Conservation of cofitness between Shewana3_1206 and Shewana3_3189 in Shewanella sp. ANA-3

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella sp. ANA-3 1.0 Shewana3_1206 MscS mechanosensitive ion channel (RefSeq) 1.0 Shewana3_3189 sulfate ABC transporter, periplasmic sulfate-binding protein (RefSeq) 0.66 11
Shewanella oneidensis MR-1 0.97 SO3340 hypothetical Small-conductance mechanosensitive channel (NCBI ptt file) 0.93 SO3599 cysP sulfate ABC transporter, periplasmic sulfate-binding protein (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.54 CSW01_02550 mechanosensitive ion channel protein 0.82 CSW01_02850 sulfate ABC transporter substrate-binding protein low > 62
Serratia liquefaciens MT49 0.48 IAI46_20995 small-conductance mechanosensitive channel MscS 0.60 IAI46_18510 sulfate ABC transporter substrate-binding protein low > 86
Escherichia coli Nissle 1917 0.46 ECOLIN_RS16250 small-conductance mechanosensitive channel MscS 0.59 ECOLIN_RS13920 thiosulfate/sulfate ABC transporter substrate-binding protein CysP low > 55
Escherichia fergusonii Becca 0.46 EFB2_00982 Small-conductance mechanosensitive channel 0.59 EFB2_01452 Thiosulfate-binding protein low > 86
Escherichia coli BL21 0.46 ECD_02755 mechanosensitive channel protein, small conductance 0.59 ECD_02325 thiosulfate-binding protein low > 61
Escherichia coli ECRC98 0.46 JDDGAC_23035 mscS small-conductance mechanosensitive channel MscS 0.59 JDDGAC_26100 cysP thiosulfate/sulfate ABC transporter substrate-binding protein CysP low > 86
Escherichia coli ECOR27 0.46 NOLOHH_11315 mscS small-conductance mechanosensitive channel MscS 0.59 NOLOHH_13830 cysP thiosulfate/sulfate ABC transporter substrate-binding protein CysP low > 75
Escherichia coli ECRC100 0.46 OKFHMN_19405 mscS small-conductance mechanosensitive channel MscS 0.59 OKFHMN_22150 cysP thiosulfate/sulfate ABC transporter substrate-binding protein CysP low > 80
Escherichia coli ECRC99 0.46 KEDOAH_08735 mscS small-conductance mechanosensitive channel MscS 0.59 KEDOAH_06070 cysP thiosulfate/sulfate ABC transporter substrate-binding protein CysP — —
Escherichia coli ECRC102 0.46 NIAGMN_17170 mscS small-conductance mechanosensitive channel MscS 0.59 NIAGMN_19920 cysP thiosulfate/sulfate ABC transporter substrate-binding protein CysP — —
Escherichia coli ECOR38 0.46 HEPCGN_18710 mscS small-conductance mechanosensitive channel MscS 0.58 HEPCGN_21325 cysP thiosulfate/sulfate ABC transporter substrate-binding protein CysP low > 87
Escherichia coli BW25113 0.46 b2924 mscS mechanosensitive channel (NCBI) 0.58 b2425 cysP thiosulfate transporter subunit (NCBI) low > 76
Escherichia coli ECRC62 0.46 BNILDI_09850 mscS small-conductance mechanosensitive channel MscS 0.59 BNILDI_12695 cysP thiosulfate/sulfate ABC transporter substrate-binding protein CysP low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_00792 Small-conductance mechanosensitive channel 0.59 OHPLBJKB_01298 Thiosulfate-binding protein low > 73
Escherichia coli ECRC101 0.46 MCAODC_09925 mscS small-conductance mechanosensitive channel MscS 0.59 MCAODC_12680 cysP thiosulfate/sulfate ABC transporter substrate-binding protein CysP low > 87
Rahnella sp. WP5 0.46 EX31_RS21435 small-conductance mechanosensitive channel MscS 0.59 EX31_RS20225 sulfate ABC transporter substrate-binding protein low > 89
Klebsiella michiganensis M5al 0.46 BWI76_RS23970 mechanosensitive ion channel protein MscS 0.59 BWI76_RS20705 thiosulfate transporter subunit low > 92
Erwinia tracheiphila SCR3 0.44 LU632_RS05550 mscS small-conductance mechanosensitive channel MscS 0.56 LU632_RS06695 cysP thiosulfate ABC transporter substrate-binding protein CysP — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF3019 Protein involved in stability of MscS mechanosensitive channel 0.58 GFF2059 Sulfate and thiosulfate binding protein CysP low > 78
Pectobacterium carotovorum WPP14 0.43 HER17_RS02700 small-conductance mechanosensitive channel MscS 0.59 HER17_RS17225 sulfate ABC transporter substrate-binding protein low > 75
Dickeya dadantii 3937 0.43 DDA3937_RS18505 small-conductance mechanosensitive channel MscS 0.43 DDA3937_RS15850 sulfate ABC transporter substrate-binding protein low > 74
Pantoea sp. MT58 0.42 IAI47_03700 small-conductance mechanosensitive channel MscS 0.59 IAI47_05385 sulfate ABC transporter substrate-binding protein low > 76
Enterobacter asburiae PDN3 0.42 EX28DRAFT_2970 Small-conductance mechanosensitive channel 0.59 EX28DRAFT_0205 sulfate/thiosulfate-binding protein low > 76
Dickeya dianthicola ME23 0.42 DZA65_RS19565 small-conductance mechanosensitive channel MscS 0.43 DZA65_RS17075 sulfate ABC transporter substrate-binding protein low > 75
Dickeya dianthicola 67-19 0.42 HGI48_RS18430 small-conductance mechanosensitive channel MscS 0.43 HGI48_RS15990 sulfate ABC transporter substrate-binding protein 0.44 58
Enterobacter sp. TBS_079 0.42 MPMX20_03776 Small-conductance mechanosensitive channel 0.59 MPMX20_03317 Thiosulfate-binding protein low > 85
Pseudomonas stutzeri RCH2 0.42 Psest_1143 Small-conductance mechanosensitive channel 0.47 Psest_4060 sulfate/thiosulfate-binding protein low > 67
Pseudomonas sp. RS175 0.40 PFR28_03424 Small-conductance mechanosensitive channel 0.46 PFR28_03117 Sulfate-binding protein low > 88
Marinobacter adhaerens HP15 0.39 HP15_3381 MscS mechanosensitive ion channel 0.63 HP15_1344 thiosulfate transporter subunit low > 73
Pseudomonas simiae WCS417 0.39 PS417_22505 mechanosensitive ion channel protein MscS 0.45 PS417_08775 thiosulfate transporter subunit low > 88
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS24145 mechanosensitive ion channel 0.45 PFLU_RS08835 sulfate ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens SBW25 0.37 PFLU_RS24145 mechanosensitive ion channel 0.45 PFLU_RS08835 sulfate ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_17965 mechanosensitive ion channel protein MscS 0.46 AO356_19585 thiosulfate transporter subunit low > 104
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_649 Small-conductance mechanosensitive channel 0.46 Pf1N1B4_3654 Sulfate and thiosulfate binding protein CysP low > 87
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS12290 mechanosensitive ion channel domain-containing protein 0.41 ABZR86_RS02880 sulfate ABC transporter substrate-binding protein low > 74
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_5523 Small-conductance mechanosensitive channel 0.46 Pf6N2E2_5832 Sulfate and thiosulfate binding protein CysP low > 103
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_03635 mechanosensitive ion channel protein MscS 0.44 AO353_01955 thiosulfate transporter subunit low > 101
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS37450 mechanosensitive ion channel protein MscS 0.41 RR42_RS12295 ABC transporter permease low > 128
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_1841 Small-conductance mechanosensitive channel 0.47 PfGW456L13_4302 Sulfate and thiosulfate binding protein CysP low > 87
Castellaniella sp019104865 MT123 0.32 ABCV34_RS00345 mechanosensitive ion channel family protein 0.41 ABCV34_RS03935 sulfate ABC transporter substrate-binding protein low > 48
Pseudomonas putida KT2440 0.31 PP_1353 conserved membrane protein of unknown function 0.45 PP_4305 sulfate ABC transporter low > 96
Rhodanobacter sp. FW510-T8 0.31 OKGIIK_12610 Small-conductance mechanosensitive channel 0.42 OKGIIK_10935 ABC transporter permease low > 52
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_4086 MscS Mechanosensitive ion channel 0.45 Psyr_3383 extracellular solute-binding protein, family 1 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_4086 MscS Mechanosensitive ion channel 0.45 Psyr_3383 extracellular solute-binding protein, family 1 low > 86
Caulobacter crescentus NA1000 Δfur 0.30 CCNA_03727 small-conductance mechanosensitive channel mcsS 0.42 CCNA_00288 ABC-type sulfate transport system, periplasmic component low > 67
Caulobacter crescentus NA1000 0.30 CCNA_03727 small-conductance mechanosensitive channel mcsS 0.42 CCNA_00288 ABC-type sulfate transport system, periplasmic component low > 66
Pseudomonas sp. S08-1 0.28 OH686_08205 Small-conductance mechanosensitive channel 0.45 OH686_11670 Sulfate and thiosulfate binding protein CysP low > 80
Ralstonia solanacearum IBSBF1503 0.27 RALBFv3_RS05475 mechanosensitive ion channel family protein 0.43 RALBFv3_RS00035 sulfate ABC transporter substrate-binding protein low > 76
Ralstonia solanacearum UW163 0.27 UW163_RS08150 mechanosensitive ion channel family protein 0.43 UW163_RS13365 sulfate ABC transporter substrate-binding protein — —
Rhizobium sp. OAE497 0.27 ABIE40_RS06130 mechanosensitive ion channel domain-containing protein 0.42 ABIE40_RS24590 sulfate ABC transporter substrate-binding protein low > 107
Ralstonia solanacearum GMI1000 0.27 RS_RS13330 mechanosensitive ion channel family protein 0.43 RS_RS06700 sulfate ABC transporter substrate-binding protein low > 80
Ralstonia solanacearum PSI07 0.26 RPSI07_RS11830 mechanosensitive ion channel family protein 0.43 RPSI07_RS17445 sulfate ABC transporter substrate-binding protein low > 81
Ralstonia sp. UNC404CL21Col 0.26 ABZR87_RS01115 mechanosensitive ion channel family protein 0.43 ABZR87_RS11490 sulfate ABC transporter substrate-binding protein low > 80
Herbaspirillum seropedicae SmR1 0.25 HSERO_RS17760 mechanosensitive ion channel protein MscS 0.47 HSERO_RS08185 sulfate transporter subunit low > 78
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS06305 small mechanosensitive ion channel protein MscS 0.46 BPHYT_RS02145 sulfate ABC transporter substrate-binding protein low > 109
Paraburkholderia sabiae LMG 24235 0.24 QEN71_RS26425 mechanosensitive ion channel family protein 0.49 QEN71_RS01080 sulfate ABC transporter substrate-binding protein low > 153
Agrobacterium fabrum C58 0.22 Atu1050 hypothetical protein 0.49 Atu3504 sulfate ABC transporter substrate-binding protein low > 89
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_04714 small conductance mechanosensitive channel 0.46 H281DRAFT_02098 sulfate transport system substrate-binding protein low > 103

Not shown: 19 genomes with orthologs for Shewana3_1206 only; 17 genomes with orthologs for Shewana3_3189 only