| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Azospirillum sp. SherDot2 | MPMX19_06476 | | HTH-type transcriptional regulator ArgP | insig. | 100 | 100 |
| | Azospirillum sp. SherDot2 | MPMX19_05182 | | HTH-type transcriptional regulator HdfR | no data | 96 | 98 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS13110 | | LysR family transcriptional regulator | no data | 88 | 97 |
| | Rhizobium sp. OAE497 | ABIE40_RS16120 | | LysR substrate-binding domain-containing protein | no data | 49 | 97 |
| o | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS15435 | | LysR substrate-binding domain-containing protein | insig. | 50 | 96 |
| | Azospirillum sp. SherDot2 | MPMX19_05989 | | HTH-type transcriptional regulator HdfR | insig. | 47 | 96 |
| o | Rhodanobacter denitrificans MT42 | LRK55_RS15155 | | LysR substrate-binding domain-containing protein | insig. | 49 | 96 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS10935 | | LysR family transcriptional regulator | no data | 48 | 95 |
| | Serratia liquefaciens MT49 | IAI46_07280 | | LysR family transcriptional regulator | insig. | 47 | 94 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS07395 | | LysR family transcriptional regulator | cofit | 42 | 95 |
| | Pantoea sp. MT58 | IAI47_18925 | | LysR family transcriptional regulator | sig. | 42 | 95 |
| | Rahnella sp. WP5 | EX31_RS19850 | | LysR family transcriptional regulator | insig. | 40 | 89 |
| | Variovorax sp. SCN45 | GFF1864 | | Transcriptional regulator, LysR family | insig. | 45 | 95 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS13010 | | LysR substrate-binding domain-containing protein | insig. | 48 | 95 |
| | Variovorax sp. OAS795 | ABID97_RS22055 | | LysR substrate-binding domain-containing protein | insig. | 45 | 95 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_22495 | | LysR family transcriptional regulator | insig. | 44 | 87 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_22440 | | LysR family transcriptional regulator | insig. | 39 | 98 |
| | Caulobacter crescentus NA1000 | CCNA_03625 | | transcriptional regulator CztR | sig. | 42 | 98 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_03625 | | transcriptional regulator CztR | cofit | 42 | 98 |
| | Pseudomonas sp. SVBP6 | COO64_RS08665 | | LysR substrate-binding domain-containing protein | insig. | 40 | 93 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4223 | | Transcriptional regulator | insig. | 38 | 97 |
| | Klebsiella michiganensis M5al | BWI76_RS11345 | | LysR family transcriptional regulator | sig. | 41 | 82 |
| | Azospirillum sp. SherDot2 | MPMX19_05344 | | HTH-type transcriptional regulator YofA | insig. | 43 | 93 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_14455 | | LysR family transcriptional regulator | insig. | 40 | 90 |
| | Azospirillum sp. SherDot2 | MPMX19_00224 | | HTH-type transcriptional regulator GltC | insig. | 38 | 94 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS02765 | | LysR substrate-binding domain-containing protein | insig. | 40 | 90 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS32830 | | LysR substrate-binding domain-containing protein | insig. | 40 | 90 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS30590 | | LysR family transcriptional regulator | insig. | 39 | 96 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS10960 | | transcriptional regulator LrhA | insig. | 36 | 95 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS10960 | | transcriptional regulator LrhA | sig. | 36 | 95 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF3101 | | LysR family transcriptional regulator lrhA | insig. | 39 | 89 |
| | Azospirillum brasilense Sp245 | AZOBR_RS17225 | | LysR family transcriptional regulator | insig. | 39 | 93 |
| | Pseudomonas segetis P6 | ACVTMO_RS09435 | | LysR substrate-binding domain-containing protein | strong | 38 | 93 |
| | Azospirillum sp. SherDot2 | MPMX19_00088 | | HTH-type transcriptional regulator HdfR | insig. | 37 | 96 |
| | Pseudomonas stutzeri RCH2 | Psest_1630 | | Transcriptional regulator | insig. | 39 | 95 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_272 | | Transcriptional regulator, LysR family | insig. | 38 | 93 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS11285 | | LysR substrate-binding domain-containing protein | insig. | 37 | 91 |
| | Pseudomonas sp. DMC3 | GFF4607 | | HTH-type transcriptional regulator HdfR | cofit | 38 | 91 |
| | Variovorax sp. SCN45 | GFF1753 | | LysR family transcriptional regulator lrhA | insig. | 36 | 94 |
| | Pseudomonas putida KT2440 | PP_1863 | | Transcriptional regulator, LysR family | insig. | 37 | 93 |
| | Azospirillum brasilense Sp245 | AZOBR_RS00870 | | LysR family transcriptional regulator | insig. | 38 | 94 |
| | Pseudomonas sp. BP01 | JOY50_RS17025 | | LysR substrate-binding domain-containing protein | insig. | 37 | 93 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2241 | | Transcriptional regulator, LysR family | insig. | 37 | 93 |
| | Variovorax sp. OAS795 | ABID97_RS22410 | | LysR substrate-binding domain-containing protein | insig. | 37 | 94 |
| | Pseudomonas sp. SVBP6 | COO64_RS06030 | | LysR family transcriptional regulator | insig. | 42 | 76 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4421 | | LysR family transcriptional regulator lrhA | no data | 35 | 93 |
| | Sinorhizobium meliloti 1021 | SMc04163 | | transcriptional regulator | insig. | 37 | 90 |
| | Pseudomonas sp. S08-1 | OH686_22455 | | Transcriptional regulator, LysR family | insig. | 38 | 93 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1500 | | LysR family transcriptional regulator lrhA | insig. | 34 | 93 |
| | Rhodopseudomonas palustris CGA009 | TX73_013870 | | LysR substrate-binding domain-containing protein | insig. | 35 | 92 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3624 | | transcriptional regulator, LysR family | insig. | 36 | 90 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3624 | | transcriptional regulator, LysR family | insig. | 36 | 90 |
| | Dechlorosoma suillum PS | Dsui_1371 | | transcriptional regulator | insig. | 41 | 97 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_23985 | | LysR family transcriptional regulator | insig. | 34 | 92 |
| | Pseudomonas stutzeri RCH2 | Psest_3087 | | Transcriptional regulator | sig. | 39 | 87 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS30705 | | LysR family transcriptional regulator | insig. | 38 | 87 |
| | Rhodopseudomonas palustris CGA009 | TX73_004170 | | LysR substrate-binding domain-containing protein | insig. | 36 | 94 |
| | Pectobacterium carotovorum WPP14 | HER17_RS07120 | | transcriptional regulator LrhA | cofit | 33 | 92 |
| | Agrobacterium fabrum C58 | Atu0654 | | transcriptional regulator, LysR family | strong | 33 | 92 |
| | Xanthobacter sp. DMC5 | GFF1272 | | HTH-type transcriptional regulator YofA | insig. | 40 | 76 |
| | Pseudomonas sp. DMC3 | GFF1347 | | HTH-type transcriptional regulator HdfR | cofit | 40 | 86 |
| | Pseudomonas simiae WCS417 | PS417_08510 | | LysR family transcriptional regulator | sig. | 37 | 93 |
| | Rhizobium sp. OAE497 | ABIE40_RS03500 | | LysR substrate-binding domain-containing protein | strong | 35 | 87 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_19100 | | LysR family transcriptional regulator | insig. | 36 | 91 |
| | Alteromonas macleodii MIT1002 | MIT1002_00554 | | HTH-type transcriptional regulator YofA | insig. | 31 | 93 |
| | Pseudomonas sp. SVBP6 | COO64_RS08550 | | LysR substrate-binding domain-containing protein | insig. | 35 | 94 |
| | Dickeya dadantii 3937 | DDA3937_RS14340 | | transcriptional regulator LrhA | sig. | 33 | 89 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2456 | | Transcriptional regulator, LysR family | strong | 37 | 91 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_03135 | | LysR family transcriptional regulator | cofit | 36 | 91 |
| | Rhizobium sp. OAE497 | ABIE40_RS11195 | | LysR family transcriptional regulator | insig. | 36 | 89 |
| | Sinorhizobium meliloti 1021 | SMc00820 | | transcriptional regulator | sig. | 33 | 94 |
| | Pseudomonas sp. RS175 | PFR28_00975 | | HTH-type transcriptional regulator HdfR | strong | 37 | 93 |
| | Xanthobacter sp. DMC5 | GFF3932 | | HTH-type transcriptional regulator HdfR | no data | 38 | 92 |
| | Pseudomonas putida KT2440 | PP_3534 | | Transcriptional regulator, LysR family | insig. | 35 | 96 |
| | Variovorax sp. SCN45 | GFF5707 | | Transcriptional regulator, LysR family | insig. | 40 | 86 |
| | Sphingobium sp. HT1-2 | GFF3633 | | Transcriptional regulator, LysR family | cofit | 37 | 95 |
| | Pseudomonas orientalis W4I3 | QF045_RS11230 | | LysR family transcriptional regulator | insig. | 37 | 91 |
| | Xanthobacter sp. DMC5 | GFF2076 | | hypothetical protein | insig. | 36 | 93 |
| | Pseudomonas sp. BP01 | JOY50_RS27450 | | LysR substrate-binding domain-containing protein | insig. | 35 | 96 |
| | Serratia liquefaciens MT49 | IAI46_17715 | | transcriptional regulator LrhA | cofit | 34 | 89 |
| | Dickeya dianthicola 67-19 | HGI48_RS14315 | | transcriptional regulator LrhA | sig. | 33 | 89 |
| | Dickeya dianthicola ME23 | DZA65_RS14990 | | transcriptional regulator LrhA | sig. | 33 | 89 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS08460 | | LysR family transcriptional regulator | insig. | 37 | 91 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS08460 | | LysR family transcriptional regulator | insig. | 37 | 91 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS11840 | | LysR family transcriptional regulator | insig. | 35 | 90 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS10150 | | LysR family transcriptional regulator | insig. | 37 | 86 |
| | Bosea sp. OAE506 | ABIE41_RS23080 | | LysR substrate-binding domain-containing protein | insig. | 39 | 76 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS05230 | | LysR family transcriptional regulator | insig. | 39 | 84 |
| | Erwinia amylovora T8 | OLJFJH_11405 | | transcriptional regulator LrhA | no data | 34 | 89 |
| | Paraburkholderia graminis OAS925 | ABIE53_005380 | | DNA-binding transcriptional LysR family regulator | insig. | 39 | 76 |
| | Bosea sp. OAE506 | ABIE41_RS06340 | | LysR family transcriptional regulator | insig. | 35 | 89 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01834 | | HTH-type transcriptional regulator HdfR | cofit | 36 | 91 |
| | Klebsiella michiganensis M5al | BWI76_RS20200 | | transcriptional regulator LrhA | insig. | 38 | 76 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS32260 | | LysR substrate-binding domain-containing protein | insig. | 34 | 92 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS17870 | | LysR family transcriptional regulator | insig. | 34 | 90 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS20860 | | LysR family transcriptional regulator | insig. | 33 | 95 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS20860 | | LysR family transcriptional regulator | sig. | 33 | 95 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3000 | | Transcriptional regulator | insig. | 37 | 93 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS23685 | | LysR substrate-binding domain-containing protein | insig. | 36 | 93 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_05275 | | LysR family transcriptional regulator | insig. | 36 | 92 |