| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Azospirillum sp. SherDot2 | MPMX19_05638 | | Aerobic respiration control protein ArcA | insig. | 100 | 100 |
| | Azospirillum sp. SherDot2 | MPMX19_00963 | | Transcriptional regulatory protein OmpR | insig. | 40 | 89 |
| | Azospirillum brasilense Sp245 | AZOBR_RS09200 | | response regulator | no data | 40 | 86 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS04320 | | DNA-binding response regulator | insig. | 40 | 87 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS17435 | | DNA-binding response regulator | cofit | 37 | 87 |
| | Azospirillum sp. SherDot2 | MPMX19_04870 | | Transcriptional regulatory protein OmpR | insig. | 36 | 87 |
| o | Variovorax sp. SCN45 | GFF4954 | | no description | insig. | 39 | 85 |
| | Variovorax sp. SCN45 | GFF6215 | | no description | insig. | 38 | 86 |
| | Pseudomonas sp. BP01 | JOY50_RS08135 | | response regulator | insig. | 37 | 88 |
| | Pseudomonas sp. SVBP6 | COO64_RS21035 | | response regulator | insig. | 37 | 88 |
| | Pseudomonas putida KT2440 | PP_3730 | | Transcriptional regulatory protein AruR | insig. | 36 | 88 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_24810 | | transcriptional regulator | insig. | 37 | 87 |
| | Sphingobium sp. HT1-2 | GFF511 | | DNA-binding response regulator | cofit | 36 | 87 |
| | Azospirillum sp. SherDot2 | MPMX19_05849 | | TorCAD operon transcriptional regulatory protein TorR | insig. | 35 | 88 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS00510 | | transcriptional regulator | insig. | 35 | 86 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3214 | | probable two-component response regulator | insig. | 36 | 88 |
| | Klebsiella michiganensis M5al | BWI76_RS19165 | | chemotaxis protein CheY | insig. | 34 | 85 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_28620 | | Transcriptional regulatory protein AruR | insig. | 35 | 88 |
| | Variovorax sp. SCN45 | GFF6945 | | Two-component transcriptional response regulator, OmpR family | sig. | 33 | 87 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_1185 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | insig. | 35 | 86 |
| | Sphingobium sp. HT1-2 | GFF4627 | | hypothetical protein | insig. | 35 | 90 |
| | Sphingobium sp. HT1-2 | GFF2506 | | Two-component transcriptional response regulator, OmpR family | cofit | 33 | 87 |
| | Xanthobacter sp. DMC5 | GFF2161 | | Transcriptional regulatory protein OmpR | insig. | 36 | 87 |
| | Lysobacter sp. OAE881 | ABIE51_RS11155 | | response regulator | insig. | 35 | 88 |
| | Enterobacter sp. TBS_079 | MPMX20_02281 | | Transcriptional regulatory protein OmpR | insig. | 35 | 86 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS21900 | | transcriptional regulator | insig. | 34 | 87 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS13230 | | DNA-binding response regulator | insig. | 34 | 90 |
| | Rhodospirillum rubrum S1H | Rru_A1282 | | Two component Transcriptional regulator, Winged helix family (NCBI) | insig. | 33 | 92 |
| | Sphingobium sp. HT1-2 | GFF2502 | | Two-component transcriptional response regulator, OmpR family | cofit | 35 | 87 |
| | Pseudomonas sp. BP01 | JOY50_RS26375 | | response regulator | insig. | 34 | 85 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS31170 | | response regulator transcription factor | insig. | 35 | 87 |
| | Pseudomonas putida KT2440 | PP_0271 | | DNA-binding response regulator | insig. | 33 | 88 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_22510 | | DNA-binding response regulator | insig. | 34 | 86 |
| | Rhodopseudomonas palustris CGA009 | TX73_018505 | | response regulator | insig. | 36 | 87 |
| | Azospirillum brasilense Sp245 | AZOBR_RS00555 | | chemotaxis protein CheY | insig. | 36 | 87 |
| | Azospirillum sp. SherDot2 | MPMX19_04053 | | Transcriptional regulatory protein OmpR | insig. | 35 | 88 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2032 | | two component transcriptional regulator, winged helix family | insig. | 35 | 90 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2032 | | two component transcriptional regulator, winged helix family | insig. | 35 | 90 |
| | Variovorax sp. OAS795 | ABID97_RS16175 | | response regulator transcription factor | insig. | 32 | 87 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS17815 | | response regulator | insig. | 35 | 89 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS17815 | | response regulator | sig. | 35 | 89 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4300 | | Transcriptional regulatory protein ompR | no data | 35 | 89 |
| | Pseudomonas simiae WCS417 | PS417_09050 | | transcriptional regulator | insig. | 35 | 92 |
| | Shewanella loihica PV-4 | Shew_2803 | | DNA-binding transcriptional regulator TorR (RefSeq) | insig. | 30 | 88 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS17755 | | response regulator transcription factor | insig. | 34 | 88 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS17755 | | response regulator transcription factor | insig. | 34 | 88 |
| | Klebsiella michiganensis M5al | BWI76_RS04230 | | DNA-binding response regulator | no data | 32 | 88 |
| | Pseudomonas sp. RS175 | PFR28_01763 | | Transcriptional regulatory protein OmpR | insig. | 36 | 86 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS09105 | | response regulator transcription factor | insig. | 35 | 92 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS09105 | | response regulator transcription factor | insig. | 35 | 92 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_24850 | | chemotaxis protein CheY | insig. | 36 | 86 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_659 | | Transcriptional regulatory protein ompR | insig. | 36 | 86 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_0557 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | insig. | 34 | 87 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_12495 | | two-component system response regulator ArcA | no data | 31 | 88 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03050 | | Transcriptional regulatory protein OmpR | cofit | 34 | 89 |
| | Pseudomonas sp. RS175 | PFR28_03065 | | Transcriptional regulatory protein OmpR | insig. | 36 | 86 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS02865 | | response regulator transcription factor | insig. | 35 | 85 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS03105 | | response regulator transcription factor | insig. | 33 | 87 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1631 | | two component transcriptional regulator, winged helix family (RefSeq) | insig. | 36 | 89 |
| | Sphingobium sp. HT1-2 | GFF3699 | | DNA-binding response regulator GltR, controls specific porins for the entry of glucose | cofit | 34 | 88 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_26280 | | DNA-binding response regulator | insig. | 31 | 85 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_12000 | | two-component system response regulator ArcA | no data | 31 | 86 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_08645 | | two-component system response regulator TorR | insig. | 31 | 86 |
| | Pseudomonas segetis P6 | MPMX49_00732 | | Transcriptional regulatory protein CreB | insig. | 31 | 87 |
| | Pseudomonas sp. DMC3 | GFF1652 | | Transcriptional regulatory protein OmpR | no data | 35 | 88 |
| | Pantoea sp. MT58 | IAI47_19355 | | response regulator | insig. | 35 | 86 |
| | Pseudomonas sp. BP01 | JOY50_RS10570 | | response regulator | insig. | 34 | 89 |
| | Pseudomonas putida KT2440 | PP_2403 | | Chemotaxis protein CheY | insig. | 34 | 89 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_0871 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | insig. | 34 | 87 |
| | Dinoroseobacter shibae DFL-12 | Dshi_3772 | | two component transcriptional regulator, winged helix family (RefSeq) | no data | 33 | 87 |
| | Dinoroseobacter shibae DFL-12 | Dshi_4048 | | two component transcriptional regulator, winged helix family (RefSeq) | no data | 33 | 87 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3611 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | insig. | 31 | 88 |
| | Enterobacter sp. TBS_079 | MPMX20_00708 | | Aerobic respiration control protein ArcA | strong | 31 | 88 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_515 | | DNA-binding response regulator GltR, controls specific porins for the entry of glucose | insig. | 36 | 86 |
| | Dinoroseobacter shibae DFL-12 | Dshi_2497 | | two component transcriptional regulator, winged helix family (RefSeq) | insig. | 36 | 87 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4737 | | Two-component response regulator CreB | insig. | 32 | 93 |
| | Escherichia coli BL21 | ECD_04277 | | response regulator in two-component regulatory system with ArcB or CpxA | no data | 31 | 86 |
| | Escherichia fergusonii Becca | EFB2_04043 | | Aerobic respiration control protein ArcA | no data | 31 | 86 |
| | Escherichia coli ECOR27 | NOLOHH_03455 | arcA | two-component system response regulator ArcA | no data | 31 | 86 |
| | Escherichia coli ECOR38 | HEPCGN_09130 | arcA | two-component system response regulator ArcA | no data | 31 | 86 |
| | Escherichia coli ECRC100 | OKFHMN_11125 | arcA | two-component system response regulator ArcA | no data | 31 | 86 |
| | Escherichia coli ECRC101 | MCAODC_01640 | arcA | two-component system response regulator ArcA | no data | 31 | 86 |
| | Escherichia coli ECRC102 | NIAGMN_08975 | arcA | two-component system response regulator ArcA | no data | 31 | 86 |
| | Escherichia coli ECRC62 | BNILDI_08145 | arcA | two-component system response regulator ArcA | no data | 31 | 86 |
| | Escherichia coli ECRC98 | JDDGAC_14720 | arcA | two-component system response regulator ArcA | no data | 31 | 86 |
| | Escherichia coli ECRC99 | KEDOAH_17030 | arcA | two-component system response regulator ArcA | no data | 31 | 86 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03660 | | Aerobic respiration control protein ArcA | no data | 31 | 86 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS25255 | | two-component system response regulator ArcA | no data | 31 | 86 |
| | Escherichia coli BW25113 | b4401 | arcA | DNA-binding response regulator in two-component regulatory system with ArcB or CpxA (NCBI) | no data | 31 | 86 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1076 | | Aerobic respiration control protein arcA | strong | 31 | 86 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_19845 | | transcriptional regulator | insig. | 36 | 86 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5886 | | DNA-binding response regulator GltR, controls specific porins for the entry of glucose | insig. | 34 | 86 |
| | Pseudomonas sp. SVBP6 | COO64_RS10890 | | response regulator | insig. | 34 | 86 |
| | Lysobacter sp. OAE881 | ABIE51_RS14390 | | response regulator | insig. | 33 | 86 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_07595 | | transcriptional regulator | insig. | 32 | 86 |
| | Serratia liquefaciens MT49 | IAI46_03015 | | two-component system response regulator ArcA | strong | 30 | 88 |
| | Pantoea sp. MT58 | IAI47_16230 | | two-component system response regulator ArcA | no data | 29 | 88 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_01675 | | transcriptional regulator | insig. | 35 | 93 |
| | Pseudomonas simiae WCS417 | PS417_16000 | | chemotaxis protein CheY | insig. | 34 | 89 |
| | Rahnella sp. WP5 | EX31_RS03955 | | two-component system response regulator ArcA | strong | 30 | 86 |