| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Shewanella sp. ANA-3 | 1.0 | Shewana3_1494 | | hypothetical protein (RefSeq) | 1.0 | Shewana3_0390 | | diaminopimelate decarboxylase (RefSeq) | 0.73 | 20 |
| Shewanella oneidensis MR-1 | 0.85 | SO3051 | | hypothetical xanthine dehydrogenase accessory factor (NCBI ptt file) | 0.96 | SO4309 | lysA | diaminopimelate decarboxylase (NCBI ptt file) | low | > 76 |
| Shewanella loihica PV-4 | 0.47 | Shew_2268 | | hypothetical protein (RefSeq) | 0.83 | Shew_0322 | | diaminopimelate decarboxylase (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.43 | Sama_3436 | | hypothetical protein (RefSeq) | 0.82 | Sama_3250 | | diaminopimelate decarboxylase (RefSeq) | low | > 62 |
| Alteromonas macleodii MIT1002 | 0.29 | MIT1002_02320 | | putative xanthine dehydrogenase subunit A | 0.69 | MIT1002_00160 | | Diaminopimelate decarboxylase | low | > 70 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.22 | CA265_RS12605 | | alanine dehydrogenase | 0.31 | CA265_RS09650 | | diaminopimelate decarboxylase | low | > 88 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.21 | CA264_10495 | | alanine dehydrogenase | 0.32 | CA264_02390 | | diaminopimelate decarboxylase | low | > 74 |
| Pseudomonas fluorescens FW300-N2C3 | 0.21 | AO356_30450 | | xanthine dehydrogenase | 0.63 | AO356_12740 | | diaminopimelate decarboxylase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.21 | Pf6N2E2_1951 | | Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family | 0.63 | Pf6N2E2_4419 | | Diaminopimelate decarboxylase (EC 4.1.1.20) | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.21 | ABZR88_RS15300 | | XdhC family protein | 0.30 | ABZR88_RS10180 | | diaminopimelate decarboxylase | — | — |
| Pseudomonas sp. S08-1 | 0.18 | OH686_18555 | | Xanthine and CO maturation factor, XdhC/CoxF family | 0.61 | OH686_13800 | | diaminopimelate decarboxylase | low | > 80 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.18 | Echvi_4168 | | Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family | 0.23 | Echvi_1295 | | diaminopimelate decarboxylase (EC 4.1.1.20) (from data) | low | > 79 |
| Pseudomonas putida KT2440 | 0.18 | PP_2480 | | putative Xanthine dehydrogenase accessory factor | 0.64 | PP_5227 | | diaminopimelate decarboxylase | low | > 96 |
| Lysobacter sp. OAE881 | 0.15 | ABIE51_RS02905 | | XdhC family protein | 0.39 | ABIE51_RS13675 | | diaminopimelate decarboxylase | low | > 62 |
| Paraburkholderia graminis OAS925 | 0.14 | ABIE53_000440 | | xanthine dehydrogenase accessory factor | 0.57 | ABIE53_003749 | | diaminopimelate decarboxylase | low | > 113 |
| Burkholderia phytofirmans PsJN | 0.13 | BPHYT_RS01740 | | hypothetical protein | 0.57 | BPHYT_RS17930 | | diaminopimelate decarboxylase | low | > 109 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.13 | H281DRAFT_02187 | | predicted sulfurylase large subunit, molybdopterin cytosine dinucleotide biosynthesis /predicted sulfurylase small subunit, molybdopterin cytosine dinucleotide biosynthesis | 0.57 | H281DRAFT_05606 | | diaminopimelate decarboxylase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.13 | ABZR86_RS03510 | | XdhC/CoxI family protein | 0.39 | ABZR86_RS12130 | | diaminopimelate decarboxylase | low | > 74 |
| Paraburkholderia sabiae LMG 24235 | 0.13 | QEN71_RS15635 | | XdhC family protein | 0.60 | QEN71_RS28080 | | diaminopimelate decarboxylase | low | > 153 |
| Ralstonia solanacearum PSI07 | 0.12 | RPSI07_RS04210 | | carbon monoxide dehydrogenase accessory protein (coxi) | 0.57 | RPSI07_RS10250 | | diaminopimelate decarboxylase | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.12 | DvMF_0635 | | protein of unknown function DUF182 (RefSeq) | 0.54 | DvMF_0353 | | diaminopimelate decarboxylase (RefSeq) | low | > 51 |
| Cupriavidus basilensis FW507-4G11 | 0.12 | RR42_RS02340 | | lipoprotein | 0.55 | RR42_RS19050 | | diaminopimelate decarboxylase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.12 | HSERO_RS06675 | | xanthine/CO dehydrogenase maturation protein | 0.54 | HSERO_RS00950 | | diaminopimelate decarboxylase | — | — |
| Ralstonia solanacearum GMI1000 | 0.12 | RS_RS03155 | | lipoprotein | 0.57 | RS_RS14930 | | diaminopimelate decarboxylase | — | — |
| Phaeobacter inhibens DSM 17395 | 0.11 | PGA1_c20900 | | Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family | 0.46 | PGA1_c03470 | | diaminopimelate decarboxylase LysA | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.11 | RALBFv3_RS20710 | | lipoprotein | 0.57 | RALBFv3_RS06990 | | diaminopimelate decarboxylase | — | — |
| Marinobacter adhaerens HP15 | 0.11 | HP15_1259 | | xanthine dehydrogenase accessory factor | 0.69 | HP15_247 | | diaminopimelate decarboxylase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.11 | ABZR87_RS12230 | | XdhC family protein | 0.56 | ABZR87_RS02640 | | diaminopimelate decarboxylase | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.11 | Psest_3448 | | Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family | 0.62 | Psest_3764 | | diaminopimelate decarboxylase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.11 | Dshi_2351 | | protein of unknown function DUF182 (RefSeq) | 0.46 | Dshi_3059 | | diaminopimelate decarboxylase (RefSeq) | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.10 | GFF5378 | | Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family | 0.53 | GFF1341 | | Diaminopimelate decarboxylase (EC 4.1.1.20) | low | > 90 |
| Pseudomonas fluorescens GW456-L13 | 0.10 | PfGW456L13_3924 | | Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family | 0.64 | PfGW456L13_845 | | Diaminopimelate decarboxylase (EC 4.1.1.20) | low | > 87 |
| Magnetospirillum magneticum AMB-1 | 0.10 | AMB_RS10210 | | xanthine and CO dehydrogenase maturation factor | 0.46 | AMB_RS22725 | | diaminopimelate decarboxylase | — | — |
| Ralstonia solanacearum UW163 | 0.09 | UW163_RS14010 | | carbon monoxide dehydrogenase accessory protein | 0.57 | UW163_RS06625 | | diaminopimelate decarboxylase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.09 | AO353_27060 | | XshC-Cox1 family protein | 0.62 | AO353_09035 | | diaminopimelate decarboxylase | — | — |
| Variovorax sp. OAS795 | 0.09 | ABID97_RS09425 | | XdhC family protein | 0.53 | ABID97_RS23305 | | diaminopimelate decarboxylase | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.08 | DVU1552 | b2875 | conserved hypothetical protein (TIGR) | 0.52 | DVU1647 | lysA-1 | diaminopimelate decarboxylase (TIGR) | low | > 55 |
| Serratia liquefaciens MT49 | 0.08 | IAI46_21360 | | XdhC family protein | 0.19 | IAI46_20520 | | diaminopimelate decarboxylase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.08 | Psyr_2391 | | Protein of unknown function DUF182 | 0.63 | Psyr_0182 | | diaminopimelate decarboxylase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.08 | Psyr_2391 | | Protein of unknown function DUF182 | 0.63 | Psyr_0182 | | diaminopimelate decarboxylase | — | — |
| Variovorax sp. SCN45 | 0.08 | GFF6160 | | Dehydrogenase molybdenum cofactor insertion protein, XdhC/CoxF family | 0.53 | GFF5315 | | Diaminopimelate decarboxylase (EC 4.1.1.20) | — | — |
| Pantoea sp. MT58 | 0.07 | IAI47_19405 | | XdhC family protein | 0.16 | IAI47_03860 | | diaminopimelate decarboxylase | low | > 76 |
Not shown: 0 genomes with orthologs for Shewana3_1494 only; 59 genomes with orthologs for Shewana3_0390 only