| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BW25113 | 1.0 | b3822 | recQ | ATP-dependent DNA helicase (NCBI) | 1.0 | b2820 | recB | exonuclease V (RecBCD complex), beta subunit (NCBI) | 0.21 | 17 |
| Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS21935 | | ATP-dependent DNA helicase RecQ | 0.99 | ECOLIN_RS15830 | | exodeoxyribonuclease V subunit beta | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_04229 | | ATP-dependent DNA helicase RecQ | 1.00 | OHPLBJKB_00910 | | RecBCD enzyme subunit RecB | — | — |
| Escherichia fergusonii Becca | 1.00 | EFB2_04815 | | ATP-dependent DNA helicase RecQ | 0.98 | EFB2_01064 | | RecBCD enzyme subunit RecB | 0.51 | 51 |
| Escherichia coli ECRC62 | 1.00 | BNILDI_05040 | recQ | ATP-dependent DNA helicase RecQ | 1.00 | BNILDI_10415 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_13790 | recQ | ATP-dependent DNA helicase RecQ | 0.98 | KEDOAH_08080 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Escherichia coli ECRC98 | 1.00 | JDDGAC_17985 | recQ | ATP-dependent DNA helicase RecQ | 0.98 | JDDGAC_23715 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_12115 | recQ | ATP-dependent DNA helicase RecQ | 0.98 | NIAGMN_17820 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Escherichia coli ECOR38 | 1.00 | HEPCGN_13060 | recQ | ATP-dependent DNA helicase RecQ | 0.99 | HEPCGN_19305 | recB | exodeoxyribonuclease V subunit beta | low | > 85 |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_06490 | recQ | ATP-dependent DNA helicase RecQ | 0.99 | NOLOHH_11935 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Escherichia coli ECRC101 | 1.00 | OKFHMN_14360 | recQ | ATP-dependent DNA helicase RecQ | 0.98 | OKFHMN_20050 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Escherichia coli ECRC101 | 1.00 | MCAODC_04865 | recQ | ATP-dependent DNA helicase RecQ | 0.98 | MCAODC_10575 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Escherichia coli BL21 | 1.00 | ECD_03701 | | ATP-dependent DNA helicase | 1.00 | ECD_02668 | | exonuclease V (RecBCD complex), beta subunit | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.95 | GFF248 | | ATP-dependent DNA helicase RecQ | 0.83 | GFF1301 | | Exodeoxyribonuclease V beta chain (EC 3.1.11.5) | — | — |
| Enterobacter sp. TBS_079 | 0.93 | MPMX20_04458 | | ATP-dependent DNA helicase RecQ | 0.77 | MPMX20_03683 | | RecBCD enzyme subunit RecB | low | > 85 |
| Enterobacter asburiae PDN3 | 0.92 | EX28DRAFT_4487 | | ATP-dependent DNA helicase RecQ | 0.77 | EX28DRAFT_2895 | | DNA helicase/exodeoxyribonuclease V, beta subunit (EC 3.1.11.5) | — | — |
| Klebsiella michiganensis M5al | 0.92 | BWI76_RS01245 | | DNA helicase RecQ | 0.74 | BWI76_RS23230 | | exodeoxyribonuclease V subunit beta | low | > 92 |
| Pectobacterium carotovorum WPP14 | 0.82 | HER17_RS01395 | | ATP-dependent DNA helicase RecQ | 0.61 | HER17_RS16525 | | exodeoxyribonuclease V subunit beta | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.82 | LU632_RS24095 | recQ | ATP-dependent DNA helicase RecQ | 0.60 | LU632_RS06190 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Pantoea sp. MT58 | 0.82 | IAI47_18360 | | ATP-dependent DNA helicase RecQ | 0.58 | IAI47_03965 | | exodeoxyribonuclease V subunit beta | — | — |
| Rahnella sp. WP5 | 0.81 | EX31_RS15210 | | ATP-dependent DNA helicase RecQ | 0.31 | EX31_RS20735 | | exodeoxyribonuclease V subunit beta | low | > 89 |
| Serratia liquefaciens MT49 | 0.81 | IAI46_00770 | | ATP-dependent DNA helicase RecQ | 0.63 | IAI46_20405 | | exodeoxyribonuclease V subunit beta | — | — |
| Dickeya dianthicola ME23 | 0.80 | DZA65_RS21045 | | ATP-dependent DNA helicase RecQ | 0.32 | DZA65_RS11480 | | exodeoxyribonuclease V subunit beta | — | — |
| Dickeya dianthicola 67-19 | 0.80 | HGI48_RS20005 | | ATP-dependent DNA helicase RecQ | 0.32 | HGI48_RS11100 | | exodeoxyribonuclease V subunit beta | — | — |
| Dickeya dadantii 3937 | 0.80 | DDA3937_RS19850 | | ATP-dependent DNA helicase RecQ | 0.32 | DDA3937_RS11080 | | exodeoxyribonuclease V subunit beta | low | > 74 |
| Vibrio cholerae E7946 ATCC 55056 | 0.67 | CSW01_01045 | | DNA helicase RecQ | 0.41 | CSW01_11780 | | exodeoxyribonuclease V subunit beta | low | > 62 |
| Shewanella oneidensis MR-1 | 0.58 | SO4241 | recQ | ATP-dependent DNA helicase RecQ (NCBI ptt file) | 0.30 | SO2148 | recB | exodeoxyribonuclease V, beta subunit (NCBI ptt file) | — | — |
| Shewanella sp. ANA-3 | 0.58 | Shewana3_3763 | | ATP-dependent DNA helicase RecQ (RefSeq) | 0.30 | Shewana3_2246 | | exodeoxyribonuclease V, beta subunit (RefSeq) | — | — |
| Shewanella amazonensis SB2B | 0.58 | Sama_0333 | | ATP-dependent DNA helicase RecQ (RefSeq) | 0.29 | Sama_1901 | | exodeoxyribonuclease V, beta subunit (RefSeq) | — | — |
| Shewanella loihica PV-4 | 0.57 | Shew_3474 | | ATP-dependent DNA helicase RecQ (RefSeq) | 0.31 | Shew_2130 | | exodeoxyribonuclease V, beta subunit (RefSeq) | — | — |
| Alteromonas macleodii MIT1002 | 0.53 | MIT1002_00148 | | ATP-dependent DNA helicase RecQ | 0.22 | MIT1002_02360 | | Exodeoxyribonuclease V beta chain | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.45 | PfGW456L13_4423 | | ATP-dependent DNA helicase RecQ | 0.32 | PfGW456L13_5151 | | Exodeoxyribonuclease V beta chain (EC 3.1.11.5) | low | > 87 |
| Pseudomonas putida KT2440 | 0.45 | PP_4516 | | ATP-dependent DNA 3 | 0.30 | PP_4673 | | Chi activated ATP-dependent DNA helicase and dsDNA/ssDNA exonuclease | — | — |
| Pseudomonas sp. RS175 | 0.45 | PFR28_00788 | | ATP-dependent DNA helicase RecQ | 0.32 | PFR28_00007 | | RecBCD enzyme subunit RecB | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.45 | AO356_04050 | | ATP-dependent DNA helicase RecQ | 0.32 | AO356_07915 | | exodeoxyribonuclease V subunit beta | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.45 | Pf6N2E2_2645 | | ATP-dependent DNA helicase RecQ | 0.32 | Pf6N2E2_3460 | | Exodeoxyribonuclease V beta chain (EC 3.1.11.5) | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.45 | Pf1N1B4_3533 | | ATP-dependent DNA helicase RecQ | 0.33 | Pf1N1B4_1235 | | Exodeoxyribonuclease V beta chain (EC 3.1.11.5) | low | > 87 |
| Pseudomonas fluorescens SBW25-INTG | 0.45 | PFLU_RS21920 | | DNA helicase RecQ | 0.32 | PFLU_RS25590 | | exodeoxyribonuclease V subunit beta | — | — |
| Pseudomonas fluorescens SBW25 | 0.45 | PFLU_RS21920 | | DNA helicase RecQ | 0.32 | PFLU_RS25590 | | exodeoxyribonuclease V subunit beta | low | > 109 |
| Pseudomonas simiae WCS417 | 0.45 | PS417_19950 | | ATP-dependent DNA helicase RecQ | 0.31 | PS417_23775 | | exodeoxyribonuclease V subunit beta | low | > 88 |
| Rhodanobacter denitrificans FW104-10B01 | 0.44 | LRK54_RS13000 | | DNA helicase RecQ | 0.11 | LRK54_RS02180 | | UvrD-helicase domain-containing protein | low | > 59 |
| Pseudomonas fluorescens FW300-N2E3 | 0.44 | AO353_18430 | | ATP-dependent DNA helicase RecQ | 0.33 | AO353_06045 | | exodeoxyribonuclease V subunit beta | low | > 101 |
| Pseudomonas stutzeri RCH2 | 0.44 | Psest_1869 | | ATP-dependent DNA helicase RecQ | 0.24 | Psest_0213 | | exodeoxyribonuclease V, beta subunit | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.44 | Psyr_3738 | | ATP-dependent DNA helicase RecQ | 0.31 | Psyr_0681 | | DNA helicase/exodeoxyribonuclease V, beta subunit | — | — |
| Rhodanobacter denitrificans MT42 | 0.44 | LRK55_RS12700 | | DNA helicase RecQ | 0.14 | LRK55_RS01930 | | UvrD-helicase domain-containing protein | low | > 63 |
| Dyella japonica UNC79MFTsu3.2 | 0.44 | ABZR86_RS19925 | | DNA helicase RecQ | 0.27 | ABZR86_RS07665 | | exodeoxyribonuclease V subunit beta | low | > 74 |
| Pseudomonas syringae pv. syringae B728a | 0.44 | Psyr_3738 | | ATP-dependent DNA helicase RecQ | 0.31 | Psyr_0681 | | DNA helicase/exodeoxyribonuclease V, beta subunit | — | — |
| Marinobacter adhaerens HP15 | 0.44 | HP15_1718 | | ATP-dependent DNA helicase RecQ | 0.29 | HP15_3713 | | exodeoxyribonuclease V, beta subunit | — | — |
| Rhodanobacter sp. FW510-T8 | 0.44 | OKGIIK_02375 | recQ | DNA helicase RecQ | 0.12 | OKGIIK_09230 | | RecBCD enzyme subunit RecB | low | > 52 |
| Pseudomonas sp. S08-1 | 0.43 | OH686_20670 | | ATP-dependent DNA helicase RecQ | 0.21 | OH686_12075 | | Exodeoxyribonuclease V beta chain | low | > 80 |
| Burkholderia phytofirmans PsJN | 0.42 | BPHYT_RS18145 | | ATP-dependent DNA helicase RecQ | 0.21 | BPHYT_RS07975 | | exodeoxyribonuclease V subunit beta | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.42 | QEN71_RS28295 | | DNA helicase RecQ | 0.20 | QEN71_RS23190 | | exodeoxyribonuclease V subunit beta | low | > 153 |
| Paraburkholderia graminis OAS925 | 0.42 | ABIE53_003792 | | ATP-dependent DNA helicase RecQ | 0.29 | ABIE53_000495 | | exodeoxyribonuclease V beta subunit | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.41 | H281DRAFT_06595 | | ATP-dependent DNA helicase RecQ | 0.21 | H281DRAFT_05086 | | DNA helicase/exodeoxyribonuclease V, beta subunit | — | — |
| Lysobacter sp. OAE881 | 0.41 | ABIE51_RS05145 | | DNA helicase RecQ | 0.19 | ABIE51_RS01025 | | exodeoxyribonuclease V subunit beta | low | > 62 |
| Castellaniella sp019104865 MT123 | 0.41 | ABCV34_RS07985 | | DNA helicase RecQ | 0.25 | ABCV34_RS02965 | | exodeoxyribonuclease V subunit beta | low | > 48 |
Not shown: 40 genomes with orthologs for b3822 only; 1 genomes with orthologs for b2820 only