Homologs of Pf1N1B4_3977 from Pseudomonas fluorescens FW300-N1B4

RNA polymerase sigma-54 factor RpoN
SEED: RNA polymerase sigma-54 factor RpoN
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3977 RNA polymerase sigma-54 factor RpoN insig. 100 100
o Pseudomonas fluorescens FW300-N2E3 AO353_20305 RNA polymerase subunit sigma-24 no data 91 90
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2582 RNA polymerase sigma-54 factor RpoN insig. 92 90
o Pseudomonas fluorescens FW300-N2C3 AO356_01625 RNA polymerase subunit sigma-24 insig. 88 90
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2200 RNA polymerase sigma-54 factor RpoN sig. 86 90
o Pseudomonas fluorescens SBW25 PFLU_RS19010 sigma-70 family RNA polymerase sigma factor insig. 88 90
o Pseudomonas fluorescens SBW25-INTG PFLU_RS19010 sigma-70 family RNA polymerase sigma factor sig. 88 90
o Pseudomonas sp. RS175 PFR28_01251 ECF RNA polymerase sigma factor EcfG insig. 86 90
o Pseudomonas simiae WCS417 PS417_17070 RNA polymerase subunit sigma-24 insig. 86 90
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03722 ECF RNA polymerase sigma factor EcfG no data 86 90
o Pseudomonas sp. DMC3 GFF1465 ECF RNA polymerase sigma factor EcfG insig. 86 90
o Pseudomonas orientalis W4I3 QF045_RS18740 sigma-70 family RNA polymerase sigma factor insig. 85 90
o Pseudomonas sp. SVBP6 COO64_RS10855 sigma-70 family RNA polymerase sigma factor insig. 64 90
o Pseudomonas putida KT2440 PP_2888 putative ECF sigma factor PrtI no data 60 90
o Pseudomonas sp. BP01 JOY50_RS05860 sigma-70 family RNA polymerase sigma factor no data 58 90
o Azospirillum sp. SherDot2 MPMX19_00923 hypothetical protein insig. 44 89
o Rhizobium sp. OAE497 ABIE40_RS22730 RNA polymerase sigma factor insig. 39 90
o Variovorax sp. OAS795 ABID97_RS16445 sigma-70 family RNA polymerase sigma factor no data 46 87
o Variovorax sp. SCN45 GFF215 RNA polymerase sigma-54 factor RpoN insig. 46 87
o Agrobacterium fabrum C58 Atu1485 ECF family sigma factor insig. 40 90
  Azospirillum sp. SherDot2 MPMX19_01371 hypothetical protein insig. 44 82
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05124 RNA polymerase sigma-70 factor, ECF subfamily insig. 46 82
o Azospirillum brasilense Sp245 AZOBR_RS10625 RNA polymerase sigma-70 factor insig. 44 83
  Azospirillum brasilense Sp245 AZOBR_RS23735 RNA polymerase no data 44 79
o Paraburkholderia sabiae LMG 24235 QEN71_RS23005 sigma-70 family RNA polymerase sigma factor insig. 43 84
o Burkholderia phytofirmans PsJN BPHYT_RS24740 RNA polymerase subunit sigma-24 sig. 42 87
o Paraburkholderia graminis OAS925 ABIE53_002425 RNA polymerase sigma-70 factor (ECF subfamily) insig. 45 82
  Burkholderia phytofirmans PsJN BPHYT_RS08240 RNA polymerase subunit sigma-24 sig. 45 82
  Paraburkholderia graminis OAS925 ABIE53_006215 RNA polymerase sigma-70 factor (ECF subfamily) insig. 42 83
  Azospirillum sp. SherDot2 MPMX19_00764 ECF RNA polymerase sigma factor EcfG insig. 43 84
o Sinorhizobium meliloti 1021 SMa0143 RNA polymerase ECF sigma factor insig. 42 82
  Paraburkholderia sabiae LMG 24235 QEN71_RS00095 RNA polymerase sigma factor insig. 41 83
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06547 RNA polymerase sigma-70 factor, ECF subfamily insig. 41 83
  Azospirillum brasilense Sp245 AZOBR_RS11020 RNA polymerase subunit sigma-70 no data 47 84
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3411 RNA polymerase sigma factor, sigma-70 family insig. 41 77
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF329 RNA polymerase sigma-54 factor RpoN insig. 40 82
  Azospirillum brasilense Sp245 AZOBR_RS06360 RNA polymerase subunit sigma-24 no data 42 84
o Magnetospirillum magneticum AMB-1 AMB_RS13315 hypothetical protein insig. 42 90
o Ralstonia solanacearum GMI1000 RS_RS14950 RNA polymerase sigma factor no data 43 84
  Sphingobium sp. HT1-2 GFF4975 RNA polymerase ECF-type sigma factor cofit 43 81
o Cupriavidus basilensis FW507-4G11 RR42_RS19070 DNA-directed RNA polymerase sigma-70 factor insig. 40 84
o Alteromonas macleodii MIT1002 MIT1002_03872 RNA polymerase sigma factor SigM insig. 36 83
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3853 RNA polymerase sigma factor, sigma-70 family insig. 40 85
  Rhizobium sp. OAE497 ABIE40_RS11455 RNA polymerase sigma factor insig. 39 87
  Xanthobacter sp. DMC5 GFF2321 ECF RNA polymerase sigma factor EcfG no data 40 83
  Sinorhizobium meliloti 1021 SMc02713 RNA polymerase sigma-E factor (sigma-24) protein strong 39 80
o Ralstonia solanacearum PSI07 RPSI07_RS10230 RNA polymerase sigma factor no data 43 84
o Ralstonia sp. UNC404CL21Col ABZR87_RS02660 RNA polymerase sigma factor insig. 38 82
  Sphingobium sp. HT1-2 GFF2028 hypothetical protein cofit 38 90
  Cupriavidus basilensis FW507-4G11 RR42_RS32410 RNA polymerase subunit sigma-24 no data 43 77
  Sinorhizobium meliloti 1021 SMc04051 RNA polymerase sigma-E factor (sigma-24) protein insig. 40 84
  Sphingobium sp. HT1-2 GFF1466 RNA polymerase sigma-54 factor RpoN insig. 40 77
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4350 RNA polymerase sigma-54 factor RpoN insig. 43 80
  Sinorhizobium meliloti 1021 SMc01419 RNA polymerase sigma factor protein sig. 35 89
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS02635 RNA polymerase sigma factor insig. 40 77
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS07010 RNA polymerase sigma factor no data 40 84
o Ralstonia solanacearum UW163 UW163_RS06605 RNA polymerase sigma factor no data 40 84
  Sphingobium sp. HT1-2 GFF5151 RNA polymerase ECF-type sigma factor cofit 41 81
  Dechlorosoma suillum PS Dsui_1302 RNA polymerase sigma factor, sigma-70 family cofit 42 79
  Herbaspirillum seropedicae SmR1 HSERO_RS13530 RNA polymerase subunit sigma-24 no data 44 80
  Rhizobium sp. OAE497 ABIE40_RS20320 sigma-70 family RNA polymerase sigma factor insig. 41 76
  Caulobacter crescentus NA1000 CCNA_03589 RNA polymerase EcfG family sigma factor sigT strong 36 82
  Caulobacter crescentus NA1000 Δfur CCNA_03589 RNA polymerase EcfG family sigma factor sigT cofit 36 82
  Azospirillum sp. SherDot2 MPMX19_01197 ECF RNA polymerase sigma factor EcfG insig. 34 81
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05041 RNA polymerase sigma-70 factor, ECF subfamily insig. 39 82
  Azospirillum brasilense Sp245 AZOBR_RS14755 RNA polymerase sigma-70 factor insig. 34 81
  Sphingobium sp. HT1-2 GFF2317 RNA polymerase ECF-type sigma factor cofit 39 80
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14775 sigma-70 family RNA polymerase sigma factor strong 38 76
  Agrobacterium fabrum C58 Atu4160 RNA polymerase sigma factor strong 37 77
  Sphingobium sp. HT1-2 GFF4551 hypothetical protein cofit 40 76
  Sinorhizobium meliloti 1021 SM_b21484 RNA polymerase sigma-E factor (sigma-24) protein insig. 39 80
o Dinoroseobacter shibae DFL-12 Dshi_3835 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 37 80
  Phaeobacter inhibens DSM 17395 PGA1_78p00070 'RNA polymerase sigma-70, ECF subfamily; ECF26 subgroup' no data 40 76
  Rhodopseudomonas palustris CGA009 TX73_021900 sigma-70 family RNA polymerase sigma factor strong 37 77
  Rhizobium sp. OAE497 ABIE40_RS27415 sigma-70 family RNA polymerase sigma factor insig. 35 83
  Kangiella aquimarina DSM 16071 B158DRAFT_0015 RNA polymerase sigma factor, sigma-70 family insig. 38 77
  Caulobacter crescentus NA1000 CCNA_02977 RNA polymerase ECF-type sigma factor sigU strong 36 84
  Caulobacter crescentus NA1000 Δfur CCNA_02977 RNA polymerase ECF-type sigma factor sigU cofit 36 84
o Mycobacterium tuberculosis H37Rv Rv3223c Alternative RNA polymerase sigma-E factor (sigma-24) SigH (RPOE) insig. 33 82
  Bosea sp. OAE506 ABIE41_RS04095 sigma-70 family RNA polymerase sigma factor strong 39 77
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05043 RNA polymerase sigma-70 factor, ECF subfamily no data 36 85
  Paraburkholderia sabiae LMG 24235 QEN71_RS36705 RNA polymerase sigma factor insig. 37 86
  Phaeobacter inhibens DSM 17395 PGA1_c27070 RNA polymerase sigma factor 70 (ECF15 subgroup, ECF26 subgroup) insig. 35 83
  Paraburkholderia graminis OAS925 ABIE53_003943 RNA polymerase sigma-70 factor (ECF subfamily) sig. 38 82
  Agrobacterium fabrum C58 Atu2030 ECF family sigma factor insig. 40 68
  Paraburkholderia sabiae LMG 24235 QEN71_RS32245 RNA polymerase sigma factor insig. 36 89
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3492 RNA polymerase sigma factor, sigma-70 family strong 38 86
  Rhodospirillum rubrum S1H Rru_A3287 Sigma-24 (FecI) (NCBI) no data 37 80
  Sphingobium sp. HT1-2 GFF5325 RNA polymerase ECF-type sigma factor cofit 37 78
  Rhizobium sp. OAE497 ABIE40_RS14450 RNA polymerase sigma factor insig. 35 80
o Rahnella sp. WP5 EX31_RS05375 sigma-70 family RNA polymerase sigma factor insig. 34 86
  Azospirillum sp. SherDot2 MPMX19_05043 hypothetical protein insig. 37 75
  Paraburkholderia graminis OAS925 ABIE53_003919 RNA polymerase sigma-70 factor (ECF subfamily) insig. 36 82
o Enterobacter asburiae PDN3 EX28DRAFT_2729 RNA polymerase sigma factor, sigma-70 family insig. 33 94
  Rhizobium sp. OAE497 ABIE40_RS03400 RNA polymerase sigma factor insig. 38 75
o Dickeya dadantii 3937 DDA3937_RS11055 sigma-70 family RNA polymerase sigma factor insig. 33 88
o Dickeya dianthicola 67-19 HGI48_RS11075 sigma-70 family RNA polymerase sigma factor insig. 33 88
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19215 RNA polymerase subunit sigma sig. 29 79
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0287 RNA polymerase sigma factor, sigma-70 family strong 27 82
o Pectobacterium carotovorum WPP14 HER17_RS09715 sigma-70 family RNA polymerase sigma factor cofit 33 84