Conservation of cofitness between b3728 and b3386 in Escherichia coli BW25113

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3728 pstS phosphate transporter subunit (NCBI) 1.0 b3386 rpe ribulose-phosphate 3-epimerase (NCBI) 0.58 7
Escherichia fergusonii Becca 1.00 EFB2_04905 Phosphate-binding protein PstS 1.00 EFB2_00442 Ribulose-phosphate 3-epimerase
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04325 Phosphate-binding protein PstS 1.00 OHPLBJKB_00317 Ribulose-phosphate 3-epimerase
Escherichia coli ECRC62 1.00 BNILDI_04515 pstS phosphate ABC transporter substrate-binding protein PstS 1.00 BNILDI_02600 dam adenine-specific DNA-methyltransferase
Escherichia coli ECOR27 1.00 NOLOHH_07010 pstS phosphate ABC transporter substrate-binding protein PstS 1.00 NOLOHH_08920 dam adenine-specific DNA-methyltransferase
Escherichia coli BL21 1.00 ECD_03612 phosphate ABC transporter periplasmic binding protein 1.00 ECD_03238 D-ribulose-5-phosphate 3-epimerase low > 60
Escherichia coli Nissle 1917 1.00 ECOLIN_RS21450 phosphate ABC transporter substrate-binding protein PstS 1.00 ECOLIN_RS19345 ribulose-phosphate 3-epimerase low > 52
Escherichia coli ECOR38 1.00 HEPCGN_13590 pstS phosphate ABC transporter substrate-binding protein PstS 1.00 HEPCGN_15950 rpe ribulose-phosphate 3-epimerase low > 85
Escherichia coli ECRC101 1.00 MCAODC_05385 pstS phosphate ABC transporter substrate-binding protein PstS 1.00 MCAODC_07660 dam adenine-specific DNA-methyltransferase
Escherichia coli ECRC102 1.00 NIAGMN_12635 pstS phosphate ABC transporter substrate-binding protein PstS 1.00 NIAGMN_14900 dam adenine-specific DNA-methyltransferase
Escherichia coli ECRC99 1.00 KEDOAH_13270 pstS phosphate ABC transporter substrate-binding protein PstS 1.00 KEDOAH_11010 dam adenine-specific DNA-methyltransferase
Escherichia coli ECRC101 1.00 OKFHMN_14880 pstS phosphate ABC transporter substrate-binding protein PstS 1.00 OKFHMN_17130 dam adenine-specific DNA-methyltransferase
Escherichia coli ECRC98 1.00 JDDGAC_18500 pstS phosphate ABC transporter substrate-binding protein PstS 1.00 JDDGAC_20760 dam adenine-specific DNA-methyltransferase
Enterobacter asburiae PDN3 0.91 EX28DRAFT_4004 phosphate ABC transporter, phosphate-binding protein 0.98 EX28DRAFT_4156 ribulose-phosphate 3-epimerase
Enterobacter sp. TBS_079 0.91 MPMX20_04639 Phosphate-binding protein PstS 0.97 MPMX20_04275 Ribulose-phosphate 3-epimerase 0.24 46
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF1734 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) 0.97 GFF633 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) low > 78
Serratia liquefaciens MT49 0.88 IAI46_25175 phosphate ABC transporter substrate-binding protein PstS 0.89 IAI46_23685 ribulose-phosphate 3-epimerase low > 86
Klebsiella michiganensis M5al 0.88 BWI76_RS00160 phosphate ABC transporter substrate-binding protein 0.96 BWI76_RS26070 ribulose-phosphate 3-epimerase
Dickeya dianthicola ME23 0.84 DZA65_RS22540 phosphate ABC transporter substrate-binding protein PstS 0.88 DZA65_RS20745 ribulose-phosphate 3-epimerase
Dickeya dadantii 3937 0.84 DDA3937_RS21470 phosphate ABC transporter substrate-binding protein PstS 0.88 DDA3937_RS19530 ribulose-phosphate 3-epimerase
Dickeya dianthicola 67-19 0.84 HGI48_RS21560 phosphate ABC transporter substrate-binding protein PstS 0.88 HGI48_RS19660 ribulose-phosphate 3-epimerase
Pectobacterium carotovorum WPP14 0.83 HER17_RS21675 phosphate ABC transporter substrate-binding protein PstS 0.87 HER17_RS01795 ribulose-phosphate 3-epimerase low > 75
Rahnella sp. WP5 0.82 EX31_RS06070 phosphate ABC transporter substrate-binding protein PstS 0.89 EX31_RS04705 ribulose-phosphate 3-epimerase
Pantoea sp. MT58 0.77 IAI47_00235 phosphate ABC transporter substrate-binding protein PstS 0.88 IAI47_01910 ribulose-phosphate 3-epimerase
Erwinia tracheiphila SCR3 0.75 LU632_RS24880 pstS phosphate ABC transporter substrate-binding protein PstS 0.86 LU632_RS22850 rpe ribulose-phosphate 3-epimerase
Ralstonia solanacearum GMI1000 0.67 RS_RS07670 phosphate ABC transporter substrate-binding protein PstS 0.67 RS_RS14420 ribulose-phosphate 3-epimerase
Ralstonia solanacearum PSI07 0.66 RPSI07_RS15295 phosphate ABC transporter substrate-binding protein PstS 0.67 RPSI07_RS10765 ribulose-phosphate 3-epimerase
Ralstonia solanacearum IBSBF1503 0.66 RALBFv3_RS02150 phosphate ABC transporter substrate-binding protein PstS 0.68 RALBFv3_RS06475 ribulose-phosphate 3-epimerase
Ralstonia solanacearum UW163 0.66 UW163_RS15460 phosphate ABC transporter substrate-binding protein PstS 0.68 UW163_RS07150 ribulose-phosphate 3-epimerase
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS33405 phosphate ABC transporter substrate-binding protein 0.73 BPHYT_RS17380 ribulose-phosphate 3-epimerase low > 109
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS14100 phosphate ABC transporter substrate-binding protein PstS 0.68 ABZR87_RS02130 ribulose-phosphate 3-epimerase
Cupriavidus basilensis FW507-4G11 0.62 RR42_RS13470 phosphate ABC transporter substrate-binding protein 0.73 RR42_RS18285 ribulose-phosphate 3-epimerase
Paraburkholderia sabiae LMG 24235 0.62 QEN71_RS08885 phosphate ABC transporter substrate-binding protein PstS 0.73 QEN71_RS27540 ribulose-phosphate 3-epimerase
Paraburkholderia bryophila 376MFSha3.1 0.61 H281DRAFT_04411 phosphate ABC transporter substrate-binding protein, PhoT family 0.74 H281DRAFT_05717 ribulose-5-phosphate 3-epimerase low > 103
Paraburkholderia graminis OAS925 0.60 ABIE53_002995 phosphate transport system substrate-binding protein 0.74 ABIE53_003638 ribulose-phosphate 3-epimerase low > 113
Variovorax sp. SCN45 0.58 GFF1092 Phosphate ABC transporter, substrate-binding protein PstS (TC 3.A.1.7.1) 0.62 GFF6246 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) low > 127
Variovorax sp. OAS795 0.57 ABID97_RS14595 phosphate ABC transporter substrate-binding protein PstS 0.62 ABID97_RS04905 ribulose-phosphate 3-epimerase
Herbaspirillum seropedicae SmR1 0.53 HSERO_RS06310 phosphate ABC transporter substrate-binding protein 0.74 HSERO_RS19425 ribulose-phosphate 3-epimerase
Castellaniella sp019104865 MT123 0.52 ABCV34_RS15585 phosphate ABC transporter substrate-binding protein PstS 0.64 ABCV34_RS10270 ribulose-phosphate 3-epimerase
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.3359.1 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) 0.67 Xcc-8004.605.1 Ribulose-phosphate 3-epimerase (EC 5.1.3.1)
Rhodopseudomonas palustris CGA009 0.51 TX73_024845 phosphate ABC transporter substrate-binding protein PstS 0.40 TX73_019755 ribulose-phosphate 3-epimerase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF62 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) 0.64 GFF2197 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) low > 90
Azospirillum sp. SherDot2 0.48 MPMX19_06032 Phosphate-binding protein PstS 0.60 MPMX19_02946 Ribulose-phosphate 3-epimerase low > 112
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_3106 phosphate ABC transporter substrate-binding protein, PhoT family 0.77 Psyr_4611 ribulose-5-phosphate 3-epimerase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_3106 phosphate ABC transporter substrate-binding protein, PhoT family 0.77 Psyr_4611 ribulose-5-phosphate 3-epimerase
Rhizobium sp. OAE497 0.44 ABIE40_RS07055 phosphate ABC transporter substrate-binding protein PstS 0.43 ABIE40_RS10105 ribulose-phosphate 3-epimerase
Acidovorax sp. GW101-3H11 0.44 Ac3H11_456 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) 0.60 Ac3H11_757 Ribulose-phosphate 3-epimerase (EC 5.1.3.1)
Lysobacter sp. OAE881 0.43 ABIE51_RS07550 phosphate ABC transporter substrate-binding protein PstS 0.71 ABIE51_RS04135 ribulose-phosphate 3-epimerase
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS08230 phosphate ABC transporter substrate-binding protein PstS 0.80 ABZR86_RS12200 ribulose-phosphate 3-epimerase
Rhodanobacter denitrificans FW104-10B01 0.40 LRK54_RS00455 phosphate ABC transporter substrate-binding protein PstS 0.71 LRK54_RS11390 ribulose-phosphate 3-epimerase
Rhodanobacter denitrificans MT42 0.40 LRK55_RS00195 phosphate ABC transporter substrate-binding protein PstS 0.71 LRK55_RS11120 ribulose-phosphate 3-epimerase
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_06855 pstS phosphate ABC transporter substrate-binding protein PstS 0.70 OKGIIK_12435 rpe ribulose-phosphate 3-epimerase
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS16170 phosphate ABC transporter substrate-binding protein PstS 0.77 PFLU_RS27390 ribulose-phosphate 3-epimerase
Pseudomonas fluorescens SBW25 0.35 PFLU_RS16170 phosphate ABC transporter substrate-binding protein PstS 0.77 PFLU_RS27390 ribulose-phosphate 3-epimerase
Pseudomonas simiae WCS417 0.34 PS417_14270 phosphate ABC transporter substrate-binding protein 0.78 PS417_25735 ribulose-phosphate 3-epimerase
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_26700 phosphate ABC transporter substrate-binding protein 0.76 AO356_14410 ribulose phosphate epimerase
Pseudomonas putida KT2440 0.32 PP_2656 phosphate ABC transporter 0.77 PP_0415 ribulose-5-phosphate 3-epimerase
Bacteroides thetaiotaomicron VPI-5482 0.26 BT0009 phosphate-binding periplasmic protein precursor, putative ABC transporter (NCBI ptt file) 0.38 BT3946 ribulose-phosphate 3-epimerase (NCBI ptt file)
Mycobacterium tuberculosis H37Rv 0.20 Rv0934 Periplasmic phosphate-binding lipoprotein PstS1 (PBP-1) (PstS1) 0.39 Rv1408 Probable ribulose-phosphate 3-epimerase Rpe (PPE) (R5P3E) (pentose-5-phosphate 3-epimerase)
Pseudomonas sp. RS175 0.08 PFR28_01753 Alkaline phosphatase L 0.76 PFR28_04049 Ribulose-phosphate 3-epimerase

Not shown: 0 genomes with orthologs for b3728 only; 43 genomes with orthologs for b3386 only