Conservation of cofitness between b0688 and b3405 in Escherichia coli BW25113

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0688 pgm phosphoglucomutase (NCBI) 1.0 b3405 ompR osmolarity response regulator (NCBI) 0.51 15
Escherichia fergusonii Becca 1.00 EFB2_03406 Phosphoglucomutase 1.00 EFB2_00423 Transcriptional regulatory protein OmpR low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03027 Phosphoglucomutase 1.00 OHPLBJKB_00298 Transcriptional regulatory protein OmpR low > 73
Escherichia coli BL21 1.00 ECD_00645 phosphoglucomutase 1.00 ECD_03257 response regulator in two-component regulatory system with EnvZ
Escherichia coli ECRC62 1.00 BNILDI_21485 pgm phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) 1.00 BNILDI_02695 ompR_G63V two-component system response regulator OmpR
Escherichia coli ECOR38 1.00 HEPCGN_01125 pgm phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) 1.00 HEPCGN_15845 ompR_G63V two-component system response regulator OmpR low > 85
Escherichia coli Nissle 1917 1.00 ECOLIN_RS03730 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) 1.00 ECOLIN_RS19455 two-component system response regulator OmpR low > 52
Escherichia coli ECRC102 1.00 NIAGMN_05155 pgm phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) 1.00 NIAGMN_14805 ompR_G63V two-component system response regulator OmpR
Escherichia coli ECOR27 1.00 NOLOHH_23480 pgm phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) 1.00 NOLOHH_08825 ompR_G63V two-component system response regulator OmpR
Escherichia coli ECRC101 1.00 MCAODC_26315 pgm phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) 1.00 MCAODC_07565 ompR_G63V two-component system response regulator OmpR
Escherichia coli ECRC99 1.00 KEDOAH_20870 pgm phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) 1.00 KEDOAH_11105 ompR_G63V two-component system response regulator OmpR
Escherichia coli ECRC101 1.00 OKFHMN_07100 pgm phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) 1.00 OKFHMN_17035 ompR_G63V two-component system response regulator OmpR
Escherichia coli ECRC98 1.00 JDDGAC_10750 pgm phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) 1.00 JDDGAC_20665 ompR_G63V two-component system response regulator OmpR
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.98 GFF4601 Phosphoglucomutase (EC 5.4.2.2) 1.00 GFF613 Two-component system response regulator OmpR low > 78
Enterobacter sp. TBS_079 0.96 MPMX20_01334 Phosphoglucomutase 1.00 MPMX20_04292 Transcriptional regulatory protein OmpR low > 85
Klebsiella michiganensis M5al 0.96 BWI76_RS08290 phosphoglucomutase, alpha-D-glucose phosphate-specific 1.00 BWI76_RS26665 DNA-binding response regulator
Enterobacter asburiae PDN3 0.96 EX28DRAFT_2287 phosphoglucomutase, alpha-D-glucose phosphate-specific 1.00 EX28DRAFT_4138 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 76
Pantoea sp. MT58 0.90 IAI47_13835 alpha-D-glucose phosphate-specific phosphoglucomutase 1.00 IAI47_01820 two-component system response regulator OmpR
Erwinia tracheiphila SCR3 0.89 LU632_RS16170 pgm phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) 1.00 LU632_RS22940 ompR two-component system response regulator OmpR
Pectobacterium carotovorum WPP14 0.89 HER17_RS15060 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) 1.00 HER17_RS01700 two-component system response regulator OmpR low > 75
Rahnella sp. WP5 0.88 EX31_RS23320 alpha-D-glucose phosphate-specific phosphoglucomutase 0.99 EX31_RS04800 two-component system response regulator OmpR low > 89
Dickeya dianthicola 67-19 0.86 HGI48_RS06400 alpha-D-glucose phosphate-specific phosphoglucomutase 1.00 HGI48_RS19750 two-component system response regulator OmpR low > 71
Serratia liquefaciens MT49 0.86 IAI46_06145 alpha-D-glucose phosphate-specific phosphoglucomutase 1.00 IAI46_23790 two-component system response regulator OmpR low > 86
Dickeya dianthicola ME23 0.86 DZA65_RS06745 alpha-D-glucose phosphate-specific phosphoglucomutase 1.00 DZA65_RS20840 two-component system response regulator OmpR low > 75
Dickeya dadantii 3937 0.86 DDA3937_RS06355 alpha-D-glucose phosphate-specific phosphoglucomutase 1.00 DDA3937_RS19620 two-component system response regulator OmpR low > 74
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_10470 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) 0.85 CSW01_13695 two-component system response regulator OmpR low > 62
Desulfovibrio vulgaris Miyazaki F 0.62 DvMF_0227 phosphoglucomutase (RefSeq) 0.40 DvMF_1631 two component transcriptional regulator, winged helix family (RefSeq) low > 51
Alteromonas macleodii MIT1002 0.61 MIT1002_01534 Phosphoglucomutase 0.83 MIT1002_03968 Transcriptional regulatory protein OmpR 0.59 23
Rhodopseudomonas palustris CGA009 0.60 TX73_007630 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) 0.45 TX73_018505 response regulator low > 86
Shewanella sp. ANA-3 0.59 Shewana3_2134 phosphoglucomutase (RefSeq) 0.82 Shewana3_4017 ompR osmolarity response regulator (RefSeq)
Caulobacter crescentus NA1000 Δfur 0.59 CCNA_00083 phosphoglucomutase/phosphomannomutase 0.37 CCNA_01240 two-component response regulator low > 67
Caulobacter crescentus NA1000 0.59 CCNA_00083 phosphoglucomutase/phosphomannomutase 0.37 CCNA_01240 two-component response regulator low > 66
Pseudomonas sp. RS175 0.59 PFR28_01741 Phosphoglucomutase 0.68 PFR28_04868 Transcriptional regulatory protein OmpR low > 88
Pseudomonas stutzeri RCH2 0.59 Psest_0039 phosphoglucomutase, alpha-D-glucose phosphate-specific 0.69 Psest_3995 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 67
Shewanella oneidensis MR-1 0.58 SO2336 pgm phosphoglucomutase, alpha-D-glucose phosphate-specific (NCBI ptt file) 0.82 SO4633 ompR transcriptional regulatory protein OmpR (NCBI ptt file) low > 76
Pseudomonas putida KT2440 0.58 PP_3578 phosphoglucomutase 0.70 PP_0246 two-component system DNA-binding response transcriptional dual regulator low > 96
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_24665 phosphoglucomutase 0.69 AO353_11745 chemotaxis protein CheY
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_1059 Phosphoglucomutase (EC 5.4.2.2) 0.69 Pf6N2E2_3905 Two-component system response regulator OmpR
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS15395 alpha-D-glucose phosphate-specific phosphoglucomutase 0.69 PFLU_RS01280 two-component system response regulator OmpR
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_27065 phosphoglucomutase 0.69 AO356_10170 chemotaxis protein CheY low > 104
Pseudomonas fluorescens SBW25 0.57 PFLU_RS15395 alpha-D-glucose phosphate-specific phosphoglucomutase 0.69 PFLU_RS01280 two-component system response regulator OmpR
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_3066 Phosphoglucomutase (EC 5.4.2.2) 0.68 PfGW456L13_427 Two-component system response regulator OmpR low > 87
Pseudomonas simiae WCS417 0.57 PS417_13395 phosphoglucomutase 0.69 PS417_01170 chemotaxis protein CheY
Pseudomonas fluorescens FW300-N1B4 0.57 Pf1N1B4_4886 Phosphoglucomutase (EC 5.4.2.2) 0.69 Pf1N1B4_1772 Two-component system response regulator OmpR
Brevundimonas sp. GW460-12-10-14-LB2 0.57 A4249_RS00035 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) 0.35 A4249_RS10315 response regulator transcription factor low > 48
Bosea sp. OAE506 0.57 ABIE41_RS01980 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) 0.47 ABIE41_RS08395 response regulator
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_2908 Phosphoglucomutase, alpha-D-glucose phosphate-specific 0.70 Psyr_0258 Two-component response regulator OmpR
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_2908 Phosphoglucomutase, alpha-D-glucose phosphate-specific 0.70 Psyr_0258 Two-component response regulator OmpR
Shewanella amazonensis SB2B 0.56 Sama_1706 phosphoglucomutase (RefSeq) 0.83 Sama_3510 ompR osmolarity response regulator (RefSeq)
Variovorax sp. OAS795 0.56 ABID97_RS15660 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) 0.64 ABID97_RS17265 two-component system response regulator OmpR low > 91
Shewanella loihica PV-4 0.56 Shew_1922 phosphoglucomutase (RefSeq) 0.82 Shew_3637 ompR osmolarity response regulator (RefSeq) low > 60
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS13360 phosphoglucomutase 0.60 HSERO_RS10760 chemotaxis protein CheY
Variovorax sp. SCN45 0.55 GFF1309 Phosphoglucomutase (EC 5.4.2.2) 0.64 GFF408 Two-component system response regulator OmpR low > 127
Bifidobacterium breve UCC2003 0.51 BBR_RS18705 alpha-D-glucose phosphate-specific phosphoglucomutase 0.37 BBR_RS19170 DNA-binding response regulator
Azospirillum brasilense Sp245 0.09 AZOBR_RS02670 phosphoglucomutase 0.47 AZOBR_RS00555 chemotaxis protein CheY low > 97
Dinoroseobacter shibae DFL-12 0.09 Dshi_2020 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I (RefSeq) 0.42 Dshi_4048 two component transcriptional regulator, winged helix family (RefSeq)
Magnetospirillum magneticum AMB-1 0.08 AMB_RS02970 alpha-D-glucose phosphate-specific phosphoglucomutase 0.47 AMB_RS16915 DNA-binding response regulator low > 64
Synechococcus elongatus PCC 7942 0.08 Synpcc7942_0156 phosphoglucomutase 0.36 Synpcc7942_1453 rpaB two component transcriptional regulator, winged helix family
Phocaeicola vulgatus CL09T03C04 0.07 HMPREF1058_RS05040 phospho-sugar mutase 0.26 HMPREF1058_RS07665 response regulator transcription factor
Phocaeicola dorei CL03T12C01 0.07 ABI39_RS18825 phospho-sugar mutase 0.26 ABI39_RS00085 response regulator transcription factor

Not shown: 12 genomes with orthologs for b0688 only; 28 genomes with orthologs for b3405 only