13130 rnd ribonuclease D 0.47 LU632_RS10195 uvrC excinuclease ABC subunit UvrC low > 74
Sphingomonas koreensis DSMZ 15582 0.18 Ga0059261_0222 ribonuclease D 0.37 Ga0059261_3186 Excinuclease ABC subunit C — —
Caulobacter crescentus NA1000 Δfur 0.18 CCNA_01776 ribonuclease D 0.37 CCNA_02975 excinuclease ABC subunit C — —
Caulobacter crescentus NA1000 0.18 CCNA_01776 ribonuclease D 0.37 CCNA_02975 excinuclease ABC subunit C — —
Acinetobacter radioresistens SK82 0.17 MPMX26_01642 Ribonuclease D 0.44 MPMX26_00228 UvrABC system protein C low > 36
Rhizobium sp. OAE497 0.17 ABIE40_RS06640 ribonuclease D 0.36 ABIE40_RS06500 excinuclease ABC subunit UvrC — —
Rhodopseudomonas palustris CGA009 0.17 TX73_015755 ribonuclease D 0.39 TX73_006010 excinuclease ABC subunit UvrC 0.44 54

Not shown: 1 genomes with orthologs for ABZR86_RS07350 only; 36 genomes with orthologs for ABZR86_RS02245 only