Conservation of cofitness between SO2074 and SO2069 in Shewanella oneidensis MR-1

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO2074 hisG ATP phosphoribosyltransferase (NCBI ptt file) 1.0 SO2069 hisA phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (NCBI ptt file) 0.98 7
Shewanella sp. ANA-3 0.90 Shewana3_1854 hisG ATP phosphoribosyltransferase (RefSeq) 0.91 Shewana3_1849 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (RefSeq) 0.84 38
Shewanella loihica PV-4 0.85 Shew_2197 hisG ATP phosphoribosyltransferase (RefSeq) 0.78 Shew_2202 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (RefSeq) 0.90 49
Shewanella amazonensis SB2B 0.82 Sama_1941 hisG ATP phosphoribosyltransferase (RefSeq) 0.67 Sama_1946 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (RefSeq) 0.97 3
Escherichia coli BL21 0.63 ECD_01921 ATP phosphoribosyltransferase 0.62 ECD_01926 N-(5'-phospho-L-ribosyl-formimino)-5-amino-1- (5'-phosphoribosyl)-4-imidazolecarboxamide isomerase low > 61
Klebsiella pneumoniae MKP103 0.63 KDGMDA_26090 ATP phosphoribosyltransferase 0.62 KDGMDA_26115 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase low > 95
Escherichia coli ECOR38 0.63 HEPCGN_03225 hisG ATP phosphoribosyltransferase 0.61 HEPCGN_03200 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase 0.92 38
Escherichia coli ECRC62 0.63 BNILDI_14745 hisG ATP phosphoribosyltransferase 0.62 BNILDI_14720 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase 0.93 40
Escherichia coli Nissle 1917 0.63 ECOLIN_RS11940 ATP phosphoribosyltransferase 0.61 ECOLIN_RS11965 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase — —
Escherichia coli ECOR27 0.63 NOLOHH_15835 hisG ATP phosphoribosyltransferase 0.62 NOLOHH_15810 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase 0.82 3
Escherichia coli BW25113 0.63 b2019 hisG ATP phosphoribosyltransferase (NCBI) 0.61 b2024 hisA N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase (VIMSS) 0.91 30
Escherichia fergusonii Becca 0.63 EFB2_01837 ATP phosphoribosyltransferase 0.62 EFB2_01832 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_01681 ATP phosphoribosyltransferase 0.62 OHPLBJKB_01676 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase low > 74
Enterobacter asburiae PDN3 0.63 EX28DRAFT_0540 ATP phosphoribosyltransferase 0.62 EX28DRAFT_0535 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) 0.92 7
Escherichia coli ECRC98 0.63 JDDGAC_28630 hisG ATP phosphoribosyltransferase 0.62 JDDGAC_28605 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase 0.70 31
Escherichia coli ECRC102 0.63 NIAGMN_22465 hisG ATP phosphoribosyltransferase 0.62 NIAGMN_22440 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase low > 80
Escherichia coli ECRC100 0.63 OKFHMN_24520 hisG ATP phosphoribosyltransferase 0.62 OKFHMN_24495 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase 0.86 62
Enterobacter sp. TBS_079 0.63 MPMX20_03001 ATP phosphoribosyltransferase 0.61 MPMX20_03006 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 0.96 4
Escherichia coli ECRC101 0.63 MCAODC_20420 hisG ATP phosphoribosyltransferase 0.62 MCAODC_20445 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase 0.63 44
Escherichia coli ECRC99 0.63 KEDOAH_03630 hisG ATP phosphoribosyltransferase 0.62 KEDOAH_03655 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.63 GFF3913 ATP phosphoribosyltransferase (EC 2.4.2.17) 0.62 GFF3908 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) low > 78
Klebsiella michiganensis M5al 0.63 BWI76_RS18920 ATP phosphoribosyltransferase 0.62 BWI76_RS18945 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase — —
Rahnella sp. WP5 0.62 EX31_RS11435 ATP phosphoribosyltransferase 0.61 EX31_RS11460 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.83 58
Pectobacterium carotovorum WPP14 0.62 HER17_RS12225 ATP phosphoribosyltransferase 0.62 HER17_RS12250 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.95 12
Serratia liquefaciens MT49 0.62 IAI46_08215 ATP phosphoribosyltransferase 0.60 IAI46_08190 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.90 2
Dickeya dianthicola ME23 0.61 DZA65_RS10060 ATP phosphoribosyltransferase 0.62 DZA65_RS10035 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase — —
Dickeya dianthicola 67-19 0.61 HGI48_RS09750 ATP phosphoribosyltransferase 0.62 HGI48_RS09725 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase — —
Dickeya dadantii 3937 0.61 DDA3937_RS09740 ATP phosphoribosyltransferase 0.61 DDA3937_RS09715 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.90 16
Pantoea agglomerans CFBP13505 P0401 0.61 PagCFBP13505_RS01215 ATP phosphoribosyltransferase 0.62 PagCFBP13505_RS01190 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 74
Pantoea sp. MT58 0.61 IAI47_07095 ATP phosphoribosyltransferase 0.62 IAI47_07070 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.97 12
Erwinia amylovora T8 0.60 OLJFJH_12185 ATP phosphoribosyltransferase 0.59 OLJFJH_12160 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 0.81 39
Erwinia tracheiphila HP pepo 2.2 0.60 IJEDHG_19095 hisG ATP phosphoribosyltransferase 0.60 IJEDHG_19070 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase — —
Erwinia tracheiphila SCR3 0.60 LU632_RS08950 hisG ATP phosphoribosyltransferase 0.60 LU632_RS08925 hisA 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.83 18
Alteromonas macleodii MIT1002 0.59 MIT1002_02632 ATP phosphoribosyltransferase 0.63 MIT1002_02637 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 0.97 8
Vibrio cholerae E7946 ATCC 55056 0.59 CSW01_05745 ATP phosphoribosyltransferase 0.58 CSW01_05770 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 62
Brevundimonas sp. GW460-12-10-14-LB2 0.44 A4249_RS10690 ATP phosphoribosyltransferase 0.44 A4249_RS10710 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 48
Echinicola vietnamensis KMM 6221, DSM 17526 0.40 Echvi_2460 ATP phosphoribosyltransferase 0.31 Echvi_2515 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) 0.96 4
Pontibacter actiniarum KMM 6156, DSM 19842 0.39 CA264_05025 ATP phosphoribosyltransferase 0.31 CA264_05105 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 74
Dyella japonica UNC79MFTsu3.2 0.36 ABZR86_RS06735 ATP phosphoribosyltransferase 0.41 ABZR86_RS06710 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.93 16
Mucilaginibacter yixingensis YX-36 DSM 26809 0.36 ABZR88_RS06885 ATP phosphoribosyltransferase 0.29 ABZR88_RS06860 HisA/HisF-related TIM barrel protein — —
Lysobacter sp. OAE881 0.36 ABIE51_RS13330 ATP phosphoribosyltransferase 0.43 ABIE51_RS13305 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.90 47
Phocaeicola dorei CL03T12C01 0.36 ABI39_RS11830 ATP phosphoribosyltransferase 0.32 ABI39_RS19925 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.71 29
Bacteroides stercoris CC31F 0.36 HMPREF1181_RS04865 ATP phosphoribosyltransferase 0.29 HMPREF1181_RS11075 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.90 5
Rhodanobacter sp000427505 FW510-R12 0.36 LRK53_RS08455 ATP phosphoribosyltransferase 0.41 LRK53_RS08480 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.62 50
Phocaeicola vulgatus CL09T03C04 0.35 HMPREF1058_RS15870 ATP phosphoribosyltransferase 0.32 HMPREF1058_RS06170 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.95 9
Cellulophaga baltica 18 0.35 M666_RS17165 ATP phosphoribosyltransferase 0.29 M666_RS17135 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.29 35
Rhodanobacter sp. FW510-T8 0.35 OKGIIK_04945 hisG ATP phosphoribosyltransferase 0.41 OKGIIK_04970 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase 0.61 19
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS01610 ATP phosphoribosyltransferase 0.42 LRK54_RS01585 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 59
Bacteroides thetaiotaomicron VPI-5482 0.35 BT0200 ATP phosphoribosyltransferase (NCBI ptt file) 0.30 BT1379 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) 0.94 4
Rhodanobacter denitrificans MT42 0.35 LRK55_RS01390 ATP phosphoribosyltransferase 0.42 LRK55_RS01365 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 63
Bacteroides ovatus ATCC 8483 0.35 BACOVA_01235 ATP phosphoribosyltransferase 0.29 BACOVA_00220 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.95 10
Pedobacter sp. GW460-11-11-14-LB5 0.34 CA265_RS03640 ATP phosphoribosyltransferase 0.30 CA265_RS03615 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) 0.94 6
Parabacteroides merdae CL09T00C40 0.34 HMPREF1078_RS02455 ATP phosphoribosyltransferase 0.31 HMPREF1078_RS13570 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.89 11
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.2949.1 ATP phosphoribosyltransferase (EC 2.4.2.17) 0.35 Xcc-8004.2944.1 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) 0.80 1
Methanococcus maripaludis S2 0.26 MMP_RS04910 ATP phosphoribosyltransferase 0.24 MMP_RS02220 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase — —
Methanococcus maripaludis JJ 0.26 MMJJ_RS00225 ATP phosphoribosyltransferase 0.24 MMJJ_RS03085 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase — —
Bifidobacterium breve UCC2003 0.17 BBR_RS15790 ATP phosphoribosyltransferase 0.23 BBR_RS17030 bifunctional 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase/phosphoribosylanthranilate isomerase PriA 0.41 18
Mycobacterium tuberculosis H37Rv 0.17 Rv2121c ATP phosphoribosyltransferase HisG 0.25 Rv1603 Probable phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA — —
Desulfovibrio vulgaris Miyazaki F 0.15 DvMF_1963 hisG ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) 0.25 DvMF_3120 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (RefSeq) 0.97 2
Desulfovibrio vulgaris Hildenborough JW710 0.13 DVU0114 hisG ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) 0.23 DVU1038 hisA phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (TIGR) 0.92 6
Bosea sp. OAE506 0.13 ABIE41_RS22120 ATP phosphoribosyltransferase 0.22 ABIE41_RS03950 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase — —

Not shown: 1 genomes with orthologs for SO2074 only; 61 genomes with orthologs for SO2069 only