| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BW25113 | 1.0 | b2765 | ygcM | 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) (NCBI) | 1.0 | b0082 | mraW | S-adenosyl-methyltransferase (NCBI) | 0.17 | 17 |
| Escherichia coli ECRC101 | 1.00 | MCAODC_10890 | queD | 6-carboxytetrahydropterin synthase QueD | 1.00 | MCAODC_01190 | rsmH | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | — | — |
| Escherichia coli ECRC101 | 1.00 | OKFHMN_20365 | queD | 6-carboxytetrahydropterin synthase QueD | 1.00 | OKFHMN_10675 | rsmH | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | — | — |
| Escherichia coli ECRC98 | 1.00 | JDDGAC_24030 | queD | 6-carboxytetrahydropterin synthase QueD | 1.00 | JDDGAC_14270 | rsmH | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | — | — |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_18135 | queD | 6-carboxytetrahydropterin synthase QueD | 1.00 | NIAGMN_08525 | rsmH | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | — | — |
| Escherichia coli ECRC62 | 1.00 | BNILDI_10730 | queD | 6-carboxytetrahydropterin synthase QueD | 1.00 | BNILDI_08590 | rsmH | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | — | — |
| Escherichia coli BL21 | 1.00 | ECD_02610 | | 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) | 1.00 | ECD_00083 | | 16S rRNA m(4)C1402 methyltransferase, SAM-dependent | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_00968 | | 6-carboxy-5,6,7,8-tetrahydropterin synthase | 1.00 | OHPLBJKB_03577 | | Ribosomal RNA small subunit methyltransferase H | — | — |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_07760 | queD | 6-carboxytetrahydropterin synthase QueD | 1.00 | KEDOAH_17480 | rsmH | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | — | — |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_12180 | queD | 6-carboxytetrahydropterin synthase QueD | 1.00 | NOLOHH_03020 | rsmH | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | — | — |
| Escherichia fergusonii Becca | 1.00 | EFB2_01152 | | 6-carboxy-5,6,7,8-tetrahydropterin synthase | 1.00 | EFB2_03965 | | Ribosomal RNA small subunit methyltransferase H | low | > 86 |
| Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS15415 | | 6-carboxytetrahydropterin synthase QueD | 0.99 | ECOLIN_RS00440 | | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | — | — |
| Escherichia coli ECOR38 | 0.99 | HEPCGN_19100 | queD | 6-carboxytetrahydropterin synthase QueD | 1.00 | HEPCGN_08655 | rsmH | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | — | — |
| Enterobacter asburiae PDN3 | 0.96 | EX28DRAFT_2854 | | queuosine biosynthesis protein QueD | 0.94 | EX28DRAFT_3677 | | 16S rRNA (cytosine(1402)-N(4))-methyltransferase | — | — |
| Enterobacter sp. TBS_079 | 0.94 | MPMX20_03644 | | 6-carboxy-5,6,7,8-tetrahydropterin synthase | 0.94 | MPMX20_00775 | | Ribosomal RNA small subunit methyltransferase H | low | > 85 |
| Klebsiella michiganensis M5al | 0.94 | BWI76_RS22775 | | 6-carboxytetrahydropterin synthase QueD | 0.95 | BWI76_RS04720 | | 16S rRNA (cytosine(1402)-N(4))-methyltransferase | — | — |
| Dickeya dadantii 3937 | 0.91 | DDA3937_RS16965 | | 6-carboxytetrahydropterin synthase QueD | 0.82 | DDA3937_RS18080 | | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | low | > 74 |
| Dickeya dianthicola ME23 | 0.91 | DZA65_RS18105 | | 6-carboxytetrahydropterin synthase QueD | 0.81 | DZA65_RS19160 | | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | low | > 75 |
| Dickeya dianthicola 67-19 | 0.90 | HGI48_RS17030 | | 6-carboxytetrahydropterin synthase QueD | 0.81 | HGI48_RS18015 | | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.88 | HER17_RS04205 | | 6-carboxytetrahydropterin synthase QueD | 0.82 | HER17_RS03120 | | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | — | — |
| Pantoea sp. MT58 | 0.88 | IAI47_04145 | | 6-carboxytetrahydropterin synthase QueD | 0.86 | IAI47_15970 | | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | low | > 76 |
| Serratia liquefaciens MT49 | 0.87 | IAI46_03680 | | 6-carboxytetrahydropterin synthase QueD | 0.83 | IAI46_03400 | | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | — | — |
| Erwinia tracheiphila SCR3 | 0.87 | LU632_RS06395 | queD | 6-carboxytetrahydropterin synthase QueD | 0.84 | LU632_RS02910 | rsmH | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | low | > 74 |
| Vibrio cholerae E7946 ATCC 55056 | 0.84 | CSW01_06560 | | 6-carboxytetrahydropterin synthase QueD | 0.66 | CSW01_12200 | | ribosomal RNA small subunit methyltransferase H | low | > 62 |
| Rahnella sp. WP5 | 0.84 | EX31_RS07915 | | 6-carboxytetrahydropterin synthase QueD | 0.82 | EX31_RS03645 | | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | low | > 89 |
| Pseudomonas fluorescens SBW25 | 0.79 | PFLU_RS10415 | | 6-carboxytetrahydropterin synthase QueD | 0.53 | PFLU_RS04665 | | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.79 | PFLU_RS10415 | | 6-carboxytetrahydropterin synthase QueD | 0.53 | PFLU_RS04665 | | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | — | — |
| Pseudomonas simiae WCS417 | 0.79 | PS417_09830 | | 6-carboxy-5,6,7,8-tetrahydropterin synthase | 0.53 | PS417_04600 | | 16S rRNA methyltransferase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.79 | Pf1N1B4_110 | | Queuosine biosynthesis QueD, PTPS-I | 0.53 | Pf1N1B4_951 | | rRNA small subunit methyltransferase H | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.78 | AO356_21260 | | 6-carboxy-5,6,7,8-tetrahydropterin synthase | 0.53 | AO356_17120 | | ribosomal RNA small subunit methyltransferase H | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.78 | AO353_19760 | | 6-carboxy-5,6,7,8-tetrahydropterin synthase | 0.54 | AO353_15300 | | ribosomal RNA small subunit methyltransferase H | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.78 | Pf6N2E2_37 | | 6-carboxytetrahydropterin synthase (EC 4.1.2.50) @ Queuosine biosynthesis QueD, PTPS-I | 0.43 | Pf6N2E2_5348 | | rRNA small subunit methyltransferase H | — | — |
| Pseudomonas sp. RS175 | 0.78 | PFR28_02851 | | 6-carboxy-5,6,7,8-tetrahydropterin synthase | 0.54 | PFR28_03595 | | Ribosomal RNA small subunit methyltransferase H | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.77 | Psyr_3215 | | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein | 0.53 | Psyr_4110 | | methyltransferase | — | — |
| Pseudomonas putida KT2440 | 0.77 | PP_2341 | | 6-carboxy-5,6,7,8-tetrahydropterin synthase | 0.53 | PP_1329 | | Ribosomal RNA small subunit methyltransferase H | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.77 | Psyr_3215 | | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein | 0.53 | Psyr_4110 | | methyltransferase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.76 | PfGW456L13_2447 | | 6-carboxytetrahydropterin synthase (EC 4.1.2.50) @ Queuosine biosynthesis QueD, PTPS-I | 0.53 | PfGW456L13_1645 | | rRNA small subunit methyltransferase H | — | — |
| Lysobacter sp. OAE881 | 0.75 | ABIE51_RS17950 | | 6-carboxytetrahydropterin synthase QueD | 0.47 | ABIE51_RS04710 | | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | low | > 62 |
| Pseudomonas stutzeri RCH2 | 0.74 | Psest_2010 | | queuosine biosynthesis protein QueD | 0.54 | Psest_3267 | | S-adenosyl-methyltransferase MraW | — | — |
| Pseudomonas sp. S08-1 | 0.70 | OH686_00030 | | queuosine biosynthesis protein QueD | 0.54 | OH686_08330 | | 16S rRNA (cytosine(1402)-N(4))-methyltransferase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.69 | Xcc-8004.4528.1 | | hypothetical protein | 0.47 | Xcc-8004.4363.1 | | rRNA small subunit methyltransferase H | — | — |
| Rhodanobacter denitrificans MT42 | 0.69 | LRK55_RS09085 | | 6-carboxytetrahydropterin synthase QueD | 0.46 | LRK55_RS11940 | | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.62 | ABZR86_RS13650 | | 6-carboxytetrahydropterin synthase QueD | 0.47 | ABZR86_RS11365 | | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | — | — |
| Rhodanobacter sp. FW510-T8 | 0.61 | OKGIIK_15925 | queD | 6-carboxytetrahydropterin synthase QueD | 0.45 | OKGIIK_11720 | rsmH | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.61 | LRK54_RS09655 | | 6-carboxytetrahydropterin synthase QueD | 0.45 | LRK54_RS12205 | | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.57 | DvMF_1123 | | queuosine biosynthesis protein QueD (RefSeq) | 0.34 | DvMF_0963 | | S-adenosyl-methyltransferase MraW (RefSeq) | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.56 | DVU2657 | | 6-pyruvoyl tetrahydrobiopterin synthase, putative (TIGR) | 0.33 | DVU2512 | mraW | S-adenosyl-methyltransferase MraW (TIGR) | low | > 55 |
| Rhodopseudomonas palustris CGA009 | 0.51 | TX73_008525 | | 6-carboxytetrahydropterin synthase QueD | 0.40 | TX73_018335 | | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | low | > 86 |
| Agrobacterium fabrum C58 | 0.35 | Atu3345 | | 6-pyruvoyl tetrahydrobiopterin synthase | 0.35 | Atu2102 | | S-adenosyl methionine-dependent methytransferase | — | — |
| Sinorhizobium meliloti 1021 | 0.33 | SM_b20939 | | 6-pyruvoyl-tetrahydropterin synthase | 0.35 | SMc01858 | | S-adenosyl-methyltransferase MraW | low | > 103 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.30 | A4249_RS08690 | | 6-carboxytetrahydropterin synthase | 0.38 | A4249_RS01485 | | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | — | — |
| Variovorax sp. SCN45 | 0.30 | GFF2576 | | 6-carboxy-5,6,7,8-tetrahydropterin synthase (EC 4.1.2.50) | 0.50 | GFF4481 | | 16S rRNA (cytosine(1402)-N(4))-methyltransferase (EC 2.1.1.199) | — | — |
| Caulobacter crescentus NA1000 | 0.30 | CCNA_03260 | | queuosine biosynthesis protein QueD | 0.36 | CCNA_02645 | | S-adenosyl-methyltransferase MraW | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.30 | CCNA_03260 | | queuosine biosynthesis protein QueD | 0.36 | CCNA_02645 | | S-adenosyl-methyltransferase MraW | low | > 67 |
| Variovorax sp. OAS795 | 0.29 | ABID97_RS07420 | | 6-carboxytetrahydropterin synthase | 0.48 | ABID97_RS06195 | | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | low | > 91 |
| Phaeobacter inhibens DSM 17395 | 0.27 | PGA1_c05610 | | putative queuosine biosynthesis protein QueD | 0.34 | PGA1_c09490 | | S-adenosyl-L-methionine-dependent methyltransferase MraW | — | — |
| Phocaeicola dorei CL03T12C01 | 0.24 | ABI39_RS10595 | | 6-carboxytetrahydropterin synthase QueD | 0.33 | ABI39_RS04315 | | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | — | — |
| Bacteroides stercoris CC31F | 0.23 | HMPREF1181_RS13890 | | 6-carboxytetrahydropterin synthase QueD | 0.33 | HMPREF1181_RS02780 | | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | — | — |
| Phocaeicola vulgatus CL09T03C04 | 0.23 | HMPREF1058_RS14875 | | 6-carboxytetrahydropterin synthase QueD | 0.32 | HMPREF1058_RS12430 | | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | — | — |
| Parabacteroides merdae CL09T00C40 | 0.22 | HMPREF1078_RS00755 | | 6-carboxytetrahydropterin synthase QueD | 0.34 | HMPREF1078_RS04665 | | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | — | — |
Not shown: 0 genomes with orthologs for b2765 only; 41 genomes with orthologs for b0082 only