Homologs of HSERO_RS19060 from Herbaspirillum seropedicae SmR1

ABC transporter permease
SEED: Predicted gluconate TRAP family transporter, DctM subunit

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Herbaspirillum seropedicae SmR1 HSERO_RS19060 ABC transporter permease insig. 100 100
  Burkholderia phytofirmans PsJN BPHYT_RS30450 ABC transporter permease insig. 60 97
  Azospirillum brasilense Sp245 AZOBR_RS26430 ABC transporter permease insig. 61 96
  Azospirillum sp. SherDot2 MPMX19_02971 Sialic acid TRAP transporter permease protein SiaT insig. 59 92
  Paraburkholderia sabiae LMG 24235 QEN71_RS16020 TRAP transporter large permease subunit insig. 56 97
  Rhodopseudomonas palustris CGA009 TX73_014405 TRAP transporter large permease subunit insig. 61 93
  Variovorax sp. SCN45 GFF1452 Predicted gluconate TRAP family transporter, DctM subunit insig. 58 98
  Azospirillum sp. SherDot2 MPMX19_04771 Sialic acid TRAP transporter permease protein SiaT insig. 60 97
  Variovorax sp. OAS795 ABID97_RS11780 TRAP transporter large permease subunit insig. 58 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03358 TRAP transporter, DctM subunit insig. 59 92
  Paraburkholderia graminis OAS925 ABIE53_005306 tripartite ATP-independent transporter DctM subunit insig. 56 97
  Burkholderia phytofirmans PsJN BPHYT_RS35765 ABC transporter permease insig. 56 97
  Herbaspirillum seropedicae SmR1 HSERO_RS05555 ABC transporter permease insig. 59 94
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03762 TRAP transporter, DctM subunit insig. 56 97
  Azospirillum sp. SherDot2 MPMX19_03905 Sialic acid TRAP transporter permease protein SiaT insig. 58 97
  Variovorax sp. SCN45 GFF5681 Predicted gluconate TRAP family transporter, DctM subunit insig. 59 92
  Bosea sp. OAE506 ABIE41_RS09180 TRAP transporter large permease subunit insig. 52 92
  Bosea sp. OAE506 ABIE41_RS20750 TRAP transporter large permease subunit insig. 50 96
  Sinorhizobium meliloti 1021 SMc00266 transmembrane protein insig. 50 96
  Agrobacterium fabrum C58 Atu4827 ABC transporter permease insig. 50 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01744 TRAP transporter, DctM subunit insig. 33 97
  Cupriavidus basilensis FW507-4G11 RR42_RS10605 C4-dicarboxylate ABC transporter permease insig. 32 92
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05541 TRAP transporter, DctM subunit insig. 33 93
  Variovorax sp. SCN45 GFF1397 TRAP-type C4-dicarboxylate transport system, large permease component insig. 32 86
  Serratia liquefaciens MT49 IAI46_00370 TRAP transporter large permease subunit insig. 32 91
  Bosea sp. OAE506 ABIE41_RS07820 TRAP transporter large permease insig. 33 65
  Desulfovibrio vulgaris Miyazaki F DvMF_1931 TRAP dicarboxylate transporter, DctM subunit (RefSeq) insig. 28 90
  Sinorhizobium meliloti 1021 SM_b21436 C4-dicarboxylate transport system, permease large protein transmembrane insig. 31 64
  Alteromonas macleodii MIT1002 MIT1002_02428 Neu5Ac permease insig. 32 67
  Agrobacterium fabrum C58 Atu3135 ABC transporter permease strong 31 65
  Azospirillum brasilense Sp245 AZOBR_RS26625 dehydroascorbate transporter insig. 31 67
  Variovorax sp. SCN45 GFF6470 TRAP-type C4-dicarboxylate transport system, large permease component insig. 30 65
  Caulobacter crescentus NA1000 CCNA_01515 C4-dicarboxylate transporter large subunit sig. 30 65
  Caulobacter crescentus NA1000 Δfur CCNA_01515 C4-dicarboxylate transporter large subunit cofit 30 65
  Bosea sp. OAE506 ABIE41_RS03210 TRAP transporter large permease insig. 32 60
  Desulfovibrio vulgaris Hildenborough JW710 DVU2823 dctM TRAP dicarboxylate transporter family protein (TIGR) insig. 27 91
  Escherichia coli ECOR27 NOLOHH_11090 dctQ Tripartite ATP-independent periplasmic transporter, DctM component cofit 30 67
  Acidovorax sp. GW101-3H11 Ac3H11_163 TRAP-type C4-dicarboxylate transport system, large permease component insig. 30 65
  Azospirillum brasilense Sp245 AZOBR_RS09595 C4-dicarboxylate ABC transporter permease sig. 28 64
  Enterobacter sp. TBS_079 MPMX20_04347 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 29 66
  Bosea sp. OAE506 ABIE41_RS18670 TRAP transporter large permease insig. 31 66
  Klebsiella michiganensis M5al BWI76_RS24135 c4-dicarboxylate permease insig. 30 65
  Sinorhizobium meliloti 1021 SM_b21351 C4-dicarboxylate large membrane transport protein insig. 32 65
  Acidovorax sp. GW101-3H11 Ac3H11_1228 TRAP-type C4-dicarboxylate transport system, large permease component insig. 33 64
  Magnetospirillum magneticum AMB-1 AMB_RS04550 C4-dicarboxylate ABC transporter permease insig. 29 67
  Desulfovibrio vulgaris Miyazaki F DvMF_2137 TRAP dicarboxylate transporter, DctM subunit (RefSeq) cofit 34 59
  Acidovorax sp. GW101-3H11 Ac3H11_4175 TRAP-type C4-dicarboxylate transport system, large permease component insig. 29 60
  Azospirillum sp. SherDot2 MPMX19_06063 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 28 65
  Castellaniella sp019104865 MT123 ABCV34_RS13670 TRAP transporter large permease subunit insig. 31 60
  Variovorax sp. OAS795 ABID97_RS19635 TRAP transporter large permease insig. 29 65
  Bosea sp. OAE506 ABIE41_RS24150 TRAP transporter large permease subunit insig. 31 67
  Escherichia coli Nissle 1917 ECOLIN_RS17390 TRAP transporter large permease subunit insig. 31 65
  Rahnella sp. WP5 EX31_RS08020 TRAP transporter large permease insig. 28 66
  Agrobacterium fabrum C58 Atu3156 ABC transporter permease insig. 29 65
  Agrobacterium fabrum C58 Atu2743 hypothetical protein insig. 31 66
  Pectobacterium carotovorum WPP14 HER17_RS19685 TRAP transporter large permease cofit 28 66
  Sinorhizobium meliloti 1021 SMa0250 dedA-like protein insig. 30 67
  Acidovorax sp. GW101-3H11 Ac3H11_3955 TRAP-type C4-dicarboxylate transport system, large permease component insig. 32 67
  Variovorax sp. OAS795 ABID97_RS10330 TRAP transporter large permease strong 31 64
  Pseudomonas fluorescens FW300-N2C3 AO356_25640 L-dehydroascorbate transporter large permease subunit insig. 29 67
  Variovorax sp. SCN45 GFF1516 TRAP-type C4-dicarboxylate transport system, large permease component insig. 33 66
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03837 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 31 65
  Dechlorosoma suillum PS Dsui_3153 TRAP transporter, DctM subunit sig. 27 65
  Castellaniella sp019104865 MT123 ABCV34_RS11535 TRAP transporter large permease subunit insig. 31 60
  Lysobacter sp. OAE881 ABIE51_RS02840 TRAP transporter large permease insig. 31 61
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF795 TRAP-type C4-dicarboxylate transport system, large permease component insig. 30 65
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2429 TRAP-type C4-dicarboxylate transport system, large permease component insig. 31 64
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5230 TRAP-type C4-dicarboxylate transport system, large permease component insig. 30 60
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.203.1 TRAP-type C4-dicarboxylate transport system, large permease component insig. 30 61
  Pseudomonas sp. RS175 PFR28_01613 Sialic acid TRAP transporter large permease protein SiaM insig. 29 65
  Azospirillum sp. SherDot2 MPMX19_00661 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 28 65
  Escherichia coli ECRC62 BNILDI_07135 TRAP transporter large permease insig. 30 65
  Sinorhizobium meliloti 1021 SM_b20035 ABC transporter permease insig. 31 62
  Fusobacterium nucleatum SB010 HUW76_03975 TRAP transporter large permease strong 30 65
  Sinorhizobium meliloti 1021 SM_b20297 permease insig. 28 61
  Pseudomonas stutzeri RCH2 Psest_0361 TRAP transporter, DctM subunit insig. 31 64
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_485 TRAP-type C4-dicarboxylate transport system, large permease component insig. 29 61
  Agrobacterium fabrum C58 Atu3261 ABC transporter permease insig. 28 90
  Pantoea sp. MT58 IAI47_03220 TRAP transporter large permease insig. 27 64
  Pseudomonas sp. RS175 PFR28_00121 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 29 65
  Herbaspirillum seropedicae SmR1 HSERO_RS04250 C4-dicarboxylate ABC transporter permease sig. 28 62
  Variovorax sp. OAS795 ABID97_RS26070 TRAP transporter large permease subunit no data 33 64
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3132 TRAP-type C4-dicarboxylate transport system, large permease component insig. 30 67
  Acidovorax sp. GW101-3H11 Ac3H11_3520 TRAP-type C4-dicarboxylate transport system, large permease component insig. 30 64
  Pseudomonas sp. RS175 PFR28_02440 C4-dicarboxylate TRAP transporter large permease protein DctM strong 29 61
  Pseudomonas fluorescens FW300-N2C3 AO356_23045 hypothetical protein insig. 28 61
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1302 TRAP-type C4-dicarboxylate transport system, large permease component insig. 28 67
  Sinorhizobium meliloti 1021 SMc00273 transmembrane protein insig. 28 61
  Azospirillum sp. SherDot2 MPMX19_05867 Sialic acid TRAP transporter large permease protein SiaM insig. 28 64
  Desulfovibrio vulgaris Hildenborough JW710 DVU0009 dctM DedA family protein (TIGR) insig. 32 61
  Rhodospirillum rubrum S1H Rru_A3676 TRAP dicarboxylate transporter, DctM subunit (NCBI) strong 29 67
  Azospirillum brasilense Sp245 AZOBR_RS15920 Large component of TRAP-type D-gluconate transporter (from data) strong 27 62
  Rhodopseudomonas palustris CGA009 TX73_010560 TRAP transporter large permease subunit strong 27 67
  Azospirillum sp. SherDot2 MPMX19_03528 Sialic acid TRAP transporter large permease protein SiaM insig. 30 62
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2273 Predicted rhamnogalacturonide-specific TRAP-type transporter, large transmembrane component RhiC insig. 28 60
  Acidovorax sp. GW101-3H11 Ac3H11_3227 gluconate TRAP transporter, large permease component (from data) strong 29 58
  Acidovorax sp. GW101-3H11 Ac3H11_2071 TRAP-type C4-dicarboxylate transport system, large permease component insig. 30 60
  Rhizobium sp. OAE497 ABIE40_RS25810 TRAP transporter large permease insig. 28 65
  Azospirillum brasilense Sp245 AZOBR_RS16150 C4-dicarboxylate ABC transporter insig. 28 66
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2094 TRAP-type C4-dicarboxylate transport system, large permease component insig. 29 65