Conservation of cofitness between Rru_A3229 and Rru_A0357 in Rhodospirillum rubrum S1H

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodospirillum rubrum S1H 1.0 Rru_A3229 Two Component Transcriptional Regulator, LuxR family (NCBI) 1.0 Rru_A0357 hypothetical protein (NCBI) 0.57 11
Magnetospirillum magneticum AMB-1 0.55 AMB_RS19675 DNA-binding response regulator 0.39 AMB_RS14390 TIGR00730 family Rossman fold protein — —
Azospirillum brasilense Sp245 0.42 AZOBR_RS20235 transcriptional regulator 0.50 AZOBR_RS10990 lysine decarboxylase low > 97
Azospirillum sp. SherDot2 0.41 MPMX19_04898 Transcriptional regulatory protein LnrK 0.50 MPMX19_06138 Putative cytokinin riboside 5'-monophosphate phosphoribohydrolase low > 112
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS19300 response regulator transcription factor 0.47 ABZR86_RS05935 TIGR00730 family Rossman fold protein low > 74
Variovorax sp. SCN45 0.33 GFF5912 Two-component transcriptional response regulator, LuxR family, but with unusual receiver domain 0.41 GFF1152 Lysine decarboxylase family low > 127
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_05306 two component transcriptional regulator, LuxR family 0.45 H281DRAFT_04542 hypothetical protein low > 103
Dechlorosoma suillum PS 0.31 Dsui_0382 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 0.41 Dsui_0979 TIGR00730 family protein low > 51
Bosea sp. OAE506 0.31 ABIE41_RS24085 response regulator transcription factor 0.45 ABIE41_RS21595 TIGR00730 family Rossman fold protein — —
Sinorhizobium meliloti 1021 0.31 SMa1550 Response regulator 0.44 SMc02544 hypothetical protein low > 103
Pseudomonas stutzeri RCH2 0.31 Psest_2864 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 0.41 Psest_3243 TIGR00730 family protein low > 67
Marinobacter adhaerens HP15 0.30 HP15_812 two component transcriptional regulator, LuxR family 0.42 HP15_3835 conserved hypothetical protein — —
Paraburkholderia graminis OAS925 0.30 ABIE53_006519 DNA-binding NarL/FixJ family response regulator 0.45 ABIE53_001565 uncharacterized protein (TIGR00730 family) 0.21 27
Burkholderia phytofirmans PsJN 0.30 BPHYT_RS24080 LuxR family transcriptional regulator 0.45 BPHYT_RS06500 LOG family protein — —
Pseudomonas sp. RS175 0.30 PFR28_01803 Transcriptional regulatory protein DegU 0.45 PFR28_05145 'Putative cytokinin riboside 5'-monophosphate phosphoribohydrolase' transl_table=11 low > 88
Pseudomonas fluorescens FW300-N2C3 0.30 AO356_28105 LuxR family transcriptional regulator 0.45 AO356_08535 LOG family protein low > 104
Pseudomonas putida KT2440 0.30 PP_2665 Glycerol metabolism activator 0.45 PP_4871 putative lysine decarboxylase family protein low > 96
Pseudomonas fluorescens FW300-N2E2 0.30 Pf6N2E2_1399 Transcriptional regulator, LuxR family 0.45 Pf6N2E2_3589 Lysine decarboxylase family low > 103
Pseudomonas sp. S08-1 0.29 OH686_18240 Two-component transcriptional response regulator, LuxR family 0.41 OH686_16655 Lysine decarboxylase family low > 80
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_16835 LuxR family transcriptional regulator 0.44 AO353_13300 LOG family protein low > 101
Pseudomonas fluorescens GW456-L13 0.29 PfGW456L13_3528 Transcriptional regulator, LuxR family 0.43 PfGW456L13_132 Lysine decarboxylase family low > 87
Rhizobium sp. OAE497 0.29 ABIE40_RS02405 response regulator transcription factor 0.47 ABIE40_RS06210 TIGR00730 family Rossman fold protein low > 107
Paraburkholderia sabiae LMG 24235 0.29 QEN71_RS07810 response regulator transcription factor 0.44 QEN71_RS24290 TIGR00730 family Rossman fold protein low > 153
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_4489 Transcriptional regulator, LuxR family 0.43 Pf1N1B4_1389 Lysine decarboxylase family low > 87
Agrobacterium fabrum C58 0.28 Atu0484 two component response regulator 0.47 Atu1066 hypothetical protein low > 89
Rhodanobacter sp. FW510-T8 0.28 OKGIIK_15195 LuxR family transcriptional regulator 0.44 OKGIIK_05925 TIGR00730 family Rossman fold protein low > 52
Cupriavidus basilensis FW507-4G11 0.28 RR42_RS27790 LuxR family transcriptional regulator 0.44 RR42_RS05385 LOG family protein low > 128
Rhodanobacter denitrificans MT42 0.28 LRK55_RS08190 response regulator transcription factor 0.44 LRK55_RS00740 TIGR00730 family Rossman fold protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS08425 response regulator transcription factor 0.44 LRK54_RS00965 TIGR00730 family Rossman fold protein low > 59
Acinetobacter radioresistens SK82 0.27 MPMX26_02902 Transcriptional activator protein ExaE 0.41 MPMX26_02735 Putative cytokinin riboside 5'-monophosphate phosphoribohydrolase low > 36
Dinoroseobacter shibae DFL-12 0.27 Dshi_0465 two component transcriptional regulator, LuxR family (RefSeq) 0.47 Dshi_1767 hypothetical protein (RefSeq) low > 64
Ralstonia solanacearum GMI1000 0.27 RS_RS21845 DNA-binding response regulator 0.43 RS_RS10470 TIGR00730 family Rossman fold protein low > 80
Brevundimonas sp. GW460-12-10-14-LB2 0.27 A4249_RS15200 response regulator transcription factor 0.36 A4249_RS08515 TIGR00730 family Rossman fold protein — —
Phaeobacter inhibens DSM 17395 0.27 PGA1_c19640 transcriptional regulator, containing response regulator domain 0.42 PGA1_c19080 TIGR00730 family protein low > 62
Rhodopseudomonas palustris CGA009 0.27 TX73_004390 response regulator transcription factor 0.45 TX73_010330 TIGR00730 family Rossman fold protein low > 86
Lysobacter sp. OAE881 0.26 ABIE51_RS01665 response regulator transcription factor 0.45 ABIE51_RS08970 TIGR00730 family Rossman fold protein — —
Ralstonia sp. UNC404CL21Col 0.25 ABZR87_RS14200 response regulator transcription factor 0.46 ABZR87_RS15005 TIGR00730 family Rossman fold protein low > 80
Ralstonia solanacearum PSI07 0.24 RPSI07_RS06675 DNA-binding response regulator 0.45 RPSI07_RS14205 TIGR00730 family Rossman fold protein low > 81
Ralstonia solanacearum IBSBF1503 0.24 RALBFv3_RS16770 DNA-binding response regulator 0.45 RALBFv3_RS03100 TIGR00730 family Rossman fold protein low > 76
Ralstonia solanacearum UW163 0.24 UW163_RS18125 DNA-binding response regulator 0.45 UW163_RS10625 TIGR00730 family Rossman fold protein — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.23 GFF5823 Nitrate/nitrite response regulator protein 0.41 GFF4273 Lysine decarboxylase family — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.20 CA264_09180 DNA-binding response regulator 0.41 CA264_15135 TIGR00730 family Rossman fold protein low > 74
Castellaniella sp019104865 MT123 0.19 ABCV34_RS08970 response regulator transcription factor 0.32 ABCV34_RS10940 TIGR00730 family Rossman fold protein low > 48
Dickeya dadantii 3937 0.18 DDA3937_RS11645 response regulator transcription factor 0.36 DDA3937_RS17825 TIGR00730 family Rossman fold protein low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.18 CA265_RS21285 DNA-binding response regulator 0.35 CA265_RS10665 Rossman fold protein, TIGR00730 family low > 88
Dickeya dianthicola ME23 0.18 DZA65_RS12190 response regulator transcription factor 0.35 DZA65_RS18910 TIGR00730 family Rossman fold protein low > 75
Dickeya dianthicola 67-19 0.18 HGI48_RS11705 response regulator 0.35 HGI48_RS17765 TIGR00730 family Rossman fold protein low > 71
Bacteroides stercoris CC31F 0.17 HMPREF1181_RS04510 response regulator transcription factor 0.38 HMPREF1181_RS01670 TIGR00730 family Rossman fold protein low > 56

Not shown: 35 genomes with orthologs for Rru_A3229 only; 13 genomes with orthologs for Rru_A0357 only