| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BW25113 | 1.0 | b2892 | recJ | ssDNA exonuclease, 5' --> 3'-specific (NCBI) | 1.0 | b2822 | recC | exonuclease V (RecBCD complex), gamma chain (NCBI) | 0.47 | 8 |
| Escherichia coli ECRC99 | 0.99 | KEDOAH_08560 | recJ | single-stranded-DNA-specific exonuclease RecJ | 1.00 | KEDOAH_08090 | recC | exodeoxyribonuclease V subunit gamma | — | — |
| Escherichia coli ECRC98 | 0.99 | JDDGAC_23220 | recJ | single-stranded-DNA-specific exonuclease RecJ | 1.00 | JDDGAC_23705 | recC | exodeoxyribonuclease V subunit gamma | — | — |
| Escherichia coli ECRC102 | 0.99 | NIAGMN_17345 | recJ | single-stranded-DNA-specific exonuclease RecJ | 1.00 | NIAGMN_17810 | recC | exodeoxyribonuclease V subunit gamma | — | — |
| Escherichia coli ECRC101 | 0.99 | MCAODC_10100 | recJ | single-stranded-DNA-specific exonuclease RecJ | 1.00 | MCAODC_10565 | recC | exodeoxyribonuclease V subunit gamma | — | — |
| Escherichia coli ECRC101 | 0.99 | OKFHMN_19580 | recJ | single-stranded-DNA-specific exonuclease RecJ | 1.00 | OKFHMN_20040 | recC | exodeoxyribonuclease V subunit gamma | — | — |
| Escherichia fergusonii Becca | 0.99 | EFB2_01009 | | Single-stranded-DNA-specific exonuclease RecJ | 0.99 | EFB2_01062 | | RecBCD enzyme subunit RecC | 0.47 | 67 |
| Escherichia coli ECOR27 | 0.99 | NOLOHH_11505 | recJ | single-stranded-DNA-specific exonuclease RecJ | 1.00 | NOLOHH_11925 | recC | exodeoxyribonuclease V subunit gamma | — | — |
| Escherichia coli BL21 | 0.99 | ECD_02724 | | ssDNA exonuclease, 5 | 1.00 | ECD_02670 | | exonuclease V (RecBCD complex), gamma chain | low | > 60 |
| Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS16115 | | single-stranded-DNA-specific exonuclease RecJ | 1.00 | ECOLIN_RS15840 | | exodeoxyribonuclease V subunit gamma | low | > 52 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.99 | OHPLBJKB_00823 | | Single-stranded-DNA-specific exonuclease RecJ | 1.00 | OHPLBJKB_00908 | | RecBCD enzyme subunit RecC | low | > 73 |
| Escherichia coli ECRC62 | 0.99 | BNILDI_10035 | recJ | single-stranded-DNA-specific exonuclease RecJ | 1.00 | BNILDI_10405 | recC | exodeoxyribonuclease V subunit gamma | — | — |
| Escherichia coli ECOR38 | 0.99 | HEPCGN_18870 | recJ | single-stranded-DNA-specific exonuclease RecJ | 1.00 | HEPCGN_19295 | recC | exodeoxyribonuclease V subunit gamma | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.93 | GFF2989 | | Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) | 0.90 | GFF1303 | | Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) | 0.61 | 15 |
| Enterobacter asburiae PDN3 | 0.90 | EX28DRAFT_2943 | | single-stranded-DNA-specific exonuclease RecJ | 0.79 | EX28DRAFT_2897 | | DNA helicase/exodeoxyribonuclease V, gamma subunit (EC 3.1.11.5) | — | — |
| Klebsiella michiganensis M5al | 0.89 | BWI76_RS23805 | | ssDNA exonuclease RecJ | 0.80 | BWI76_RS23240 | | exonuclease V subunit gamma | low | > 92 |
| Enterobacter sp. TBS_079 | 0.89 | MPMX20_03751 | | Single-stranded-DNA-specific exonuclease RecJ | 0.78 | MPMX20_03685 | | RecBCD enzyme subunit RecC | low | > 85 |
| Serratia liquefaciens MT49 | 0.79 | IAI46_20720 | | single-stranded-DNA-specific exonuclease RecJ | 0.63 | IAI46_20415 | | exodeoxyribonuclease V subunit gamma | — | — |
| Pantoea sp. MT58 | 0.77 | IAI47_03830 | | single-stranded-DNA-specific exonuclease RecJ | 0.63 | IAI47_03955 | | exodeoxyribonuclease V subunit gamma | — | — |
| Dickeya dianthicola 67-19 | 0.77 | HGI48_RS03450 | | single-stranded-DNA-specific exonuclease RecJ | 0.26 | HGI48_RS11105 | | exodeoxyribonuclease V subunit gamma | — | — |
| Dickeya dianthicola ME23 | 0.77 | DZA65_RS03495 | | single-stranded-DNA-specific exonuclease RecJ | 0.25 | DZA65_RS11485 | | exodeoxyribonuclease V subunit gamma | — | — |
| Dickeya dadantii 3937 | 0.76 | DDA3937_RS03310 | | single-stranded-DNA-specific exonuclease RecJ | 0.25 | DDA3937_RS11085 | | exodeoxyribonuclease V subunit gamma | — | — |
| Rahnella sp. WP5 | 0.76 | EX31_RS13470 | | single-stranded-DNA-specific exonuclease RecJ | 0.26 | EX31_RS20740 | | exodeoxyribonuclease V subunit gamma | — | — |
| Erwinia tracheiphila SCR3 | 0.72 | LU632_RS05985 | recJ | single-stranded-DNA-specific exonuclease RecJ | 0.63 | LU632_RS06180 | recC | exodeoxyribonuclease V subunit gamma | — | — |
| Pectobacterium carotovorum WPP14 | 0.72 | HER17_RS17880 | | single-stranded-DNA-specific exonuclease RecJ | 0.61 | HER17_RS16535 | | exodeoxyribonuclease V subunit gamma | low | > 75 |
| Vibrio cholerae E7946 ATCC 55056 | 0.64 | CSW01_12240 | | single-stranded-DNA-specific exonuclease RecJ | 0.40 | CSW01_11785 | | exonuclease V subunit gamma | 0.52 | 61 |
| Shewanella sp. ANA-3 | 0.58 | Shewana3_3329 | | single-stranded-DNA-specific exonuclease RecJ (RefSeq) | 0.28 | Shewana3_2245 | | exodeoxyribonuclease V, gamma subunit (RefSeq) | — | — |
| Shewanella loihica PV-4 | 0.57 | Shew_0772 | | single-stranded-DNA-specific exonuclease RecJ (RefSeq) | 0.28 | Shew_2129 | | exodeoxyribonuclease V, gamma subunit (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.57 | SO0952 | recJ | single-stranded-DNA-specific exonuclease RecJ (NCBI ptt file) | 0.28 | SO2149 | recC | exodeoxyribonuclease V, gamma subunit (NCBI ptt file) | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.57 | Psyr_1298 | | exonuclease RecJ | 0.28 | Psyr_0680 | | DNA helicase/exodeoxyribonuclease V, gamma subunit | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.57 | Psyr_1298 | | exonuclease RecJ | 0.28 | Psyr_0680 | | DNA helicase/exodeoxyribonuclease V, gamma subunit | low | > 86 |
| Pseudomonas simiae WCS417 | 0.57 | PS417_22855 | | ssDNA exonuclease RecJ | 0.28 | PS417_23780 | | exodeoxyribonuclease V subunit gamma | — | — |
| Shewanella amazonensis SB2B | 0.57 | Sama_2737 | | single-stranded-DNA-specific exonuclease RecJ (RefSeq) | 0.29 | Sama_1900 | | exodeoxyribonuclease V, gamma subunit (RefSeq) | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.56 | PFLU_RS24515 | | single-stranded-DNA-specific exonuclease RecJ | 0.29 | PFLU_RS25595 | | exodeoxyribonuclease V subunit gamma | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.56 | PFLU_RS24515 | | single-stranded-DNA-specific exonuclease RecJ | 0.29 | PFLU_RS25595 | | exodeoxyribonuclease V subunit gamma | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.56 | AO356_06345 | | single-stranded-DNA-specific exonuclease RecJ | 0.29 | AO356_07920 | | exodeoxyribonuclease V subunit gamma | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.56 | Pf6N2E2_3137 | | Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) | 0.29 | Pf6N2E2_3461 | | Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) | low | > 103 |
| Pseudomonas sp. S08-1 | 0.56 | OH686_06955 | | single-stranded-DNA-specific exonuclease RecJ | 0.25 | OH686_12080 | | exodeoxyribonuclease V, gamma subunit | low | > 80 |
| Pseudomonas fluorescens FW300-N1B4 | 0.56 | Pf1N1B4_3020 | | Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) | 0.29 | Pf1N1B4_1236 | | Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) | low | > 87 |
| Pseudomonas putida KT2440 | 0.55 | PP_1477 | | ssDNA-specific exonuclease RecJ | 0.30 | PP_4674 | | ATP-dependent DNA helicase and dsDNA/ssDNA exonuclease, ssDNA endonuclease, recombinase subunit | — | — |
| Pseudomonas sp. RS175 | 0.55 | PFR28_00339 | | Single-stranded-DNA-specific exonuclease RecJ | 0.30 | PFR28_00006 | | RecBCD enzyme subunit RecC | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.55 | PfGW456L13_1730 | | Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) | 0.28 | PfGW456L13_5152 | | Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.55 | AO353_04320 | | single-stranded-DNA-specific exonuclease RecJ | 0.29 | AO353_06050 | | exodeoxyribonuclease V subunit gamma | low | > 101 |
| Pseudomonas stutzeri RCH2 | 0.53 | Psest_1544 | | single-stranded-DNA-specific exonuclease RecJ | 0.26 | Psest_0212 | | exodeoxyribonuclease V, gamma subunit | low | > 67 |
| Marinobacter adhaerens HP15 | 0.50 | HP15_766 | | bacterial RecJ exonuclease | 0.25 | HP15_3714 | | exodeoxyribonuclease V, gamma subunit | low | > 73 |
| Dyella japonica UNC79MFTsu3.2 | 0.44 | ABZR86_RS02800 | | single-stranded-DNA-specific exonuclease RecJ | 0.27 | ABZR86_RS07660 | | exodeoxyribonuclease V subunit gamma | low | > 74 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.43 | Xcc-8004.2909.1 | | Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) | 0.18 | Xcc-8004.5354.1 | | Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) | — | — |
| Acinetobacter radioresistens SK82 | 0.42 | MPMX26_02917 | | Single-stranded-DNA-specific exonuclease RecJ | 0.09 | MPMX26_00271 | | RecBCD enzyme subunit RecC | low | > 36 |
| Rhodanobacter sp. FW510-T8 | 0.41 | OKGIIK_06995 | recJ | single-stranded-DNA-specific exonuclease RecJ | 0.17 | OKGIIK_09225 | | RecBCD enzyme subunit RecC | low | > 52 |
| Rhodanobacter denitrificans FW104-10B01 | 0.41 | LRK54_RS00315 | | single-stranded-DNA-specific exonuclease RecJ | 0.19 | LRK54_RS02175 | | exodeoxyribonuclease V subunit gamma | low | > 59 |
| Paraburkholderia sabiae LMG 24235 | 0.41 | QEN71_RS05835 | | single-stranded-DNA-specific exonuclease RecJ | 0.18 | QEN71_RS23195 | | exodeoxyribonuclease V subunit gamma | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.40 | H281DRAFT_00488 | | exonuclease RecJ | 0.17 | H281DRAFT_05085 | | DNA helicase/exodeoxyribonuclease V, gamma subunit | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.40 | BPHYT_RS12730 | | single-stranded DNA exonuclease | 0.18 | BPHYT_RS07970 | | exodeoxyribonuclease V subunit gamma | — | — |
| Paraburkholderia graminis OAS925 | 0.39 | ABIE53_002771 | | single-stranded-DNA-specific exonuclease | 0.26 | ABIE53_000494 | | exodeoxyribonuclease V gamma subunit | low | > 113 |
| Castellaniella sp019104865 MT123 | 0.38 | ABCV34_RS05005 | | single-stranded-DNA-specific exonuclease RecJ | 0.25 | ABCV34_RS02960 | | exodeoxyribonuclease V subunit gamma | low | > 48 |
| Rhodanobacter denitrificans MT42 | 0.17 | LRK55_RS18310 | | DHHA1 domain-containing protein | 0.19 | LRK55_RS01925 | | exodeoxyribonuclease V subunit gamma | low | > 63 |
Not shown: 37 genomes with orthologs for b2892 only; 2 genomes with orthologs for b2822 only