| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| | Pseudomonas putida KT2440 | PP_4489 | | sigma-54 dependent transcriptional regulator | strong | 100 | 100 |
| o | Pseudomonas sp. BP01 | JOY50_RS01020 | | sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR | insig. | 99 | 100 |
| o | Pseudomonas sp. SVBP6 | COO64_RS21655 | | sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR | insig. | 94 | 100 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_03970 | | AAA family ATPase | strong | 93 | 100 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_18590 | | AAA family ATPase | strong | 93 | 99 |
| o | Pseudomonas sp. RS175 | PFR28_00803 | | Transcriptional regulatory protein TyrR | strong | 93 | 99 |
| o | Pseudomonas sp. DMC3 | GFF2415 | | Transcriptional regulatory protein TyrR | insig. | 92 | 100 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4393 | | Phenylalanine hydroxylase transcriptional activator PhhR | strong | 93 | 99 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3567 | | Phenylalanine hydroxylase transcriptional activator PhhR | sig. | 92 | 99 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2629 | | Phenylalanine hydroxylase transcriptional activator PhhR | strong | 92 | 99 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04177 | | Transcriptional regulatory protein TyrR | insig. | 92 | 100 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS21865 | | sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR | insig. | 91 | 100 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS21865 | | sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR | strong | 91 | 100 |
| o | Pseudomonas orientalis W4I3 | QF045_RS22025 | | sigma-54-dependent transcriptional regulator | insig. | 91 | 100 |
| o | Pseudomonas simiae WCS417 | PS417_19895 | | ATPase AAA | insig. | 91 | 100 |
| o | Pseudomonas segetis P6 | ACVTMO_RS13970 | | sigma-54-dependent transcriptional regulator | insig. | 90 | 100 |
| o | Pseudomonas sp. S08-1 | OH686_21240 | | Phenylalanine hydroxylase transcriptional activator PhhR | cofit | 89 | 99 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS44695 | | sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR | strong | 88 | 100 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS08115 | | sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR | strong | 88 | 99 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_03870 | | AAA family ATPase | cofit | 88 | 99 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_3574 | | Helix-turn-helix, Fis-type | insig. | 86 | 100 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3574 | | Helix-turn-helix, Fis-type | insig. | 86 | 100 |
| o | Pseudomonas stutzeri RCH2 | Psest_0782 | | Transcriptional regulator of aromatic amino acids metabolism | strong | 85 | 100 |
| o | Serratia liquefaciens MT49 | IAI46_13470 | | transcriptional regulator TyrR | cofit | 45 | 99 |
| o | Rahnella sp. WP5 | EX31_RS06335 | | transcriptional regulator TyrR | insig. | 45 | 99 |
| o | Klebsiella michiganensis M5al | BWI76_RS12485 | | TyrR family transcriptional regulator | sig. | 45 | 99 |
| o | Escherichia coli ECRC100 | OKFHMN_02305 | tyrR | transcriptional regulator TyrR | strong | 45 | 100 |
| o | Escherichia coli ECRC101 | MCAODC_15965 | tyrR | transcriptional regulator TyrR | strong | 45 | 100 |
| o | Escherichia coli ECRC102 | NIAGMN_26475 | tyrR | transcriptional regulator TyrR | strong | 45 | 100 |
| o | Escherichia coli ECRC98 | JDDGAC_04850 | tyrR | transcriptional regulator TyrR | insig. | 45 | 100 |
| o | Escherichia coli ECRC99 | KEDOAH_26470 | tyrR | transcriptional regulator TyrR | no data | 45 | 100 |
| o | Escherichia coli ECOR38 | HEPCGN_25885 | tyrR | transcriptional regulator TyrR | insig. | 45 | 100 |
| o | Escherichia fergusonii Becca | EFB2_02604 | | Transcriptional regulatory protein TyrR | strong | 45 | 100 |
| o | Escherichia coli Nissle 1917 | ECOLIN_RS07945 | | transcriptional regulator TyrR | no data | 45 | 100 |
| o | Escherichia coli BL21 | ECD_01300 | | aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase | strong | 45 | 100 |
| o | Escherichia coli ECOR27 | NOLOHH_20000 | tyrR | transcriptional regulator TyrR | strong | 45 | 100 |
| o | Escherichia coli ECRC62 | BNILDI_18150 | tyrR | transcriptional regulator TyrR | cofit | 45 | 100 |
| o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02359 | | Transcriptional regulatory protein TyrR | insig. | 45 | 100 |
| o | Escherichia coli BW25113 | b1323 | tyrR | DNA-binding transcriptional dual regulator, tyrosine-binding (NCBI) | strong | 45 | 100 |
| o | Enterobacter sp. TBS_079 | MPMX20_02454 | | Transcriptional regulatory protein TyrR | sig. | 43 | 99 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_19960 | | transcriptional regulator TyrR | insig. | 44 | 99 |
| o | Klebsiella pneumoniae MRSN742743 | KFA93_RS23730 | tyrR;go_function=transcription | transcriptional regulator TyrR | sig. | 44 | 99 |
| o | Dickeya dadantii 3937 | DDA3937_RS12390 | | transcriptional regulator TyrR | sig. | 44 | 99 |
| o | Pectobacterium carotovorum WPP14 | HER17_RS09575 | | transcriptional regulator TyrR | insig. | 44 | 99 |
| o | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_23050 | tyrR | transcriptional regulator TyrR | cofit | 43 | 100 |
| o | Erwinia tracheiphila SCR3 | LU632_RS11530 | tyrR | transcriptional regulator TyrR | insig. | 43 | 100 |
| o | Dickeya dianthicola ME23 | DZA65_RS12910 | | transcriptional regulator TyrR | insig. | 44 | 99 |
| o | Dickeya dianthicola 67-19 | HGI48_RS12460 | | transcriptional regulator TyrR | cofit | 44 | 99 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2679 | | Transcriptional repressor protein TyrR | strong | 45 | 99 |
| o | Enterobacter asburiae PDN3 | EX28DRAFT_0994 | | Transcriptional regulator of aromatic amino acids metabolism | insig. | 43 | 99 |
| o | Pantoea sp. MT58 | IAI47_09440 | | transcriptional regulator TyrR | cofit | 44 | 100 |
| o | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS06710 | | transcriptional regulator TyrR | cofit | 44 | 100 |
| o | Erwinia amylovora T8 | OLJFJH_13705 | | transcriptional regulator TyrR | cofit | 43 | 100 |
| o | Shewanella sp. ANA-3 | Shewana3_2779 | | transcriptional regulator, TyrR (RefSeq) | strong | 43 | 99 |
| o | Shewanella oneidensis MR-1 | SO1669 | tyrR | transcriptional regulatory protein TyrR (NCBI ptt file) | strong | 43 | 99 |
| o | Shewanella amazonensis SB2B | Sama_2220 | | transcriptional regulatory protein TyrR (RefSeq) | strong | 42 | 99 |
| o | Alteromonas macleodii MIT1002 | MIT1002_01147 | | Transcriptional regulatory protein TyrR | cofit | 43 | 100 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2687 | | transcriptional regulator, MerR family | insig. | 45 | 99 |
| o | Shewanella loihica PV-4 | Shew_1437 | | transcriptional regulator, TyrR (RefSeq) | strong | 42 | 99 |
| | Pseudomonas simiae WCS417 | PS417_22350 | | Fis family transcriptional regulator | insig. | 43 | 99 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04606 | | Transcriptional regulatory protein TyrR | cofit | 43 | 99 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_619 | | Sigma-54 dependent transcriptional regulator/sensory box protein | insig. | 43 | 99 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1870 | | Sigma-54 dependent transcriptional regulator/sensory box protein | cofit | 43 | 100 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS23990 | | sigma-54-dependent transcriptional regulator | insig. | 43 | 99 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS23990 | | sigma-54-dependent transcriptional regulator | sig. | 43 | 99 |
| o | Vibrio cholerae E7946 ATCC 55056 | CSW01_06605 | | transcriptional regulator TyrR | insig. | 41 | 99 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5560 | | Sigma-54 dependent transcriptional regulator/sensory box protein | insig. | 43 | 99 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_18180 | | Fis family transcriptional regulator | sig. | 43 | 99 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS18720 | | sigma-54-dependent transcriptional regulator | insig. | 43 | 100 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_12040 | | Fis family transcriptional regulator | sig. | 43 | 100 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS57760 | | sigma-54-dependent transcriptional regulator | sig. | 43 | 100 |
| | Pseudomonas sp. RS175 | PFR28_03381 | | Transcriptional regulatory protein TyrR | insig. | 43 | 99 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_03490 | | Fis family transcriptional regulator | strong | 43 | 99 |
| | Pseudomonas sp. BP01 | JOY50_RS11325 | | sigma-54-dependent transcriptional regulator | insig. | 42 | 99 |
| | Pseudomonas sp. DMC3 | GFF5167 | | Transcriptional regulatory protein TyrR | insig. | 42 | 99 |
| | Pseudomonas putida KT2440 | PP_0997 | | Sigma-54 dependent transcriptional regulator/sensory box protein | strong | 42 | 99 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1101 | | Helix-turn-helix, Fis-type | insig. | 42 | 99 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1101 | | Helix-turn-helix, Fis-type | insig. | 42 | 99 |
| | Pseudomonas segetis P6 | ACVTMO_RS18130 | | sigma-54-dependent transcriptional regulator | sig. | 42 | 99 |
| | Pseudomonas sp. SVBP6 | COO64_RS04460 | | sigma-54-dependent transcriptional regulator | insig. | 42 | 99 |
| | Azospirillum sp. SherDot2 | MPMX19_06098 | | Transcriptional regulatory protein TyrR | insig. | 44 | 99 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0569 | flrA | sigma-54 dependent transcriptional regulator (TIGR) | sig. | 35 | 99 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2153 | | PAS modulated sigma54 specific transcriptional regulator, Fis family (RefSeq) | insig. | 33 | 91 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0608 | | transcriptional regulator, NifA subfamily, Fis Family (RefSeq) | strong | 42 | 60 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU1949 | nifA-1 | nif-specific regulatory protein (TIGR) | strong | 42 | 60 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2200 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | no data | 37 | 65 |
| | Pseudomonas sp. RS175 | PFR28_01397 | | Anaerobic nitric oxide reductase transcription regulator NorR | sig. | 42 | 60 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2039 | | Sigma-54 dependent transcriptional regulator | sig. | 42 | 60 |
| | Pseudomonas sp. DMC3 | GFF3656 | | Anaerobic nitric oxide reductase transcription regulator NorR | insig. | 39 | 66 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_00410 | | Fis family transcriptional regulator | sig. | 42 | 60 |
| | Marinobacter adhaerens HP15 | HP15_328 | | two component, sigma54 specific, transcriptional regulator, Fis family | strong | 41 | 58 |
| | Pseudomonas putida KT2440 | PP_2790 | | Sigma-54 dependent sensory box protein | strong | 34 | 89 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_21780 | | Fis family transcriptional regulator | insig. | 35 | 79 |
| | Marinobacter adhaerens HP15 | HP15_523 | | two component, sigma54 specific, transcriptional regulator, Fis family | strong | 40 | 56 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5631 | | Sigma-54 dependent transcriptional regulator | insig. | 38 | 66 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS14390 | | ATPase AAA | strong | 45 | 47 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU2827 | | sigma-54 dependent transcriptional regulator (TIGR) | insig. | 34 | 80 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2875 | | Sigma-54 dependent transcriptional regulator | strong | 38 | 71 |
| | Azospirillum brasilense Sp245 | AZOBR_RS29300 | | Fis family transcriptional regulator | insig. | 46 | 49 |
| | Pseudomonas stutzeri RCH2 | Psest_1071 | | Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains | strong | 39 | 59 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1790 | | Sigma-54 dependent transcriptional regulator | insig. | 40 | 61 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU3220 | atoC | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | no data | 38 | 61 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1530 | | Flagellar regulatory protein FleQ | strong | 35 | 81 |
| | Pseudomonas segetis P6 | ACVTMO_RS06070 | | sigma-54-dependent transcriptional regulator | no data | 47 | 46 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS17530 | | nif-specific transcriptional activator NifA | insig. | 43 | 52 |
| | Serratia liquefaciens MT49 | IAI46_12235 | | sigma 54-interacting transcriptional regulator | insig. | 39 | 65 |
| | Klebsiella michiganensis M5al | BWI76_RS26560 | | sigma-54-dependent Fis family transcriptional regulator | cofit | 35 | 71 |
| | Shewanella amazonensis SB2B | Sama_0727 | | anaerobic nitric oxide reductase transcription regulator (RefSeq) | insig. | 44 | 56 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_10090 | | sigma-54-dependent response regulator transcription factor ZraR | insig. | 42 | 58 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS11255 | | Fis family transcriptional regulator | strong | 38 | 73 |
| | Azospirillum sp. SherDot2 | MPMX19_05290 | | Hydrogenase transcriptional regulatory protein hupR1 | insig. | 37 | 69 |
| | Azospirillum sp. SherDot2 | MPMX19_01840 | | Nif-specific regulatory protein | insig. | 43 | 54 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS24385 | zraR;go_function=sequence-specific | sigma-54-dependent response regulator transcription factor ZraR | insig. | 42 | 58 |
| | Klebsiella michiganensis M5al | BWI76_RS01605 | | transcriptional regulatory protein ZraR | insig. | 42 | 58 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS17395 | | sigma-54 dependent transcriptional regulator | insig. | 42 | 59 |
| | Pseudomonas orientalis W4I3 | QF045_RS14150 | | sigma 54-interacting transcriptional regulator | cofit | 37 | 68 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04045 | | Transcriptional regulatory protein ZraR | insig. | 41 | 58 |
| | Xanthobacter sp. DMC5 | GFF4834 | | Regulatory protein AtoC | insig. | 35 | 74 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02520 | | Anaerobic nitric oxide reductase transcription regulator NorR | cofit | 35 | 83 |
| | Shewanella loihica PV-4 | Shew_2341 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | insig. | 41 | 61 |
| | Pseudomonas sp. SVBP6 | COO64_RS23875 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 41 | 60 |
| | Pseudomonas simiae WCS417 | PS417_12160 | | Fis family transcriptional regulator | insig. | 35 | 81 |
| | Pseudomonas sp. S08-1 | OH686_17260 | | Two-component sensor CbrB: intrcellular carbon:nitrogen balance | strong | 46 | 46 |
| | Escherichia coli ECRC62 | BNILDI_06055 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 41 | 58 |
| | Escherichia coli BL21 | ECD_02147 | | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein | insig. | 38 | 60 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01490 | | Regulatory protein AtoC | insig. | 38 | 60 |
| | Escherichia coli BW25113 | b2220 | atoC | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) | insig. | 38 | 60 |
| | Escherichia coli ECOR38 | HEPCGN_22430 | atoC | acetoacetate metabolism transcriptional regulator AtoC | insig. | 38 | 60 |
| | Pseudomonas simiae WCS417 | PS417_11085 | | ATPase AAA | insig. | 35 | 84 |
| | Shewanella amazonensis SB2B | Sama_1549 | | response regulator receiver protein (RefSeq) | insig. | 42 | 58 |
| | Escherichia coli ECOR27 | NOLOHH_05465 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 40 | 58 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1489 | | Type IV fimbriae expression regulatory protein PilR | insig. | 40 | 56 |
| | Escherichia fergusonii Becca | EFB2_01635 | | Regulatory protein AtoC | insig. | 38 | 60 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS12965 | | acetoacetate metabolism transcriptional regulator AtoC | no data | 38 | 60 |
| | Pseudomonas sp. SVBP6 | COO64_RS02140 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 42 | 56 |
| | Klebsiella michiganensis M5al | BWI76_RS22370 | | transcriptional regulator FhlA | insig. | 39 | 63 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_29210 | | AAA family ATPase | insig. | 39 | 61 |
| | Dechlorosoma suillum PS | Dsui_2360 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | cofit | 49 | 46 |
| | Escherichia coli BL21 | ECD_03881 | | fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein | insig. | 40 | 58 |
| | Pantoea sp. MT58 | IAI47_19790 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 38 | 66 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS11715 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 34 | 83 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS11715 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 34 | 83 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03364 | | Anaerobic nitric oxide reductase transcription regulator NorR | cofit | 34 | 81 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_14400 | | Fis family transcriptional regulator | strong | 47 | 44 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5156 | | Two-component sensor CbrB: intrcellular carbon:nitrogen balance | strong | 46 | 46 |
| | Pantoea sp. MT58 | IAI47_21575 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 42 | 58 |
| | Pseudomonas stutzeri RCH2 | Psest_0705 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 39 | 58 |
| | Escherichia coli BL21 | ECD_02581 | | formate hydrogenlyase transcriptional activator | insig. | 38 | 64 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01003 | | Formate hydrogenlyase transcriptional activator FhlA | insig. | 38 | 64 |
| | Escherichia coli BW25113 | b2731 | fhlA | DNA-binding transcriptional activator (NCBI) | insig. | 38 | 64 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2149 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 41 | 56 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4188 | | Response regulator of zinc sigma-54-dependent two-component system | insig. | 41 | 58 |
| | Rhodopseudomonas palustris CGA009 | TX73_007390 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 45 | 49 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS12345 | | sigma-54-dependent Fis family transcriptional regulator | cofit | 41 | 59 |
| | Dechlorosoma suillum PS | Dsui_1154 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | insig. | 40 | 63 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_2822 | | Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains | insig. | 38 | 64 |
| | Escherichia coli ECOR27 | NOLOHH_11625 | uacR | Putative uric acid sigma-54-dependent transcriptional regulator UacR | insig. | 36 | 58 |
| | Escherichia coli ECRC100 | OKFHMN_19695 | uacR | Putative uric acid sigma-54-dependent transcriptional regulator UacR | cofit | 36 | 58 |
| | Escherichia coli ECRC101 | MCAODC_10220 | uacR | Putative uric acid sigma-54-dependent transcriptional regulator UacR | insig. | 36 | 58 |
| | Escherichia coli ECRC102 | NIAGMN_17465 | uacR | Putative uric acid sigma-54-dependent transcriptional regulator UacR | insig. | 36 | 58 |
| | Escherichia coli ECRC62 | BNILDI_10150 | uacR | Putative uric acid sigma-54-dependent transcriptional regulator UacR | cofit | 36 | 58 |
| | Escherichia coli ECRC98 | JDDGAC_23340 | uacR | Putative uric acid sigma-54-dependent transcriptional regulator UacR | insig. | 36 | 58 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_00846 | | Anaerobic nitric oxide reductase transcription regulator NorR | insig. | 36 | 58 |
| | Paraburkholderia graminis OAS925 | ABIE53_004708 | | transcriptional regulator with PAS, ATPase and Fis domain | insig. | 49 | 46 |
| | Escherichia fergusonii Becca | EFB2_01342 | | Transcriptional regulatory protein QseF | insig. | 46 | 47 |
| | Escherichia coli ECOR27 | NOLOHH_13170 | qseF | two-component system response regulator QseF/GlrR | strong | 46 | 47 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01153 | | Transcriptional regulatory protein GlrR | insig. | 46 | 47 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_16075 | | Fis family transcriptional regulator | strong | 45 | 46 |
| | Escherichia coli BW25113 | b4004 | zraR | fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein (NCBI) | insig. | 40 | 58 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21185 | | Fis family transcriptional regulator | insig. | 40 | 60 |
| | Variovorax sp. OAS795 | ABID97_RS17700 | | sigma 54-interacting transcriptional regulator | insig. | 38 | 69 |
| | Escherichia fergusonii Becca | EFB2_01032 | | Anaerobic nitric oxide reductase transcription regulator NorR | insig. | 36 | 58 |
| | Escherichia coli ECOR38 | HEPCGN_18985 | uacR | Putative uric acid sigma-54-dependent transcriptional regulator UacR | insig. | 36 | 58 |
| | Escherichia coli BW25113 | b2869 | ygeV | predicted DNA-binding transcriptional regulator (NCBI) | insig. | 36 | 58 |
| | Escherichia coli ECOR38 | HEPCGN_20640 | qseF | two-component system response regulator QseF/GlrR | strong | 46 | 47 |
| | Escherichia coli ECRC62 | BNILDI_11970 | qseF | two-component system response regulator QseF/GlrR | strong | 46 | 47 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00325 | | GAF modulated sigma54 specific transcriptional regulator, Fis family | insig. | 41 | 59 |
| | Escherichia coli ECOR38 | HEPCGN_11960 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 40 | 58 |
| | Pseudomonas sp. DMC3 | GFF4000 | | Regulatory protein AtoC | cofit | 39 | 58 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09510 | | sigma-54-dependent Fis family transcriptional regulator | sig. | 36 | 65 |
| | Escherichia coli BL21 | ECD_02702 | | putative sigma-54-interacting transcriptional activator | insig. | 36 | 58 |
| | Escherichia coli ECRC99 | KEDOAH_08435 | uacR | Putative uric acid sigma-54-dependent transcriptional regulator UacR | no data | 36 | 58 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS23090 | | sigma-54-dependent response regulator transcription factor ZraR | insig. | 40 | 58 |
| | Escherichia coli ECRC100 | OKFHMN_20540 | flhA | formate hydrogenlyase transcriptional activator FlhA | insig. | 38 | 64 |
| | Escherichia coli ECRC101 | MCAODC_11065 | flhA | formate hydrogenlyase transcriptional activator FlhA | insig. | 38 | 64 |
| | Escherichia coli ECRC102 | NIAGMN_18310 | flhA | formate hydrogenlyase transcriptional activator FlhA | insig. | 38 | 64 |
| | Escherichia coli ECRC98 | JDDGAC_24205 | flhA | formate hydrogenlyase transcriptional activator FlhA | insig. | 38 | 64 |
| | Escherichia coli ECRC99 | KEDOAH_07595 | flhA | formate hydrogenlyase transcriptional activator FlhA | no data | 38 | 64 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03547 | | Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding Fis domains | insig. | 49 | 46 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04930 | | Transcriptional regulatory protein ZraR | cofit | 48 | 44 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2455 | | Putative sensory histidine kinase YfhA | strong | 46 | 46 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU2359 | | sigma-54 dependent transcriptional regulator (TIGR) | insig. | 45 | 46 |
| | Rhodospirillum rubrum S1H | Rru_A1170 | | Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) | insig. | 39 | 64 |
| | Variovorax sp. SCN45 | GFF518 | | Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains | insig. | 38 | 68 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS34340 | | Fis family transcriptional regulator | strong | 48 | 46 |
| | Pseudomonas sp. RS175 | PFR28_03718 | | Transcriptional regulatory protein ZraR | strong | 47 | 44 |
| | Escherichia coli BL21 | ECD_02446 | | response regulator regulating glmY sRNA in two-component system with sensor protein GlrK | sig. | 46 | 47 |
| | Escherichia coli ECRC100 | OKFHMN_21495 | qseF | two-component system response regulator QseF/GlrR | cofit | 46 | 47 |
| | Escherichia coli ECRC101 | MCAODC_12025 | qseF | two-component system response regulator QseF/GlrR | cofit | 46 | 47 |
| | Escherichia coli ECRC102 | NIAGMN_19265 | qseF | two-component system response regulator QseF/GlrR | cofit | 46 | 47 |
| | Escherichia coli ECRC98 | JDDGAC_25160 | qseF | two-component system response regulator QseF/GlrR | cofit | 46 | 47 |
| | Escherichia coli ECRC99 | KEDOAH_06725 | qseF | two-component system response regulator QseF/GlrR | no data | 46 | 47 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS14455 | | two-component system response regulator GlrR | strong | 46 | 47 |
| | Escherichia coli BW25113 | b2554 | yfhA | predicted DNA-binding response regulator in two-component system (NCBI) | sig. | 46 | 47 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2858 | | Two-component sensor CbrB: intrcellular carbon:nitrogen balance | strong | 46 | 46 |
| | Variovorax sp. OAS795 | ABID97_RS06460 | | sigma 54-interacting transcriptional regulator | cofit | 42 | 55 |
| | Paraburkholderia graminis OAS925 | ABIE53_004383 | | transcriptional regulator of acetoin/glycerol metabolism | strong | 41 | 59 |
| | Escherichia fergusonii Becca | EFB2_04606 | | Transcriptional regulatory protein ZraR | insig. | 40 | 58 |
| | Marinobacter adhaerens HP15 | HP15_1891 | | two component, sigma54 specific, transcriptional regulator, Fis family | insig. | 39 | 62 |
| | Azospirillum sp. SherDot2 | MPMX19_03461 | | Regulatory protein AtoC | insig. | 38 | 60 |
| | Escherichia fergusonii Becca | EFB2_01192 | | Formate hydrogenlyase transcriptional activator FhlA | cofit | 38 | 64 |
| | Escherichia coli ECOR27 | NOLOHH_12385 | flhA | formate hydrogenlyase transcriptional activator FlhA | insig. | 38 | 64 |
| | Escherichia coli ECRC62 | BNILDI_10935 | flhA | formate hydrogenlyase transcriptional activator FlhA | cofit | 38 | 64 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS15260 | | formate hydrogenlyase transcriptional activator FlhA | insig. | 38 | 64 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS12850 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 36 | 79 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS12850 | | sigma-54-dependent Fis family transcriptional regulator | sig. | 36 | 79 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS39600 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 33 | 89 |
| | Erwinia amylovora T8 | OLJFJH_13990 | | AAA family ATPase | insig. | 48 | 44 |
| | Klebsiella michiganensis M5al | BWI76_RS22905 | | ATPase AAA | insig. | 48 | 44 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1524 | | Two-component sensor CbrB: intrcellular carbon:nitrogen balance | strong | 47 | 44 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS23710 | | response regulator GlrR | insig. | 45 | 47 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_11530 | | Fis family transcriptional regulator | insig. | 43 | 49 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0700 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | insig. | 39 | 63 |
| | Ralstonia solanacearum GMI1000 | RS_RS25105 | | sigma-54-dependent Fis family transcriptional regulator | cofit | 39 | 61 |
| | Pseudomonas putida KT2440 | PP_0051 | | putative sigma-54 dependent transcriptional regulator | insig. | 36 | 82 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS59400 | | sigma-54 dependent transcriptional regulator | insig. | 43 | 49 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_14200 | | transcriptional regulator | insig. | 39 | 56 |
| | Pseudomonas sp. S08-1 | OH686_00830 | | Transcriptional regulator | cofit | 38 | 66 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS17365 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 33 | 89 |
| | Pseudomonas putida KT2440 | PP_4696 | | Nitrogen regulation protein NR(I) | strong | 45 | 46 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_13865 | | nitrogen regulation protein NR(I) | insig. | 43 | 49 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS18165 | | sigma-54 dependent transcriptional regulator | insig. | 43 | 49 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU1063 | flrC | transcriptional regulatory protein (TIGR) | strong | 42 | 56 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS38530 | hbcR;inference=COORDINATES | sigma-54-dependent transcriptional regulator HbcR | insig. | 41 | 60 |
| | Escherichia coli ECRC98 | JDDGAC_16945 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 40 | 58 |
| | Xanthobacter sp. DMC5 | GFF2822 | | Anaerobic nitric oxide reductase transcription regulator NorR | insig. | 38 | 62 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2109 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 47 | 46 |
| | Pseudomonas segetis P6 | ACVTMO_RS03895 | | sigma-54 interaction domain-containing protein | insig. | 46 | 46 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_05195 | | sigma-54-dependent Fis family transcriptional regulator | sig. | 38 | 64 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS25735 | | sigma-54-dependent Fis family transcriptional regulator | strong | 46 | 46 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS25735 | | sigma-54-dependent Fis family transcriptional regulator | strong | 46 | 46 |
| | Pseudomonas simiae WCS417 | PS417_23895 | | Fis family transcriptional regulator | no data | 47 | 44 |
| | Pseudomonas sp. DMC3 | GFF4030 | | Transcriptional regulatory protein ZraR | strong | 45 | 46 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_03460 | | AAA family ATPase | insig. | 41 | 57 |
| | Lysobacter sp. OAE881 | ABIE51_RS01360 | | nitrogen regulation protein NR(I) | cofit | 46 | 47 |
| | Pseudomonas orientalis W4I3 | QF045_RS26155 | | sigma-54 dependent transcriptional regulator | strong | 46 | 46 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4389 | | Sigma-54 dependent transcriptional regulator | insig. | 38 | 61 |
| | Pseudomonas sp. BP01 | JOY50_RS27675 | | sigma-54 dependent transcriptional regulator | cofit | 46 | 44 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0823 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | insig. | 40 | 56 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_10840 | | propionate catabolism operon regulatory protein PrpR | sig. | 33 | 89 |