Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Azospirillum sp. SherDot2 | MPMX19_03117 | | Catabolite control protein A | insig. | 100 | 100 |
o | Phaeobacter inhibens DSM 17395 | PGA1_c27400 | | transcriptional regulator, lacI family | sig. | 41 | 98 |
o | Dickeya dianthicola ME23 | DZA65_RS04485 | | substrate-binding domain-containing protein | insig. | 40 | 97 |
o | Dickeya dadantii 3937 | DDA3937_RS04605 | | LacI family DNA-binding transcriptional regulator | insig. | 40 | 97 |
| Azospirillum sp. SherDot2 | MPMX19_03262 | | putative HTH-type transcriptional repressor ExuR | insig. | 42 | 97 |
o | Dickeya dianthicola 67-19 | HGI48_RS04560 | | LacI family DNA-binding transcriptional regulator | insig. | 40 | 97 |
o | Dinoroseobacter shibae DFL-12 | Dshi_2238 | | transcriptional regulator, LacI family (RefSeq) | insig. | 39 | 99 |
| Phaeobacter inhibens DSM 17395 | PGA1_c07290 | | transcriptional regulator, lacI family | strong | 40 | 97 |
| Dinoroseobacter shibae DFL-12 | Dshi_1273 | | transcriptional regulator, LacI family (RefSeq) | insig. | 40 | 97 |
| Phaeobacter inhibens DSM 17395 | PGA1_c02700 | | putative HTH-type transcriptional regulator | strong | 39 | 93 |
o | Serratia liquefaciens MT49 | IAI46_15365 | | LacI family DNA-binding transcriptional regulator | insig. | 36 | 98 |
o | Rhizobium sp. OAE497 | ABIE40_RS20090 | | LacI family DNA-binding transcriptional regulator | insig. | 38 | 98 |
o | Klebsiella michiganensis M5al | BWI76_RS07845 | | LacI family transcriptional regulator | strong | 37 | 99 |
o | Vibrio cholerae E7946 ATCC 55056 | CSW01_17555 | | LacI family transcriptional regulator | insig. | 32 | 99 |
| Dinoroseobacter shibae DFL-12 | Dshi_3140 | | transcriptional regulator, LacI family (RefSeq) | insig. | 38 | 98 |
| Rhizobium sp. OAE497 | ABIE40_RS17165 | | LacI family DNA-binding transcriptional regulator | strong | 36 | 93 |
o | Pectobacterium carotovorum WPP14 | HER17_RS00940 | | LacI family DNA-binding transcriptional regulator | insig. | 37 | 99 |
o | Pantoea sp. MT58 | IAI47_09870 | | LacI family DNA-binding transcriptional regulator | insig. | 36 | 92 |
| Rhizobium sp. OAE497 | ABIE40_RS20655 | | substrate-binding domain-containing protein | strong | 38 | 87 |
| Serratia liquefaciens MT49 | IAI46_16650 | | LacI family DNA-binding transcriptional regulator | insig. | 37 | 97 |
o | Sinorhizobium meliloti 1021 | SM_b20154 | | transcriptional regulator | sig. | 37 | 99 |
| Sinorhizobium meliloti 1021 | SM_b20366 | | LacI family transcriptional regulator | insig. | 36 | 97 |
o | Paraburkholderia sabiae LMG 24235 | QEN71_RS35720 | | LacI family DNA-binding transcriptional regulator | strong | 38 | 97 |
o | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS02445 | | LacI family transcriptional regulator | sig. | 38 | 97 |
o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS14885 | | LacI family DNA-binding transcriptional regulator | strong | 40 | 97 |
o | Rhodanobacter denitrificans MT42 | LRK55_RS08435 | | LacI family DNA-binding transcriptional regulator | cofit | 38 | 93 |
o | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS08670 | | LacI family transcriptional regulator | strong | 38 | 93 |
o | Shewanella amazonensis SB2B | Sama_1400 | | periplasmic binding protein/LacI transcriptional regulator (RefSeq) | strong | 35 | 97 |
| Dickeya dadantii 3937 | DDA3937_RS00055 | | ribose operon transcriptional repressor RbsR | strong | 35 | 96 |
| Pectobacterium carotovorum WPP14 | HER17_RS00040 | | LacI family DNA-binding transcriptional regulator | cofit | 33 | 97 |
o | Lysobacter sp. OAE881 | ABIE51_RS08800 | | LacI family DNA-binding transcriptional regulator | sig. | 39 | 87 |
o | Rhodanobacter sp. FW510-T8 | OKGIIK_15435 | | LacI family transcriptional regulator | insig. | 36 | 89 |
o | Alteromonas macleodii MIT1002 | MIT1002_03843 | | Galactose operon repressor | strong | 32 | 97 |
| Dickeya dianthicola 67-19 | HGI48_RS21310 | | ribose operon transcriptional repressor RbsR | strong | 34 | 95 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS09955 | | LacI family DNA-binding transcriptional regulator | strong | 37 | 90 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS14240 | | LacI family transcriptional regulator | strong | 36 | 97 |
| Ralstonia solanacearum UW163 | UW163_RS11705 | | LacI family transcriptional regulator | insig. | 36 | 97 |
o | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS03600 | | LacI family DNA-binding transcriptional regulator | insig. | 39 | 88 |
| Ralstonia solanacearum PSI07 | RPSI07_RS19225 | | LacI family transcriptional regulator | insig. | 36 | 97 |
| Ralstonia solanacearum GMI1000 | RS_RS05020 | | LacI family transcriptional regulator | sig. | 36 | 97 |
o | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.5254.1 | | Transcriptional regulator, LacI family | sig. | 40 | 85 |
o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1322 | | Galactose operon repressor, GalR-LacI family of transcriptional regulators | insig. | 36 | 93 |
| Pectobacterium carotovorum WPP14 | HER17_RS21525 | | ribose operon transcriptional repressor RbsR | strong | 32 | 97 |
| Alteromonas macleodii MIT1002 | MIT1002_04103 | | Galactose operon repressor | strong | 34 | 97 |
| Enterobacter asburiae PDN3 | EX28DRAFT_4029 | | transcriptional regulator, LacI family | strong | 32 | 96 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2362.1 | | Transcriptional regulator, LacI family | insig. | 37 | 91 |
| Serratia liquefaciens MT49 | IAI46_17055 | | LacI family DNA-binding transcriptional regulator | insig. | 34 | 88 |
| Klebsiella michiganensis M5al | BWI76_RS23355 | | LacI family transcriptional regulator | strong | 33 | 89 |
o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_1890 | | transcriptional regulator, LacI family | insig. | 37 | 91 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS01690 | | LacI family DNA-binding transcriptional regulator | insig. | 34 | 98 |
| Klebsiella michiganensis M5al | BWI76_RS05680 | | LacI family transcriptional regulator | strong | 33 | 91 |
| Escherichia coli BL21 | ECD_03639 | | transcriptional repressor of ribose metabolism | insig. | 32 | 97 |
| Escherichia fergusonii Becca | EFB2_04880 | | Ribose operon repressor | cofit | 32 | 97 |
| Escherichia coli ECOR27 | NOLOHH_06860 | rbsR | ribose operon transcriptional repressor RbsR | cofit | 32 | 97 |
| Escherichia coli ECOR38 | HEPCGN_13435 | rbsR | ribose operon transcriptional repressor RbsR | cofit | 32 | 97 |
| Escherichia coli ECRC100 | OKFHMN_14725 | rbsR | ribose operon transcriptional repressor RbsR | cofit | 32 | 97 |
| Escherichia coli ECRC101 | MCAODC_05230 | rbsR | ribose operon transcriptional repressor RbsR | cofit | 32 | 97 |
| Escherichia coli ECRC102 | NIAGMN_12480 | rbsR | ribose operon transcriptional repressor RbsR | sig. | 32 | 97 |
| Escherichia coli ECRC62 | BNILDI_04665 | rbsR | ribose operon transcriptional repressor RbsR | cofit | 32 | 97 |
| Escherichia coli ECRC98 | JDDGAC_18345 | rbsR | ribose operon transcriptional repressor RbsR | cofit | 32 | 97 |
| Escherichia coli ECRC99 | KEDOAH_13425 | rbsR | ribose operon transcriptional repressor RbsR | no data | 32 | 97 |
| Escherichia coli BW25113 | b3753 | rbsR | DNA-binding transcriptional repressor of ribose metabolism (NCBI) | strong | 32 | 97 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_14670 | | transcriptional repressor PurR | insig. | 31 | 98 |
| Dickeya dianthicola ME23 | DZA65_RS22290 | | substrate-binding domain-containing protein | cofit | 33 | 96 |
o | Caulobacter crescentus NA1000 | CCNA_01556 | | LacI-family transcriptional regulator | strong | 36 | 99 |
o | Caulobacter crescentus NA1000 Δfur | CCNA_01556 | | LacI-family transcriptional regulator | insig. | 36 | 99 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS11495 | | LacI family transcription regulator | strong | 33 | 97 |
| Pseudomonas syringae pv. syringae B728a | Psyr_2154 | | transcriptional regulator, LacI family | sig. | 33 | 97 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2154 | | transcriptional regulator, LacI family | insig. | 33 | 97 |
| Pseudomonas fluorescens SBW25 | PFLU_RS20365 | | LacI family DNA-binding transcriptional regulator | insig. | 33 | 97 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS20365 | | LacI family DNA-binding transcriptional regulator | sig. | 33 | 97 |
| Rahnella sp. WP5 | EX31_RS06195 | | ribose operon transcriptional repressor RbsR | cofit | 32 | 97 |
| Enterobacter sp. TBS_079 | MPMX20_04614 | | Ribose operon repressor | strong | 32 | 96 |
| Rhizobium sp. OAE497 | ABIE40_RS20750 | | LacI family DNA-binding transcriptional regulator | sig. | 33 | 91 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0698 | | Transcriptional regulators | strong | 28 | 99 |
| Sinorhizobium meliloti 1021 | SM_b20014 | | transcriptional regulator | insig. | 33 | 96 |
| Lysobacter sp. OAE881 | ABIE51_RS01590 | | LacI family DNA-binding transcriptional regulator | sig. | 36 | 98 |
| Pseudomonas simiae WCS417 | PS417_18390 | | LacI family transcriptional regulator | strong | 32 | 97 |
| Pseudomonas sp. DMC3 | GFF1074 | | HTH-type transcriptional repressor CytR | insig. | 34 | 97 |
| Sinorhizobium meliloti 1021 | SM_b20674 | | LacI family transcriptional regulator | insig. | 32 | 92 |
| Pseudomonas putida KT2440 | PP_2457 | | DNA-binding transcriptional repressor | strong | 32 | 92 |
o | Xanthobacter sp. DMC5 | GFF1559 | | HTH-type transcriptional repressor CytR | insig. | 35 | 99 |
| Erwinia tracheiphila SCR3 | LU632_RS11190 | purR | HTH-type transcriptional repressor PurR | insig. | 31 | 97 |
o | Pseudomonas sp. BP01 | JOY50_RS07795 | | LacI family DNA-binding transcriptional regulator | no data | 36 | 84 |
| Pectobacterium carotovorum WPP14 | HER17_RS03725 | | LacI family DNA-binding transcriptional regulator | insig. | 32 | 93 |
| Pseudomonas sp. BP01 | JOY50_RS04285 | | LacI family DNA-binding transcriptional regulator | insig. | 32 | 92 |
| Sphingomonas koreensis DSMZ 15582 | Ga0059261_1462 | | Transcriptional regulators | insig. | 37 | 87 |
| Enterobacter asburiae PDN3 | EX28DRAFT_2509 | | transcriptional regulator, LacI family | insig. | 35 | 87 |
| Enterobacter asburiae PDN3 | EX28DRAFT_2915 | | Transcriptional regulators | insig. | 33 | 89 |
| Erwinia tracheiphila SCR3 | LU632_RS06045 | galR | HTH-type transcriptional regulator GalR | strong | 32 | 97 |
| Escherichia coli Nissle 1917 | ECOLIN_RS21575 | | ribose operon transcriptional repressor RbsR | insig. | 32 | 92 |
| Enterobacter asburiae PDN3 | EX28DRAFT_2805 | | Transcriptional regulators | insig. | 31 | 89 |
| Pseudomonas aeruginosa PA14 | IKLFDK_09515 | | LacI family transcriptional regulator | insig. | 31 | 97 |
| Rahnella sp. WP5 | EX31_RS13830 | | HTH-type transcriptional repressor PurR | insig. | 31 | 97 |
| Dickeya dianthicola 67-19 | HGI48_RS12685 | | HTH-type transcriptional repressor PurR | sig. | 31 | 97 |
| Dickeya dianthicola ME23 | DZA65_RS13140 | | HTH-type transcriptional repressor PurR | insig. | 31 | 97 |
| Klebsiella michiganensis M5al | BWI76_RS14595 | | cytochrome-c peroxidase | insig. | 30 | 99 |
| Dickeya dadantii 3937 | DDA3937_RS17375 | | HTH-type transcriptional regulator GalR | insig. | 33 | 97 |
| Enterobacter sp. TBS_079 | MPMX20_03704 | | HTH-type transcriptional regulator AscG | insig. | 32 | 89 |
| Pantoea sp. MT58 | IAI47_16915 | | HTH-type transcriptional regulator GalR | sig. | 32 | 97 |