Homologs of PfGW456L13_3307 from Pseudomonas fluorescens GW456-L13

Exonuclease SbcD
SEED: Exonuclease SbcD
KEGG: exonuclease SbcD

60 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3307 Exonuclease SbcD strong 100 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4633 Exonuclease SbcD no data 94 100
o Pseudomonas fluorescens FW300-N2E3 AO353_23680 exonuclease SbcD insig. 92 100
o Pseudomonas fluorescens FW300-N2C3 AO356_24630 exonuclease SbcD insig. 90 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_619 Exonuclease SbcD insig. 90 100
o Pseudomonas sp. RS175 PFR28_01589 Nuclease SbcCD subunit D insig. 89 100
o Pseudomonas syringae pv. syringae B728a Psyr_1715 Exodeoxyribonuclease I subunit D insig. 86 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1715 Exodeoxyribonuclease I subunit D insig. 86 100
o Pseudomonas simiae WCS417 PS417_15115 exonuclease SbcD strong 85 100
o Pseudomonas fluorescens SBW25 PFLU_RS17135 exonuclease subunit SbcD insig. 85 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS17135 exonuclease subunit SbcD insig. 85 100
o Pseudomonas putida KT2440 PP_2025 Exonuclease SbcD sig. 77 100
o Pseudomonas stutzeri RCH2 Psest_3539 exonuclease SbcD sig. 65 100
o Acinetobacter radioresistens SK82 MPMX26_02402 Nuclease SbcCD subunit D insig. 46 99
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS09930 exonuclease SbcCD subunit D insig. 41 99
o Azospirillum sp. SherDot2 MPMX19_04315 Nuclease SbcCD subunit D insig. 40 99
o Bacteroides ovatus ATCC 8483 BACOVA_00394 exonuclease SbcCD, D subunit insig. 37 95
o Bacteroides thetaiotaomicron VPI-5482 BT0244 putative exonuclease (NCBI ptt file) insig. 36 99
o Azospirillum brasilense Sp245 AZOBR_RS18495 metallophosphatase insig. 39 99
o Phocaeicola dorei CL03T12C01 ABI39_RS02545 exonuclease SbcCD subunit D insig. 37 96
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08350 exonuclease SbcCD subunit D C-terminal domain-containing protein insig. 35 97
o Rahnella sp. WP5 EX31_RS22035 exonuclease subunit SbcD insig. 36 84
o Erwinia tracheiphila SCR3 LU632_RS18930 sbcD exonuclease subunit SbcD insig. 35 81
  Alteromonas macleodii MIT1002 MIT1002_00897 Nuclease SbcCD subunit D insig. 36 68
o Pantoea sp. MT58 IAI47_14860 exonuclease subunit SbcD insig. 36 81
o Pectobacterium carotovorum WPP14 HER17_RS16045 exonuclease subunit SbcD cofit 32 84
o Dickeya dadantii 3937 DDA3937_RS05420 exonuclease subunit SbcD strong 31 98
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_11095 exonuclease sbcCD subunit D insig. 31 98
o Klebsiella michiganensis M5al BWI76_RS06225 exonuclease sbcCD subunit D insig. 30 99
o Serratia liquefaciens MT49 IAI46_04770 exonuclease subunit SbcD insig. 34 81
o Dickeya dianthicola ME23 DZA65_RS05805 exonuclease subunit SbcD insig. 31 92
o Dickeya dianthicola 67-19 HGI48_RS05480 exonuclease subunit SbcD insig. 31 92
o Escherichia fergusonii Becca EFB2_03659 Nuclease SbcCD subunit D insig. 31 100
o Escherichia coli ECOR27 NOLOHH_01480 sbcD exonuclease subunit SbcD cofit 31 92
o Escherichia coli Nissle 1917 ECOLIN_RS02405 exonuclease subunit SbcD insig. 31 100
o Escherichia coli BL21 ECD_00346 exonuclease, dsDNA, ATP-dependent insig. 31 92
o Escherichia coli ECRC101 OKFHMN_08550 sbcD exonuclease subunit SbcD insig. 31 92
o Escherichia coli ECRC101 MCAODC_27775 sbcD exonuclease subunit SbcD insig. 31 92
o Escherichia coli ECRC102 NIAGMN_06605 sbcD exonuclease subunit SbcD sig. 31 92
o Escherichia coli ECRC62 BNILDI_22895 sbcD exonuclease subunit SbcD insig. 31 92
o Escherichia coli ECRC98 JDDGAC_12205 sbcD exonuclease subunit SbcD no data 31 92
o Escherichia coli ECRC99 KEDOAH_19415 sbcD exonuclease subunit SbcD no data 31 92
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03278 Nuclease SbcCD subunit D insig. 31 92
o Escherichia coli BW25113 b0398 sbcD exonuclease, dsDNA, ATP-dependent (NCBI) sig. 31 92
o Escherichia coli ECOR38 HEPCGN_07190 sbcD exonuclease subunit SbcD cofit 31 92
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4294 Exonuclease SbcD insig. 30 92
o Enterobacter asburiae PDN3 EX28DRAFT_2576 Exodeoxyribonuclease I subunit D (EC 3.1.11.1) cofit 32 81
o Enterobacter sp. TBS_079 MPMX20_00985 Nuclease SbcCD subunit D insig. 30 92
  Shewanella amazonensis SB2B Sama_1267 exonuclease SbcD, putative (RefSeq) sig. 37 68
o Cupriavidus basilensis FW507-4G11 RR42_RS35935 exonuclease SbcD insig. 31 96
  Shewanella oneidensis MR-1 SO2844 exonuclease SbcD, putative (NCBI ptt file) sig. 32 78
  Vibrio cholerae E7946 ATCC 55056 CSW01_16840 exonuclease sbcCD subunit D insig. 34 70
  Shewanella sp. ANA-3 Shewana3_2612 exodeoxyribonuclease I subunit D (RefSeq) insig. 33 78
  Shewanella loihica PV-4 Shew_2457 nuclease SbcCD, D subunit (RefSeq) sig. 33 64
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1707 exonuclease SbcD insig. 29 98
  Fusobacterium nucleatum SB010 HUW76_07460 exonuclease SbcCD subunit D cofit 27 28
  Variovorax sp. SCN45 GFF48 DNA double-strand break repair protein Mre11 insig. 25 67
  Desulfovibrio vulgaris Miyazaki F DvMF_2312 metallophosphoesterase (RefSeq) sig. 23 67
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1556 Predicted phosphohydrolases insig. 31 21
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00180 DNA repair exonuclease cofit 24 65