Conservation of cofitness between Dshi_1649 and Dshi_0821 in Dinoroseobacter shibae DFL-12

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dinoroseobacter shibae DFL-12 1.0 Dshi_1649 alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) (from data) 1.0 Dshi_0821 Glycine hydroxymethyltransferase (RefSeq) 0.45 12
Phaeobacter inhibens DSM 17395 0.73 PGA1_c07890 cytoplasmic trehalase (AlgA) (from data) 0.82 PGA1_c11870 serine hydroxymethyltransferase GlyA 0.30 16
Rhizobium sp. OAE497 0.63 ABIE40_RS03175 alpha-glucosidase 0.70 ABIE40_RS06715 serine hydroxymethyltransferase
Sinorhizobium meliloti 1021 0.63 SMc03064 alpha-glucosidase 0.70 SMc01770 serine hydroxymethyltransferase low > 103
Agrobacterium fabrum C58 0.62 Atu0594 alpha-glucosidase 0.70 Atu1165 serine hydroxymethyltransferase
Shewanella amazonensis SB2B 0.51 Sama_1662 alpha amylase, catalytic region (RefSeq) 0.58 Sama_1014 glyA serine hydroxymethyltransferase (RefSeq) low > 62
Shewanella loihica PV-4 0.51 Shew_1889 alpha amylase, catalytic region (RefSeq) 0.57 Shew_1185 glyA serine hydroxymethyltransferase (RefSeq) 0.65 7
Rhodanobacter sp. FW510-T8 0.51 OKGIIK_02445 amyA alpha-glucosidase 0.57 OKGIIK_11440 glyA serine hydroxymethyltransferase low > 52
Lysobacter sp. OAE881 0.51 ABIE51_RS18995 alpha-glucosidase family protein 0.58 ABIE51_RS04620 serine hydroxymethyltransferase low > 62
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.2057.1 Maltodextrin glucosidase (EC 3.2.1.20) 0.59 Xcc-8004.4398.1 Serine hydroxymethyltransferase (EC 2.1.2.1) low > 74
Rhodanobacter denitrificans MT42 0.50 LRK55_RS12785 alpha-glucosidase family protein 0.58 LRK55_RS04400 serine hydroxymethyltransferase low > 63
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS13085 alpha-glucosidase family protein 0.58 LRK54_RS04625 serine hydroxymethyltransferase low > 59
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS16975 alpha-glucosidase 0.58 ABZR86_RS10715 serine hydroxymethyltransferase low > 74
Pseudomonas stutzeri RCH2 0.49 Psest_0870 Alpha-glucosidase (EC 3.2.1.20) (from data) 0.58 Psest_3404 Glycine/serine hydroxymethyltransferase
Shewanella sp. ANA-3 0.49 Shewana3_2311 Alpha-glucosidase (EC 3.2.1.20) (from data) 0.57 Shewana3_1094 glyA serine hydroxymethyltransferase (RefSeq) low > 73
Variovorax sp. SCN45 0.49 GFF6332 Maltodextrin glucosidase (EC 3.2.1.20) 0.54 GFF560 Serine hydroxymethyltransferase (EC 2.1.2.1)
Shewanella oneidensis MR-1 0.48 SO2213 oligo-1,6-glucosidase (NCBI ptt file) 0.57 SO3471 glyA serine hydroxymethyltransferase (NCBI ptt file) low > 76
Brevundimonas sp. GW460-12-10-14-LB2 0.46 A4249_RS09955 alpha-amylase family glycosyl hydrolase 0.62 A4249_RS06040 serine hydroxymethyltransferase
Sphingomonas koreensis DSMZ 15582 0.45 Ga0059261_1580 Glycosidases 0.63 Ga0059261_1986 Glycine/serine hydroxymethyltransferase 0.57 63
Caulobacter crescentus NA1000 0.44 CCNA_02368 alpha-glucosidase 0.67 CCNA_01419 serine hydroxymethyltransferase
Caulobacter crescentus NA1000 Δfur 0.44 CCNA_02368 alpha-glucosidase 0.67 CCNA_01419 serine hydroxymethyltransferase low > 67
Azospirillum sp. SherDot2 0.37 MPMX19_04220 Oligo-1,6-glucosidase 1 0.68 MPMX19_00727 Serine hydroxymethyltransferase 2
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS19395 alpha-amylase family glycosyl hydrolase 0.67 QEN71_RS08310 serine hydroxymethyltransferase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_02777 alpha-glucosidase 0.68 H281DRAFT_02468 serine hydroxymethyltransferase low > 103
Azospirillum brasilense Sp245 0.35 AZOBR_RS25735 alpha-amylase 0.69 AZOBR_RS10015 serine hydroxymethyltransferase
Rhodopseudomonas palustris CGA009 0.35 TX73_024730 alpha-amylase family glycosyl hydrolase 0.67 TX73_014115 serine hydroxymethyltransferase
Variovorax sp. OAS795 0.33 ABID97_RS27345 alpha-amylase family glycosyl hydrolase 0.54 ABID97_RS17890 serine hydroxymethyltransferase
Rhodospirillum rubrum S1H 0.32 Rru_A2294 Alpha amylase, catalytic region (NCBI) 0.69 Rru_A1827 Glycine hydroxymethyltransferase (NCBI) low > 58
Pseudomonas sp. RS175 0.30 PFR28_01852 Oligo-1,6-glucosidase 1 0.57 PFR28_04135 Serine hydroxymethyltransferase low > 88
Rahnella sp. WP5 0.27 EX31_RS10265 alpha-glucosidase 0.57 EX31_RS20585 serine hydroxymethyltransferase
Serratia liquefaciens MT49 0.26 IAI46_12925 alpha-glucosidase 0.56 IAI46_19395 serine hydroxymethyltransferase
Pseudomonas fluorescens SBW25-INTG 0.25 PFLU_RS24710 alpha,alpha-phosphotrehalase 0.57 PFLU_RS27825 serine hydroxymethyltransferase low > 109
Pseudomonas fluorescens SBW25 0.25 PFLU_RS24710 alpha,alpha-phosphotrehalase 0.57 PFLU_RS27825 serine hydroxymethyltransferase low > 109
Pseudomonas simiae WCS417 0.24 PS417_23045 Alpha,alpha-phosphotrehalase (EC 3.2.1.93) (from data) 0.58 PS417_26195 serine hydroxymethyltransferase low > 88
Pseudomonas fluorescens FW300-N1B4 0.24 Pf1N1B4_835 Trehalose-6-phosphate hydrolase (EC 3.2.1.93) 0.57 Pf1N1B4_2454 Serine hydroxymethyltransferase (EC 2.1.2.1) (from data) low > 87
Klebsiella michiganensis M5al 0.24 BWI76_RS02960 glucohydrolase 0.53 BWI76_RS21225 serine hydroxymethyltransferase
Escherichia fergusonii Becca 0.24 EFB2_04294 Trehalose-6-phosphate hydrolase 0.53 EFB2_01345 Serine hydroxymethyltransferase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_03796 Trehalose-6-phosphate hydrolase 0.53 OHPLBJKB_01156 Serine hydroxymethyltransferase low > 73
Escherichia coli Nissle 1917 0.24 ECOLIN_RS24595 alpha,alpha-phosphotrehalase 0.53 ECOLIN_RS14440 serine hydroxymethyltransferase
Escherichia coli BL21 0.24 ECD_04107 trehalose-6-P hydrolase 0.53 ECD_02443 serine hydroxymethyltransferase low > 60
Escherichia coli ECOR38 0.24 HEPCGN_10095 treC alpha,alpha-phosphotrehalase 0.53 HEPCGN_20655 glyA serine hydroxymethyltransferase low > 85
Escherichia coli ECRC62 0.24 BNILDI_07345 treC alpha,alpha-phosphotrehalase 0.53 BNILDI_11985 glyA serine hydroxymethyltransferase
Escherichia coli ECOR27 0.24 NOLOHH_04165 treC alpha,alpha-phosphotrehalase 0.53 NOLOHH_13185 glyA serine hydroxymethyltransferase
Escherichia coli BW25113 0.24 b4239 treC trehalose-6-P hydrolase (NCBI) 0.53 b2551 glyA serine hydroxymethyltransferase (NCBI)
Pseudomonas fluorescens FW300-N2E3 0.24 AO353_15985 Alpha,alpha-phosphotrehalase (EC 3.2.1.93) (from data) 0.57 AO353_14020 serine hydroxymethyltransferase
Escherichia coli ECRC101 0.23 MCAODC_02405 treC alpha,alpha-phosphotrehalase 0.53 MCAODC_12040 glyA serine hydroxymethyltransferase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF921 Trehalose-6-phosphate hydrolase (EC 3.2.1.93) 0.55 GFF2447 Serine hydroxymethyltransferase (EC 2.1.2.1)
Escherichia coli ECRC98 0.23 JDDGAC_15540 treC alpha,alpha-phosphotrehalase 0.53 JDDGAC_25175 glyA serine hydroxymethyltransferase
Escherichia coli ECRC101 0.23 OKFHMN_11900 treC alpha,alpha-phosphotrehalase 0.53 OKFHMN_21510 glyA serine hydroxymethyltransferase
Escherichia coli ECRC102 0.23 NIAGMN_09750 treC alpha,alpha-phosphotrehalase 0.53 NIAGMN_19280 glyA serine hydroxymethyltransferase
Escherichia coli ECRC99 0.23 KEDOAH_16255 treC alpha,alpha-phosphotrehalase 0.53 KEDOAH_06710 glyA serine hydroxymethyltransferase
Vibrio cholerae E7946 ATCC 55056 0.23 CSW01_04665 alpha,alpha-phosphotrehalase 0.67 CSW01_15340 serine hydroxymethyltransferase

Not shown: 4 genomes with orthologs for Dshi_1649 only; 38 genomes with orthologs for Dshi_0821 only