Homologs of HGI48_RS05730 from Dickeya dianthicola 67-19

SmdA family multidrug ABC transporter permease/ATP-binding protein
SEED: ATP-binding component of a transport system

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Dickeya dianthicola 67-19 HGI48_RS05730 SmdA family multidrug ABC transporter permease/ATP-binding protein cofit 100 100
o Dickeya dianthicola ME23 DZA65_RS06055 SmdA family multidrug ABC transporter permease/ATP-binding protein insig. 99 100
o Dickeya dadantii 3937 DDA3937_RS05685 SmdA family multidrug ABC transporter permease/ATP-binding protein insig. 97 100
o Rahnella sp. WP5 EX31_RS22305 SmdA family multidrug ABC transporter permease/ATP-binding protein insig. 77 99
o Pectobacterium carotovorum WPP14 HER17_RS15800 SmdA family multidrug ABC transporter permease/ATP-binding protein insig. 79 100
o Serratia liquefaciens MT49 IAI46_05070 SmdA family multidrug ABC transporter permease/ATP-binding protein insig. 76 100
o Pantoea sp. MT58 IAI47_14595 SmdA family multidrug ABC transporter permease/ATP-binding protein cofit 77 99
o Escherichia coli BL21 ECD_00400 putative multidrug ABC transporter ATPase insig. 75 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03225 putative multidrug resistance ABC transporter ATP-binding/permease protein YheI insig. 74 99
o Escherichia coli ECOR27 NOLOHH_01210 mdlA SmdA family multidrug ABC transporter permease/ATP-binding protein cofit 74 99
o Escherichia coli ECOR38 HEPCGN_06890 mdlA SmdA family multidrug ABC transporter permease/ATP-binding protein cofit 74 99
o Escherichia coli BW25113 b0448 mdlA fused predicted multidrug transporter subunits of ABC superfamily: ATP-binding components (NCBI) strong 74 99
o Escherichia fergusonii Becca EFB2_03609 putative multidrug resistance ABC transporter ATP-binding/permease protein YheI insig. 74 99
o Escherichia coli Nissle 1917 ECOLIN_RS02685 SmdA family multidrug ABC transporter permease/ATP-binding protein cofit 74 99
o Escherichia coli ECRC62 BNILDI_22625 mdlA SmdA family multidrug ABC transporter permease/ATP-binding protein insig. 74 99
o Escherichia coli ECRC101 OKFHMN_08275 mdlA SmdA family multidrug ABC transporter permease/ATP-binding protein insig. 74 99
o Escherichia coli ECRC101 MCAODC_27500 mdlA SmdA family multidrug ABC transporter permease/ATP-binding protein insig. 74 99
o Escherichia coli ECRC102 NIAGMN_06330 mdlA SmdA family multidrug ABC transporter permease/ATP-binding protein insig. 74 99
o Escherichia coli ECRC98 JDDGAC_11930 mdlA SmdA family multidrug ABC transporter permease/ATP-binding protein no data 74 99
o Escherichia coli ECRC99 KEDOAH_19690 mdlA SmdA family multidrug ABC transporter permease/ATP-binding protein no data 74 99
o Enterobacter asburiae PDN3 EX28DRAFT_2521 ABC-type multidrug transport system, ATPase and permease components cofit 75 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4365 ATP-binding component cofit 75 99
o Enterobacter sp. TBS_079 MPMX20_01040 putative multidrug resistance ABC transporter ATP-binding/permease protein YheI insig. 75 100
o Klebsiella michiganensis M5al BWI76_RS06585 multidrug ABC transporter permease/ATP-binding protein sig. 76 99
o Erwinia tracheiphila SCR3 LU632_RS18285 SmdA family multidrug ABC transporter permease/ATP-binding protein insig. 74 98
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS14130 ABC transporter ATP-binding protein cofit 32 96
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17755 ABC transporter strong 34 94
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS13260 ABC transporter strong 31 98
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1755 ABC-type multidrug transport system, ATPase and permease components strong 33 96
  Synechococcus elongatus PCC 7942 Synpcc7942_0082 mdlB ATPase no data 33 96
  Synechococcus elongatus PCC 7942 Synpcc7942_0640 ATPase strong 33 97
  Marinobacter adhaerens HP15 HP15_840 ABC transporter, transmembrane region: ABC transporter insig. 33 97
o Bifidobacterium breve UCC2003 BBR_RS19850 ABC transporter ATP-binding protein cofit 32 96
  Rhizobium sp. OAE497 ABIE40_RS19845 ABC transporter ATP-binding protein insig. 35 95
  Pseudomonas sp. RS175 PFR28_05080 Lipid A export ATP-binding/permease protein MsbA no data 34 95
  Pseudomonas sp. S08-1 OH686_09600 lipid A export permease/ATP-binding protein MsbA no data 34 87
  Pseudomonas fluorescens GW456-L13 PfGW456L13_196 Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25) no data 32 99
  Shewanella amazonensis SB2B Sama_1337 ABC transporter, ATP-binding protein MsbA (RefSeq) no data 33 91
  Variovorax sp. SCN45 GFF5208 Efflux ABC transporter, permease/ATP-binding protein Reut_A2584 cofit 32 98
  Pseudomonas fluorescens FW300-N2C3 AO356_08865 lipid transporter ATP-binding/permease no data 33 96
  Pseudomonas fluorescens FW300-N2E3 AO353_12955 lipid transporter ATP-binding/permease no data 32 97
  Variovorax sp. OAS795 ABID97_RS06905 ABC transporter ATP-binding protein cofit 31 98
  Pseudomonas stutzeri RCH2 Psest_0467 lipid A export permease/ATP-binding protein MsbA no data 33 89
  Castellaniella sp019104865 MT123 ABCV34_RS13160 ABC transporter ATP-binding protein strong 32 98
  Bacteroides ovatus ATCC 8483 BACOVA_01923 ABC transporter, ATP-binding protein no data 34 82
  Shewanella sp. ANA-3 Shewana3_2584 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA (RefSeq) no data 32 86
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3657 Lipid A export ATP-binding/permease protein MsbA no data 31 98
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17330 ABC transporter ATP-binding protein no data 31 87
  Agrobacterium fabrum C58 Atu1738 ABC transporter, nucleotide binding/ATPase protein insig. 30 95
  Fusobacterium nucleatum SB010 HUW76_07145 ABC transporter ATP-binding protein no data 29 96
  Shewanella oneidensis MR-1 SO2802 msbA ABC transporter, ATP-binding protein MsbA (NCBI ptt file) no data 32 86
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_12740 multidrug ABC transporter ATP-binding protein no data 31 94
  Magnetospirillum magneticum AMB-1 AMB_RS20685 lipid A export permease/ATP-binding protein MsbA no data 32 96
  Dechlorosoma suillum PS Dsui_2752 ABC-type multidrug transport system, ATPase and permease component insig. 33 99
  Pantoea sp. MT58 IAI47_18570 lipid A ABC transporter ATP-binding protein/permease MsbA insig. 32 88
  Synechococcus elongatus PCC 7942 Synpcc7942_2109 ATPase sig. 33 97
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS09225 ABC transporter ATP-binding protein no data 35 89
  Bacteroides thetaiotaomicron VPI-5482 BT3386 ABC transporter, ATP-binding protein (NCBI ptt file) no data 30 97
  Alteromonas macleodii MIT1002 MIT1002_01927 Lipid A export ATP-binding/permease protein MsbA no data 33 82
  Ralstonia sp. UNC404CL21Col ABZR87_RS17375 ABC transporter ATP-binding protein insig. 31 96
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1727 ABC-type multidrug transport system, ATPase and permease components strong 30 96
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1459 Lipid A export ATP-binding/permease protein MsbA no data 31 98
  Kangiella aquimarina DSM 16071 B158DRAFT_1598 lipid A export permease/ATP-binding protein MsbA no data 31 90
  Erwinia tracheiphila SCR3 LU632_RS09825 msbA lipid A ABC transporter ATP-binding protein/permease MsbA no data 30 93
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1737 ABC-type multidrug transport system, ATPase and permease components insig. 31 88
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1191 ABC-type multidrug transport system, ATPase and permease components no data 30 92
  Rahnella sp. WP5 EX31_RS09280 ABC transporter ATP-binding protein insig. 31 88
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3526 Lipid A export ATP-binding/permease protein MsbA cofit 32 98
  Pantoea sp. MT58 IAI47_12835 lipid A ABC transporter ATP-binding protein/permease MsbA no data 30 88
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS21145 ABC transporter ATP-binding protein insig. 30 93
  Rahnella sp. WP5 EX31_RS18225 lipid A ABC transporter ATP-binding protein/permease MsbA no data 31 92
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17735 antibiotic ABC transporter ATP-binding protein cofit 30 97
  Acidovorax sp. GW101-3H11 Ac3H11_4059 Lipid A export ATP-binding/permease protein MsbA strong 33 84
  Pseudomonas putida KT2440 PP_4935 Lipid A export ATP-binding/permease protein MsbA no data 32 96
  Klebsiella michiganensis M5al BWI76_RS09795 lipid ABC transporter permease/ATP-binding protein no data 31 90
  Serratia liquefaciens MT49 IAI46_08665 lipid A ABC transporter ATP-binding protein/permease MsbA no data 30 95
  Herbaspirillum seropedicae SmR1 HSERO_RS10850 ABC transporter strong 32 92
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3671 Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25) no data 30 88
  Bacteroides stercoris CC31F HMPREF1181_RS02515 ABC transporter ATP-binding protein no data 33 82
  Dechlorosoma suillum PS Dsui_0467 lipid A export permease/ATP-binding protein MsbA no data 32 98
  Enterobacter asburiae PDN3 EX28DRAFT_2022 lipid A export permease/ATP-binding protein MsbA no data 30 88
  Escherichia fergusonii Becca EFB2_03150 Lipid A export ATP-binding/permease protein MsbA no data 30 88
  Escherichia coli Nissle 1917 ECOLIN_RS04840 lipid A ABC transporter ATP-binding protein/permease MsbA no data 30 88
  Pectobacterium carotovorum WPP14 HER17_RS11475 ABC transporter ATP-binding protein/permease insig. 29 93
  Shewanella loihica PV-4 Shew_1638 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA (RefSeq) no data 32 83
  Escherichia coli BL21 ECD_00918 lipid ABC transporter permease/ATPase no data 30 90
  Escherichia coli ECOR27 NOLOHH_22015 msbA lipid A ABC transporter ATP-binding protein/permease MsbA no data 30 90
  Escherichia coli ECOR38 HEPCGN_23070 msbA lipid A ABC transporter ATP-binding protein/permease MsbA no data 30 90
  Escherichia coli ECRC101 OKFHMN_05455 msbA lipid A ABC transporter ATP-binding protein/permease MsbA no data 30 90
  Escherichia coli ECRC101 MCAODC_24845 msbA lipid A ABC transporter ATP-binding protein/permease MsbA no data 30 90
  Escherichia coli ECRC102 NIAGMN_03175 msbA lipid A ABC transporter ATP-binding protein/permease MsbA no data 30 90
  Escherichia coli ECRC62 BNILDI_20270 msbA lipid A ABC transporter ATP-binding protein/permease MsbA no data 30 90
  Escherichia coli ECRC98 JDDGAC_09065 msbA lipid A ABC transporter ATP-binding protein/permease MsbA no data 30 90
  Escherichia coli ECRC99 KEDOAH_22280 msbA lipid A ABC transporter ATP-binding protein/permease MsbA no data 30 90
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02753 Lipid A export ATP-binding/permease protein MsbA no data 30 90
  Escherichia coli BW25113 b0914 msbA fused lipid transporter subunits of ABC superfamily: membrane component/ATP-binding component (NCBI) no data 30 90
  Caulobacter crescentus NA1000 CCNA_03383 multidrug/protein/lipid ABC transporter family, ATP-binding and permease protein cofit 35 86
  Caulobacter crescentus NA1000 Δfur CCNA_03383 multidrug/protein/lipid ABC transporter family, ATP-binding and permease protein insig. 35 86
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15575 antibiotic ABC transporter ATP-binding protein strong 33 82
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS22795 antibiotic ABC transporter ATP-binding protein no data 31 86