Homologs of Pf6N2E2_2039 from Pseudomonas fluorescens FW300-N2E2

Sigma-54 dependent transcriptional regulator
SEED: Sigma-54 dependent transcriptional regulator

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2039 Sigma-54 dependent transcriptional regulator sig. 100 100
o Pseudomonas fluorescens FW300-N2C3 AO356_00410 Fis family transcriptional regulator sig. 97 100
o Pseudomonas sp. RS175 PFR28_01397 Anaerobic nitric oxide reductase transcription regulator NorR sig. 95 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5631 Sigma-54 dependent transcriptional regulator insig. 91 100
o Pseudomonas sp. DMC3 GFF3656 Anaerobic nitric oxide reductase transcription regulator NorR insig. 90 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2875 Sigma-54 dependent transcriptional regulator strong 90 100
o Pseudomonas fluorescens FW300-N2E3 AO353_21780 Fis family transcriptional regulator insig. 89 100
o Pseudomonas simiae WCS417 PS417_12160 Fis family transcriptional regulator insig. 83 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03364 Anaerobic nitric oxide reductase transcription regulator NorR cofit 83 99
o Pseudomonas fluorescens SBW25 PFLU_RS12850 sigma-54-dependent Fis family transcriptional regulator insig. 84 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS12850 sigma-54-dependent Fis family transcriptional regulator sig. 84 99
o Pseudomonas sp. SVBP6 COO64_RS23875 sigma-54-dependent Fis family transcriptional regulator insig. 79 99
o Pseudomonas sp. S08-1 OH686_00830 Transcriptional regulator cofit 75 99
o Pseudomonas putida KT2440 PP_3075 putative transcriptional regulator strong 75 99
o Pseudomonas aeruginosa PA14 IKLFDK_09800 sigma-54-dependent transcriptional regulator HbcR insig. 73 99
o Burkholderia phytofirmans PsJN BPHYT_RS34340 Fis family transcriptional regulator strong 56 97
o Paraburkholderia graminis OAS925 ABIE53_004708 transcriptional regulator with PAS, ATPase and Fis domain insig. 57 97
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03547 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding Fis domains insig. 56 97
o Cupriavidus basilensis FW507-4G11 RR42_RS10735 Fis family transcriptional regulator insig. 57 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS17125 sigma 54-interacting transcriptional regulator insig. 57 97
o Azospirillum sp. SherDot2 MPMX19_06065 Anaerobic nitric oxide reductase transcription regulator NorR cofit 52 97
o Pseudomonas stutzeri RCH2 Psest_1071 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains strong 50 97
o Azospirillum brasilense Sp245 AZOBR_RS21185 Fis family transcriptional regulator insig. 51 98
o Pseudomonas segetis P6 MPMX49_00786 Anaerobic nitric oxide reductase transcription regulator NorR insig. 49 97
  Azospirillum sp. SherDot2 MPMX19_05582 Anaerobic nitric oxide reductase transcription regulator NorR insig. 51 98
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5124 Sigma-54 dependent transcriptional regulator insig. 48 98
o Marinobacter adhaerens HP15 HP15_3793 protein containing RNA polymerase sigma factor 54, interaction / helix-turn-helix, Fis-type insig. 52 95
o Variovorax sp. OAS795 ABID97_RS17700 sigma 54-interacting transcriptional regulator insig. 49 96
o Variovorax sp. SCN45 GFF518 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains insig. 48 97
o Acidovorax sp. GW101-3H11 Ac3H11_63 Sigma-54 dependent transcriptional regulator insig. 47 96
  Azospirillum sp. SherDot2 MPMX19_03130 Anaerobic nitric oxide reductase transcription regulator NorR insig. 49 95
  Azospirillum brasilense Sp245 AZOBR_RS26990 Fis family transcriptional regulator insig. 46 97
o Xanthobacter sp. DMC5 GFF2822 Anaerobic nitric oxide reductase transcription regulator NorR insig. 47 97
o Desulfovibrio vulgaris Miyazaki F DvMF_1933 PAS modulated sigma54 specific transcriptional regulator, Fis family (RefSeq) insig. 40 95
  Pseudomonas stutzeri RCH2 Psest_1765 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains strong 43 68
  Cupriavidus basilensis FW507-4G11 RR42_RS11255 Fis family transcriptional regulator strong 38 93
  Burkholderia phytofirmans PsJN BPHYT_RS30045 ATPase AAA insig. 41 87
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02520 Anaerobic nitric oxide reductase transcription regulator NorR cofit 38 97
  Escherichia fergusonii Becca EFB2_01192 Formate hydrogenlyase transcriptional activator FhlA cofit 45 71
  Escherichia coli Nissle 1917 ECOLIN_RS15260 formate hydrogenlyase transcriptional activator FlhA insig. 45 71
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01779 DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains insig. 42 82
  Escherichia fergusonii Becca EFB2_01635 Regulatory protein AtoC insig. 39 76
  Escherichia coli ECOR38 HEPCGN_22430 atoC acetoacetate metabolism transcriptional regulator AtoC insig. 39 76
  Escherichia coli Nissle 1917 ECOLIN_RS12965 acetoacetate metabolism transcriptional regulator AtoC no data 39 76
  Pseudomonas sp. S08-1 OH686_02855 Flagellar regulatory protein FleQ cofit 43 68
  Escherichia coli BL21 ECD_02147 fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein insig. 39 76
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01490 Regulatory protein AtoC insig. 39 76
  Escherichia coli BW25113 b2220 atoC fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) insig. 39 76
  Pseudomonas syringae pv. syringae B728a Psyr_3461 Helix-turn-helix, Fis-type strong 43 68
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3461 Helix-turn-helix, Fis-type cofit 43 68
  Pseudomonas sp. SVBP6 COO64_RS07975 sigma-54 dependent transcriptional regulator insig. 48 66
  Escherichia coli ECRC100 OKFHMN_20540 flhA formate hydrogenlyase transcriptional activator FlhA insig. 45 71
  Escherichia coli ECRC101 MCAODC_11065 flhA formate hydrogenlyase transcriptional activator FlhA insig. 45 71
  Escherichia coli ECRC102 NIAGMN_18310 flhA formate hydrogenlyase transcriptional activator FlhA insig. 45 71
  Escherichia coli ECRC98 JDDGAC_24205 flhA formate hydrogenlyase transcriptional activator FlhA insig. 45 71
  Escherichia coli ECRC99 KEDOAH_07595 flhA formate hydrogenlyase transcriptional activator FlhA no data 45 71
  Pseudomonas sp. SVBP6 COO64_RS21300 fleQ transcriptional regulator FleQ cofit 43 68
  Methylophilus sp. DMC18 GFF1426 Transcriptional regulatory protein ZraR insig. 40 88
  Cupriavidus basilensis FW507-4G11 RR42_RS01330 Fis family transcriptional regulator insig. 37 93
  Escherichia coli ECRC62 BNILDI_10935 flhA formate hydrogenlyase transcriptional activator FlhA cofit 45 71
  Pseudomonas aeruginosa PA14 IKLFDK_10840 propionate catabolism operon regulatory protein PrpR sig. 36 96
  Escherichia coli ECOR27 NOLOHH_12385 flhA formate hydrogenlyase transcriptional activator FlhA insig. 45 71
  Herbaspirillum seropedicae SmR1 HSERO_RS23170 ATPase AAA insig. 47 65
  Escherichia coli BL21 ECD_02581 formate hydrogenlyase transcriptional activator insig. 45 71
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01003 Formate hydrogenlyase transcriptional activator FhlA insig. 45 71
  Escherichia coli BW25113 b2731 fhlA DNA-binding transcriptional activator (NCBI) insig. 45 71
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04163 Anaerobic nitric oxide reductase transcription regulator NorR strong 42 68
  Pseudomonas simiae WCS417 PS417_19825 ATPase AAA strong 42 68
  Variovorax sp. SCN45 GFF3669 Two-component system response regulator protein no data 42 79
  Marinobacter adhaerens HP15 HP15_2330 two component, sigma54 specific, transcriptional regulator, Fis family strong 41 70
  Pseudomonas fluorescens SBW25 PFLU_RS21795 sigma-54-dependent Fis family transcriptional regulator strong 42 68
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21795 sigma-54-dependent Fis family transcriptional regulator strong 42 68
  Pseudomonas putida KT2440 PP_4373 Transcriptional regulator FleQ strong 42 68
  Caulobacter crescentus NA1000 CCNA_03424 AAA-family response regulator tacA strong 41 72
  Caulobacter crescentus NA1000 Δfur CCNA_03424 AAA-family response regulator tacA cofit 41 72
  Klebsiella pneumoniae MKP103 KDGMDA_03040 formate hydrogenlyase transcriptional activator FlhA insig. 46 71
  Klebsiella michiganensis M5al BWI76_RS22370 transcriptional regulator FhlA insig. 45 72
  Pseudomonas sp. BP01 JOY50_RS00705 fleQ transcriptional regulator FleQ sig. 42 68
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4725 Formate hydrogenlyase transcriptional activator insig. 44 71
  Pseudomonas sp. DMC3 GFF2445 Anaerobic nitric oxide reductase transcription regulator NorR cofit 42 68
  Pseudomonas sp. RS175 PFR28_00828 Anaerobic nitric oxide reductase transcription regulator NorR strong 42 68
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3599 Flagellar regulatory protein FleQ insig. 42 68
  Pseudomonas fluorescens FW300-N2C3 AO356_03855 AAA family ATPase strong 42 68
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2597 Flagellar regulatory protein FleQ strong 42 68
  Pseudomonas fluorescens FW300-N2E3 AO353_18660 AAA family ATPase strong 42 68
  Pseudomonas aeruginosa PA14 IKLFDK_05045 transcriptional regulator FleQ strong 43 68
  Enterobacter asburiae PDN3 EX28DRAFT_2822 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains insig. 45 71
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS01040 sigma-54-dependent Fis family transcriptional regulator insig. 44 66
  Pantoea sp. MT58 IAI47_19790 sigma-54-dependent Fis family transcriptional regulator insig. 37 94
  Pseudomonas simiae WCS417 PS417_11085 ATPase AAA insig. 37 96
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1790 Sigma-54 dependent transcriptional regulator insig. 37 96
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4357 Flagellar regulatory protein FleQ insig. 43 68
  Burkholderia phytofirmans PsJN BPHYT_RS26850 ATPase AAA strong 38 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS24790 sigma-54 dependent transcriptional regulator cofit 41 73
  Paraburkholderia graminis OAS925 ABIE53_001365 DNA-binding NtrC family response regulator strong 39 80
  Pseudomonas segetis P6 MPMX49_03150 Regulatory protein AtoC strong 43 67
  Desulfovibrio vulgaris Hildenborough JW710 DVU2114 atoC sigma-54 dependent transcriptional regulator/response regulator (TIGR) insig. 43 73
  Lysobacter sp. OAE881 ABIE51_RS01360 nitrogen regulation protein NR(I) cofit 39 91
  Pseudomonas putida KT2440 PP_2790 Sigma-54 dependent sensory box protein strong 36 96
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS15090 sigma-54-dependent Fis family transcriptional regulator insig. 42 72