Homologs of truD from Rhodanobacter sp. FW510-T8

truD: tRNA pseudouridine(13) synthase TruD
SEED: tRNA pseudouridine 13 synthase (EC 4.2.1.-)
KEGG: tRNA pseudouridine synthase D

58 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodanobacter sp. FW510-T8 OKGIIK_08130 truD tRNA pseudouridine(13) synthase TruD insig. 100 100
o Rhodanobacter denitrificans MT42 LRK55_RS16365 tRNA pseudouridine(13) synthase TruD insig. 92 99
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS16640 tRNA pseudouridine(13) synthase TruD sig. 92 99
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS06605 tRNA pseudouridine(13) synthase TruD insig. 81 99
o Lysobacter sp. OAE881 ABIE51_RS06470 tRNA pseudouridine(13) synthase TruD insig. 59 99
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3137.1 tRNA pseudouridine 13 synthase (EC 4.2.1.-) insig. 56 97
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3041 tRNA pseudouridine 13 synthase (EC 4.2.1.-) sig. 51 97
o Shewanella amazonensis SB2B Sama_1040 pseudouridylate synthase (RefSeq) sig. 48 99
o Pseudomonas fluorescens FW300-N2E3 AO353_16595 pseudouridine synthase sig. 51 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3111 tRNA pseudouridine 13 synthase (EC 4.2.1.-) insig. 51 97
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4679 tRNA pseudouridine 13 synthase (EC 4.2.1.-) sig. 50 97
o Pseudomonas fluorescens SBW25 PFLU_RS06410 tRNA pseudouridine(13) synthase TruD insig. 50 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS06410 tRNA pseudouridine(13) synthase TruD insig. 50 97
o Pseudomonas simiae WCS417 PS417_06345 pseudouridine synthase insig. 50 97
o Pseudomonas fluorescens FW300-N2C3 AO356_05905 pseudouridine synthase insig. 50 97
o Dickeya dadantii 3937 DDA3937_RS16890 tRNA pseudouridine(13) synthase TruD insig. 49 98
o Pseudomonas sp. RS175 PFR28_00423 tRNA pseudouridine synthase D insig. 49 97
o Dickeya dianthicola ME23 DZA65_RS18035 tRNA pseudouridine(13) synthase TruD insig. 49 98
o Dickeya dianthicola 67-19 HGI48_RS16960 tRNA pseudouridine(13) synthase TruD insig. 49 98
o Pseudomonas stutzeri RCH2 Psest_2811 Uncharacterized conserved protein insig. 49 98
o Shewanella loihica PV-4 Shew_1209 pseudouridylate synthase (RefSeq) sig. 47 98
o Shewanella sp. ANA-3 Shewana3_1120 tRNA pseudouridine synthase D, TruD (RefSeq) cofit 45 99
o Pseudomonas sp. S08-1 OH686_18165 tRNA pseudouridine(13) synthase cofit 50 97
o Shewanella oneidensis MR-1 SO3436 conserved hypothetical protein (NCBI ptt file) strong 45 99
o Pseudomonas syringae pv. syringae B728a Psyr_1370 tRNA pseudouridine synthase D, TruD insig. 49 97
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1370 tRNA pseudouridine synthase D, TruD insig. 49 97
o Serratia liquefaciens MT49 IAI46_03765 tRNA pseudouridine(13) synthase TruD insig. 46 97
o Alteromonas macleodii MIT1002 MIT1002_00629 tRNA pseudouridine synthase D insig. 41 98
o Pantoea sp. MT58 IAI47_04215 tRNA pseudouridine(13) synthase TruD insig. 45 98
o Rahnella sp. WP5 EX31_RS07845 tRNA pseudouridine(13) synthase TruD insig. 46 98
o Pectobacterium carotovorum WPP14 HER17_RS04335 tRNA pseudouridine(13) synthase TruD insig. 44 99
o Pseudomonas putida KT2440 PP_1619 tRNA pseudouridine synthase D insig. 48 95
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00988 tRNA pseudouridine synthase D insig. 45 99
o Escherichia coli BL21 ECD_02595 tRNA(Glu) pseudouridine(13) synthase insig. 45 99
o Escherichia coli ECRC62 BNILDI_10840 truD tRNA pseudouridine(13) synthase TruD insig. 45 99
o Escherichia coli BW25113 b2745 truD tRNA pseudouridine synthase D (NCBI) insig. 45 99
o Escherichia coli ECOR27 NOLOHH_12290 truD tRNA pseudouridine(13) synthase TruD insig. 45 99
o Escherichia coli ECOR38 HEPCGN_19655 truD tRNA pseudouridine(13) synthase TruD insig. 45 99
o Escherichia coli ECRC100 OKFHMN_20475 truD tRNA pseudouridine(13) synthase TruD insig. 44 99
o Escherichia coli ECRC101 MCAODC_11000 truD tRNA pseudouridine(13) synthase TruD cofit 44 99
o Escherichia coli ECRC102 NIAGMN_18245 truD tRNA pseudouridine(13) synthase TruD insig. 44 99
o Escherichia coli ECRC98 JDDGAC_24140 truD tRNA pseudouridine(13) synthase TruD cofit 44 99
o Escherichia coli ECRC99 KEDOAH_07665 truD tRNA pseudouridine(13) synthase TruD no data 44 99
o Escherichia coli Nissle 1917 ECOLIN_RS15350 tRNA pseudouridine(13) synthase TruD insig. 44 99
o Escherichia fergusonii Becca EFB2_01165 tRNA pseudouridine synthase D insig. 44 99
o Erwinia tracheiphila SCR3 LU632_RS06460 truD tRNA pseudouridine(13) synthase TruD insig. 44 97
o Klebsiella michiganensis M5al BWI76_RS22665 tRNA pseudouridine(13) synthase TruD insig. 44 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4793 tRNA pseudouridine 13 synthase (EC 4.2.1.-) insig. 43 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_02815 tRNA pseudouridine(13) synthase TruD insig. 43 97
o Enterobacter asburiae PDN3 EX28DRAFT_2841 tRNA pseudouridine synthase, TruD family insig. 43 99
o Kangiella aquimarina DSM 16071 B158DRAFT_2295 Uncharacterized conserved protein cofit 39 97
o Enterobacter sp. TBS_079 MPMX20_03631 tRNA pseudouridine synthase D insig. 43 99
o Marinobacter adhaerens HP15 HP15_1278 pseudouridylate synthase insig. 37 97
  Variovorax sp. SCN45 GFF8009 tRNA pseudouridine(13) synthase (EC 5.4.99.27) no data 55 47
  Methanococcus maripaludis S2 MMP_RS00100 tRNA pseudouridine(13) synthase TruD sig. 34 44
  Methanococcus maripaludis JJ MMJJ_RS05390 tRNA pseudouridine(13) synthase TruD insig. 33 44
  Methanococcus maripaludis JJ MMJJ_RS01835 tRNA pseudouridine(13) synthase TruD insig. 23 95
  Methanococcus maripaludis S2 MMP_RS03235 tRNA pseudouridine(13) synthase TruD sig. 23 95