Conservation of cofitness between Sama_0885 and Sama_0773 in Shewanella amazonensis SB2B

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_0885 hypothetical protein (RefSeq) 1.0 Sama_0773 ABC-type polysaccharide/polyol phosphate export systems permease component (RefSeq) 0.29 19
Shewanella sp. ANA-3 0.65 Shewana3_3021 hypothetical protein (RefSeq) 0.87 Shewana3_0795 ABC-2 type transporter (RefSeq) low > 73
Shewanella loihica PV-4 0.62 Shew_1059 hypothetical protein (RefSeq) 0.88 Shew_3140 ABC-2 type transporter (RefSeq) low > 60
Shewanella oneidensis MR-1 0.58 SO1353 conserved hypothetical protein (NCBI ptt file) 0.87 SO3801 ABC transporter, permease protein (NCBI ptt file) low > 76
Pseudomonas sp. DMC3 0.35 GFF4245 hypothetical protein 0.61 GFF4780 Inner membrane transport permease YadH low > 89
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_482 FIG028593: membrane protein 0.61 PfGW456L13_2081 ABC-type multidrug transport system, permease component low > 87
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS20525 Mpo1-like protein 0.34 ABZR87_RS02520 ABC transporter permease low > 80
Pseudomonas simiae WCS417 0.33 PS417_00950 membrane protein 0.61 PS417_09205 membrane protein 0.17 36
Pseudomonas sp. SVBP6 0.32 COO64_RS12300 DUF962 domain-containing protein 0.62 COO64_RS05900 ABC transporter permease low > 93
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF227 FIG028593: membrane protein 0.35 GFF1318 ABC-type multidrug transport system, permease component low > 90
Pseudomonas fluorescens SBW25 0.32 PFLU_RS00965 DUF962 domain-containing protein 0.61 PFLU_RS09215 ABC transporter permease low > 109
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS00965 DUF962 domain-containing protein 0.61 PFLU_RS09215 ABC transporter permease low > 109
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_1723 FIG028593: membrane protein 0.59 Pf1N1B4_475 ABC-type multidrug transport system, permease component low > 87
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_3998 FIG028593: membrane protein 0.59 Pf6N2E2_5928 ABC-type multidrug transport system, permease component low > 103
Pseudomonas sp. RS175 0.31 PFR28_04769 hypothetical protein 0.60 PFR28_03033 Inner membrane transport permease YadH low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_0242 Protein of unknown function DUF962 0.60 Psyr_1631 ABC-2 low > 86
Pseudomonas aeruginosa PA14 0.31 IKLFDK_24080 2-hydroxy-palmitic acid dioxygenase Mpo1-like 0.62 IKLFDK_14225 ABC transporter permease low > 101
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_0242 Protein of unknown function DUF962 0.60 Psyr_1631 ABC-2 low > 86
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_10650 hypothetical protein 0.59 AO356_20050 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_11560 hypothetical protein 0.60 AO353_01480 hypothetical protein low > 101
Pseudomonas putida KT2440 0.31 PP_1382 putative porin-encoding gene 0.61 PP_1896 putative ABC transporter - permease subunit low > 96
Ralstonia solanacearum IBSBF1503 0.31 RALBFv3_RS19885 DUF962 domain-containing protein 0.32 RALBFv3_RS06865 ABC transporter permease low > 76
Ralstonia solanacearum UW163 0.31 UW163_RS19290 DUF962 domain-containing protein 0.32 UW163_RS06750 ABC transporter permease
Alteromonas macleodii MIT1002 0.30 MIT1002_02906 hypothetical protein 0.68 MIT1002_03699 Inner membrane transport permease YadH low > 70
Ralstonia solanacearum PSI07 0.30 RPSI07_RS03325 DUF962 domain-containing protein 0.33 RPSI07_RS10370 ABC transporter permease low > 81
Pseudomonas sp. BP01 0.30 JOY50_RS14425 DUF962 domain-containing protein 0.58 JOY50_RS16885 ABC transporter permease low > 84
Paraburkholderia sabiae LMG 24235 0.30 QEN71_RS16355 DUF962 domain-containing protein 0.34 QEN71_RS20370 ABC transporter permease low > 153
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS29005 membrane protein 0.35 RR42_RS18935 metal-dependent hydrolase low > 128
Pseudomonas sp. S08-1 0.29 OH686_11915 hypothetical protein 0.58 OH686_22660 Uncharacterized efflux ABC transporter, permease protein YadH low > 80
Pseudomonas stutzeri RCH2 0.29 Psest_3798 Predicted membrane protein 0.62 Psest_2715 ABC-type polysaccharide/polyol phosphate export systems, permease component low > 67
Paraburkholderia graminis OAS925 0.29 ABIE53_004633 putative membrane protein YGL010W 0.34 ABIE53_005060 ABC-2 type transport system permease protein 0.21 42
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS34865 membrane protein 0.34 BPHYT_RS29970 sugar ABC transporter permease low > 109
Acidovorax sp. GW101-3H11 0.28 Ac3H11_497 FIG028593: membrane protein 0.29 Ac3H11_4719 ABC-type multidrug transport system, permease component low > 79
Paraburkholderia bryophila 376MFSha3.1 0.28 H281DRAFT_03623 Uncharacterized membrane protein YGL010W 0.35 H281DRAFT_02997 ABC-2 type transport system permease protein low > 103
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_12455 2-hydroxy-palmitic acid dioxygenase Mpo1-like 0.56 OKGIIK_16615 ABC transporter permease 0.62 6
Ralstonia solanacearum GMI1000 0.26 RS_RS20970 DUF962 domain-containing protein 0.32 RS_RS14810 ABC transporter permease low > 80
Rhodanobacter sp000427505 FW510-R12 0.24 LRK53_RS04260 DUF962 domain-containing protein 0.55 LRK53_RS01380 ABC transporter permease low > 60
Rhodanobacter denitrificans FW104-10B01 0.23 LRK54_RS11370 DUF962 domain-containing protein 0.55 LRK54_RS07020 ABC transporter permease low > 59
Rhodanobacter denitrificans MT42 0.23 LRK55_RS11100 DUF962 domain-containing protein 0.55 LRK55_RS06760 ABC transporter permease low > 63
Lysobacter sp. OAE881 0.22 ABIE51_RS04120 Mpo1-like protein 0.57 ABIE51_RS00695 ABC transporter permease low > 62
Variovorax sp. SCN45 0.20 GFF2311 Putative PRS2 protein 0.31 GFF5341 Efflux ABC transporter, permease protein low > 127
Xanthomonas campestris pv. campestris strain 8004 0.20 Xcc-8004.591.1 FIG01209882: hypothetical protein 0.57 Xcc-8004.5048.1 permease low > 74
Variovorax sp. OAS795 0.19 ABID97_RS23895 Mpo1-like protein 0.30 ABID97_RS23180 ABC transporter permease low > 91
Acinetobacter radioresistens SK82 0.17 MPMX26_02110 hypothetical protein 0.61 MPMX26_02104 Inner membrane transport permease YadH
Dyella japonica UNC79MFTsu3.2 0.14 ABZR86_RS12220 Mpo1-like protein 0.58 ABZR86_RS16405 ABC transporter permease low > 74

Not shown: 3 genomes with orthologs for Sama_0885 only; 50 genomes with orthologs for Sama_0773 only