Conservation of cofitness between Rru_A1748 and Rru_A1017 in Rhodospirillum rubrum S1H

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodospirillum rubrum S1H 1.0 Rru_A1748 ABC transporter component (NCBI) 1.0 Rru_A1017 Spermidine/putrescine ABC transporter ATP-binding subunit (NCBI) 0.65 12
Azospirillum brasilense Sp245 0.75 AZOBR_RS08250 L-proline and D-alanine ABC transporter, ATPase component 2 (from data) 0.58 AZOBR_RS08840 ABC transporter ATP-binding protein low > 97
Azospirillum sp. SherDot2 0.74 MPMX19_06005 High-affinity branched-chain amino acid transport ATP-binding protein LivF 0.56 MPMX19_04882 Spermidine/putrescine import ATP-binding protein PotA
Bosea sp. OAE506 0.73 ABIE41_RS13620 ABC transporter ATP-binding protein 0.47 ABIE41_RS21645 ABC transporter ATP-binding protein low > 77
Rhizobium sp. OAE497 0.73 ABIE40_RS14700 ABC transporter ATP-binding protein 0.50 ABIE40_RS03270 ABC transporter ATP-binding protein low > 107
Agrobacterium fabrum C58 0.71 Atu2424 ABC transporter, nucleotide binding/ATPase protein 0.52 Atu0610 ABC transporter, nucleotide binding/ATPase protein low > 89
Sinorhizobium meliloti 1021 0.71 SMc01948 high-affinity branched-chain amino acid ABC transporter ATP-binding protein 0.52 SMc00771 putrescine ABC transporter ATP-binding protein low > 103
Magnetospirillum magneticum AMB-1 0.69 AMB_RS09120 ABC transporter ATP-binding protein 0.52 AMB_RS13205 polyamine ABC transporter ATP-binding protein low > 64
Rhodopseudomonas palustris CGA009 0.66 TX73_019725 ABC transporter ATP-binding protein 0.41 TX73_021565 ABC transporter ATP-binding protein low > 86
Cupriavidus basilensis FW507-4G11 0.62 RR42_RS14405 leucine/isoleucine/valine transporter ATP-binding subunit 0.32 RR42_RS37305 sulfate ABC transporter ATP-binding protein low > 128
Castellaniella sp019104865 MT123 0.62 ABCV34_RS03635 ABC transporter ATP-binding protein 0.50 ABCV34_RS02365 polyamine ABC transporter ATP-binding protein low > 48
Pseudomonas syringae pv. syringae B728a 0.61 Psyr_0601 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family 0.52 Psyr_4863 Spermidine/putrescine ABC transporter ATP-binding subunit low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF552 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) 0.53 GFF759 Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) low > 78
Pseudomonas syringae pv. syringae B728a ΔmexB 0.61 Psyr_0601 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family 0.52 Psyr_4863 Spermidine/putrescine ABC transporter ATP-binding subunit low > 86
Enterobacter sp. TBS_079 0.61 MPMX20_04330 High-affinity branched-chain amino acid transport ATP-binding protein LivF 0.54 MPMX20_01496 Spermidine/putrescine import ATP-binding protein PotA low > 85
Pseudomonas putida KT2440 0.61 PP_4863 high-affinity branched-chain amino acid transporter, ATP-binding 0.54 PP_5179 spermidine/putrescine ABC transporter - ATP binding subunit low > 96
Klebsiella michiganensis M5al 0.61 BWI76_RS26330 ABC transporter ATP-binding protein 0.53 BWI76_RS09465 polyamine ABC transporter ATP-binding protein low > 92
Pectobacterium carotovorum WPP14 0.61 HER17_RS00515 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.54 HER17_RS12495 putrescine ABC transporter ATP-binding subunit PotG low > 75
Escherichia coli BW25113 0.61 b3454 livF ATP-binding component of leucine transport (VIMSS) 0.53 b0855 potG ATP-binding component of putrescine transport system (VIMSS) low > 76
Escherichia coli ECOR27 0.60 NOLOHH_08555 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.53 NOLOHH_22325 potG putrescine ABC transporter ATP-binding subunit PotG low > 75
Escherichia coli ECRC62 0.60 BNILDI_02950 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.53 BNILDI_20580 potG putrescine ABC transporter ATP-binding subunit PotG low > 75
Escherichia fergusonii Becca 0.60 EFB2_00368 High-affinity branched-chain amino acid transport ATP-binding protein LivF 0.52 EFB2_03206 Spermidine/putrescine import ATP-binding protein PotA low > 86
Escherichia coli ECRC102 0.60 NIAGMN_14530 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.53 NIAGMN_04000 potG putrescine ABC transporter ATP-binding subunit PotG
Escherichia coli ECRC99 0.60 KEDOAH_11380 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.53 KEDOAH_21955 potG putrescine ABC transporter ATP-binding subunit PotG
Escherichia coli BL21 0.60 ECD_03303 branched-chain amino acid ABC transporter ATPase 0.53 ECD_00860 putrescine ABC transporter ATPase low > 61
Escherichia coli Nissle 1917 0.60 ECOLIN_RS19755 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.52 ECOLIN_RS04555 putrescine ABC transporter ATP-binding subunit PotG
Escherichia coli ECRC98 0.60 JDDGAC_20390 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.53 JDDGAC_09590 potG putrescine ABC transporter ATP-binding subunit PotG low > 86
Escherichia coli ECRC100 0.60 OKFHMN_16760 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.53 OKFHMN_05955 potG putrescine ABC transporter ATP-binding subunit PotG low > 80
Escherichia coli ECRC101 0.60 MCAODC_07290 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.53 MCAODC_25170 potG putrescine ABC transporter ATP-binding subunit PotG low > 87
Escherichia coli ECOR38 0.60 HEPCGN_15580 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.52 HEPCGN_02075 potG putrescine ABC transporter ATP-binding subunit PotG low > 87
Rahnella sp. WP5 0.60 EX31_RS14785 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.53 EX31_RS09625 putrescine ABC transporter ATP-binding subunit PotG low > 89
Enterobacter asburiae PDN3 0.60 EX28DRAFT_4286 ABC-type branched-chain amino acid transport systems, ATPase component 0.54 EX28DRAFT_2098 spermidine/putrescine ABC transporter ATP-binding subunit low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_00249 High-affinity branched-chain amino acid transport ATP-binding protein LivF 0.53 OHPLBJKB_02813 Spermidine/putrescine import ATP-binding protein PotA low > 73
Pseudomonas fluorescens GW456-L13 0.60 PfGW456L13_120 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) 0.54 PfGW456L13_930 Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) low > 87
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_1378 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) 0.54 Pf1N1B4_4352 Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) low > 87
Pantoea sp. MT58 0.60 IAI47_01585 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.53 IAI47_13040 putrescine ABC transporter ATP-binding subunit PotG low > 76
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_13360 ABC transporter ATP-binding protein 0.54 AO353_08570 transporter low > 101
Serratia liquefaciens MT49 0.59 IAI46_17065 ABC transporter ATP-binding protein 0.53 IAI46_08375 putrescine ABC transporter ATP-binding subunit PotG low > 86
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_3576 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) 0.53 Pf6N2E2_4515 Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) low > 103
Dickeya dianthicola 67-19 0.59 HGI48_RS20710 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.53 HGI48_RS09485 putrescine ABC transporter ATP-binding subunit PotG low > 71
Pseudomonas simiae WCS417 0.59 PS417_02675 ABC transporter ATP-binding protein 0.54 PS417_27115 putrescine ABC transporter, ATPase component (from data) low > 88
Marinobacter adhaerens HP15 0.59 HP15_3059 high-affinity branched-chain amino acid ABC transporter, ATP-binding protein 0.52 HP15_939 spermidine/putrescine ABC transporter ATPase subunit low > 73
Dickeya dadantii 3937 0.59 DDA3937_RS00680 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.53 DDA3937_RS09465 putrescine ABC transporter ATP-binding subunit PotG low > 74
Pseudomonas fluorescens FW300-N2C3 0.59 AO356_08480 ABC transporter ATP-binding protein 0.53 AO356_13165 transporter low > 104
Pseudomonas fluorescens SBW25 0.59 PFLU_RS02745 ABC transporter ATP-binding protein 0.54 PFLU_RS28765 polyamine ABC transporter ATP-binding protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS02745 ABC transporter ATP-binding protein 0.54 PFLU_RS28765 polyamine ABC transporter ATP-binding protein low > 109
Pseudomonas sp. RS175 0.58 PFR28_05157 High-affinity branched-chain amino acid transport ATP-binding protein LivF 0.54 PFR28_04293 Spermidine/putrescine import ATP-binding protein PotA low > 88
Pseudomonas stutzeri RCH2 0.54 Psest_1308 ABC-type branched-chain amino acid transport systems, ATPase component 0.56 Psest_4282 spermidine/putrescine ABC transporter ATP-binding subunit low > 67
Desulfovibrio vulgaris Miyazaki F 0.53 DvMF_2754 ABC transporter related (RefSeq) 0.37 DvMF_1960 potA putrescine/spermidine ABC transporter ATPase protein (RefSeq) low > 51
Pseudomonas sp. S08-1 0.52 OH686_04625 Branched-chain amino acid ABC transporter, ATP-binding protein LivF 0.54 OH686_11455 Putrescine transport ATP-binding protein PotG low > 80
Desulfovibrio vulgaris Hildenborough JW710 0.51 DVU0716 livF branched-chain amino acid ABC transporter, ATP-binding protein (TIGR) 0.37 DVU0098 potA polyamine ABC transporter, ATP-binding protein (TIGR) low > 55
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS31755 amino acid ABC transporter ATPase 0.57 BPHYT_RS23145 putrescine/spermidine ABC transporter ATP-binding protein
Paraburkholderia graminis OAS925 0.49 ABIE53_005651 branched-chain amino acid transport system ATP-binding protein 0.55 ABIE53_002369 putrescine transport system ATP-binding protein low > 113
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF781 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) 0.51 GFF2034 Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) 0.50 68
Paraburkholderia bryophila 376MFSha3.1 0.48 H281DRAFT_04059 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family 0.55 H281DRAFT_05181 putrescine transport system ATP-binding protein low > 103
Acidovorax sp. GW101-3H11 0.48 Ac3H11_1692 ABC transporter for glutamine/isoleucine/leucine/phenylalanine/proline/serine/tyrosine, ATPase component 2 (from data) 0.36 Ac3H11_1610 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) low > 79
Dinoroseobacter shibae DFL-12 0.40 Dshi_1400 ABC transporter related (RefSeq) 0.35 Dshi_2120 ABC transporter related (RefSeq) low > 64

Not shown: 12 genomes with orthologs for Rru_A1748 only; 11 genomes with orthologs for Rru_A1017 only