Conservation of cofitness between A4249_RS09095 and A4249_RS01115 in Brevundimonas sp. GW460-12-10-14-LB2

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Brevundimonas sp. GW460-12-10-14-LB2 1.0 A4249_RS09095 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha 1.0 A4249_RS01115 LysR substrate-binding domain-containing protein 0.48 13
Rhodopseudomonas palustris CGA009 0.63 TX73_021680 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha 0.47 TX73_009100 LysR family transcriptional regulator — —
Bosea sp. OAE506 0.60 ABIE41_RS09280 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha 0.14 ABIE41_RS18395 LysR family transcriptional regulator low > 77
Azospirillum sp. SherDot2 0.59 MPMX19_01278 NAD(P) transhydrogenase subunit alpha part 1 0.46 MPMX19_00813 HTH-type transcriptional regulator CysL low > 112
Rhizobium sp. OAE497 0.55 ABIE40_RS16600 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha 0.49 ABIE40_RS15535 LysR family transcriptional regulator low > 107
Rhodospirillum rubrum S1H 0.52 Rru_A2183 NAD(P)(+) transhydrogenase (AB-specific) (NCBI) 0.47 Rru_A0606 Transcriptional Regulator, LysR family (NCBI) — —
Sphingomonas koreensis DSMZ 15582 0.52 Ga0059261_1971 NAD/NADP transhydrogenase alpha subunit 0.13 Ga0059261_3000 Transcriptional regulator low > 68
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS01340 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha 0.27 ABZR87_RS10365 LysR family transcriptional regulator low > 80
Ralstonia solanacearum PSI07 0.50 RPSI07_RS11530 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha 0.28 RPSI07_RS18655 LysR family transcriptional regulator low > 81
Pseudomonas sp. S08-1 0.49 OH686_11925 NAD(P) transhydrogenase N-domain of subunit alpha 0.27 OH686_18820 Transcriptional regulator, LysR family low > 80
Variovorax sp. OAS795 0.49 ABID97_RS04430 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha 0.19 ABID97_RS24450 LysR family transcriptional regulator — —
Ralstonia solanacearum GMI1000 0.49 RS_RS13660 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha 0.27 RS_RS05515 LysR family transcriptional regulator low > 80
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS17490 NADP transhydrogenase subunit alpha 0.27 RR42_RS13965 LysR family transcriptional regulator low > 128
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_5016 Alanine dehydrogenase/PNT, C-terminal:Alanine dehydrogenase/PNT, N-terminal 0.27 Psyr_1386 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_5016 Alanine dehydrogenase/PNT, C-terminal:Alanine dehydrogenase/PNT, N-terminal 0.27 Psyr_1386 transcriptional regulator, LysR family low > 86
Pseudomonas putida KT2440 0.48 PP_0156 pyridine nucleotide transhydrogenase subunit alpha 0.29 PP_1637 Transcriptional regulator, LysR family low > 96
Pseudomonas fluorescens FW300-N2C3 0.48 AO356_10860 NADP transhydrogenase subunit alpha 0.29 AO356_05630 LysR family transcriptional regulator 0.44 12
Castellaniella sp019104865 MT123 0.48 ABCV34_RS10170 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha 0.22 ABCV34_RS05920 LysR substrate-binding domain-containing protein low > 48
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_4038 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) 0.29 Pf6N2E2_2984 LysR family transcriptional regulator PA3398 low > 103
Pseudomonas stutzeri RCH2 0.47 Psest_4203 NAD/NADP transhydrogenase alpha subunit 0.29 Psest_2863 Transcriptional regulator low > 67
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS05770 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha 0.28 RALBFv3_RS14705 LysR family transcriptional regulator low > 76
Ralstonia solanacearum UW163 0.47 UW163_RS07855 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha 0.28 UW163_RS12175 LysR family transcriptional regulator — —
Pseudomonas sp. RS175 0.47 PFR28_04725 NAD(P) transhydrogenase subunit alpha part 1 0.29 PFR28_00480 HTH-type transcriptional activator CmpR 0.25 46
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS03370 NAD(P) transhydrogenase subunit alpha 0.19 BPHYT_RS11310 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_11090 NADP transhydrogenase subunit alpha 0.29 AO353_16845 LysR family transcriptional regulator low > 101
Variovorax sp. SCN45 0.47 GFF4908 NAD(P) transhydrogenase N-domain of subunit alpha (EC 1.6.1.2) 0.27 GFF1740 Transcriptional regulator, LysR family low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.47 GFF2603 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) 0.20 GFF2192 Cys regulon transcriptional activator CysB low > 90
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_556 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) 0.26 PfGW456L13_4660 LysR family transcriptional regulator PA3398 low > 87
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_1818 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) 0.29 Pf1N1B4_3152 LysR family transcriptional regulator PA3398 low > 87
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS26730 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha 0.20 QEN71_RS07245 LysR family transcriptional regulator low > 153
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS00555 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha 0.28 PFLU_RS05920 LysR family transcriptional regulator low > 109
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS03480 NAD(P) transhydrogenase subunit alpha 0.21 HSERO_RS21575 transcriptional regulator low > 78
Pseudomonas fluorescens SBW25 0.45 PFLU_RS00555 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha 0.28 PFLU_RS05920 LysR family transcriptional regulator low > 109
Pseudomonas simiae WCS417 0.45 PS417_00570 NADP transhydrogenase subunit alpha 0.28 PS417_05850 LysR family transcriptional regulator 0.17 79
Acinetobacter radioresistens SK82 0.44 MPMX26_00528 NAD(P) transhydrogenase subunit alpha part 1 0.28 MPMX26_02541 HTH-type transcriptional regulator CysL — —
Dechlorosoma suillum PS 0.42 Dsui_2935 NAD/NADP transhydrogenase alpha subunit 0.26 Dsui_2229 transcriptional regulator low > 51
Shewanella loihica PV-4 0.40 Shew_0664 NAD(P) transhydrogenase subunit alpha (RefSeq) 0.23 Shew_2531 LysR family transcriptional regulator (RefSeq) low > 60
Synechococcus elongatus PCC 7942 0.35 Synpcc7942_1612 pntA pyridine nucleotide transhydrogenase alpha subunit 0.23 Synpcc7942_1980 rbcR transcriptional regulator, LysR family — —
Bifidobacterium breve UCC2003 0.34 BBR_RS15185 NAD(P) transhydrogenase subunit alpha 0.12 BBR_RS13510 LysR family transcriptional regulator low > 34
Echinicola vietnamensis KMM 6221, DSM 17526 0.14 Echvi_0201 alanine dehydrogenase 0.24 Echvi_1204 Transcriptional regulator low > 79
Bacteroides stercoris CC31F 0.14 HMPREF1181_RS10690 alanine dehydrogenase 0.21 HMPREF1181_RS11950 LysR family transcriptional regulator low > 56
Bacteroides thetaiotaomicron VPI-5482 0.13 BT1554 alanine dehydrogenase (NCBI ptt file) 0.22 BT4599 putative transcriptional regulator (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.13 BACOVA_04297 alanine dehydrogenase 0.22 BACOVA_05396 LysR substrate binding domain protein low > 94
Phocaeicola vulgatus CL09T03C04 0.13 HMPREF1058_RS05025 alanine dehydrogenase 0.21 HMPREF1058_RS04990 LysR family transcriptional regulator low > 67
Phocaeicola dorei CL03T12C01 0.12 ABI39_RS18840 alanine dehydrogenase 0.21 ABI39_RS18875 LysR family transcriptional regulator low > 72
Desulfovibrio vulgaris Miyazaki F 0.10 DvMF_0517 alanine dehydrogenase (RefSeq) 0.20 DvMF_0108 transcriptional regulator, LysR family (RefSeq) low > 51
Parabacteroides merdae CL09T00C40 0.09 HMPREF1078_RS07210 alanine dehydrogenase 0.21 HMPREF1078_RS00720 LysR family transcriptional regulator low > 61
Desulfovibrio vulgaris Hildenborough JW710 0.08 DVU0571 ald alanine dehydrogenase (TIGR) 0.24 DVU1331 transcriptional regulator, LysR family (TIGR) low > 55

Not shown: 15 genomes with orthologs for A4249_RS09095 only; 38 genomes with orthologs for A4249_RS01115 only