Homologs of HER17_RS12330 from Pectobacterium carotovorum WPP14

LysR family transcriptional regulator
SEED: LysR-family transcriptional regulator

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pectobacterium carotovorum WPP14 HER17_RS12330 LysR family transcriptional regulator cofit 100 100
o Dickeya dianthicola ME23 DZA65_RS09965 LysR family transcriptional regulator insig. 72 96
o Dickeya dadantii 3937 DDA3937_RS09645 LysR family transcriptional regulator insig. 72 97
o Dickeya dianthicola 67-19 HGI48_RS09655 LysR family transcriptional regulator insig. 71 97
o Pseudomonas putida KT2440 PP_4522 Transcriptional regulator, LysR family sig. 30 88
o Pseudomonas sp. RS175 PFR28_00779 hypothetical protein strong 30 91
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_524 Transcriptional regulator GbuR insig. 30 88
o Pseudomonas simiae WCS417 PS417_20175 LysR family transcriptional regulator insig. 29 91
o Pseudomonas fluorescens SBW25 PFLU_RS22115 LysR family transcriptional regulator insig. 29 91
o Pseudomonas fluorescens SBW25-INTG PFLU_RS22115 LysR family transcriptional regulator strong 29 91
o Pseudomonas fluorescens FW300-N2C3 AO356_04090 LysR family transcriptional regulator insig. 30 88
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2654 Transcriptional regulator GbuR insig. 30 88
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4434 Transcriptional regulator GbuR insig. 30 88
o Azospirillum sp. SherDot2 MPMX19_03701 hypothetical protein insig. 30 92
o Pseudomonas fluorescens FW300-N2E3 AO353_18405 LysR family transcriptional regulator insig. 30 88
o Azospirillum brasilense Sp245 AZOBR_RS30800 transcriptional regulator insig. 30 92
o Pseudomonas sp. S08-1 OH686_11350 Transcriptional regulator GbuR insig. 30 90
  Pseudomonas sp. RS175 PFR28_05261 hypothetical protein strong 30 94
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2688 Transcriptional regulator, LysR family insig. 26 96
  Pseudomonas fluorescens FW300-N2E3 AO353_06090 LysR family transcriptional regulator strong 30 84
o Burkholderia phytofirmans PsJN BPHYT_RS05085 LysR family transcriptional regulator sig. 28 95
  Pseudomonas fluorescens FW300-N2C3 AO356_07960 LysR family transcriptional regulator strong 29 84
o Klebsiella michiganensis M5al BWI76_RS21930 LysR family transcriptional regulator insig. 28 90
  Azospirillum sp. SherDot2 MPMX19_06754 hypothetical protein insig. 28 94
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1240 LysR family transcriptional regulator PA0133 sig. 29 84
  Pseudomonas simiae WCS417 PS417_03240 LysR family transcriptional regulator sig. 30 84
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3464 LysR family transcriptional regulator PA0133 strong 29 84
  Burkholderia phytofirmans PsJN BPHYT_RS31520 LysR family transcriptional regulator insig. 27 88
  Pseudomonas putida KT2440 PP_0595 Transcriptional regulator, LysR family strong 28 89
  Pseudomonas fluorescens SBW25 PFLU_RS03320 LysR family transcriptional regulator insig. 30 84
  Pseudomonas fluorescens SBW25-INTG PFLU_RS03320 LysR family transcriptional regulator sig. 30 84
  Pseudomonas sp. S08-1 OH686_07320 LysR family transcriptional regulator insig. 31 87
o Pseudomonas syringae pv. syringae B728a Psyr_0677 transcriptional regulator, LysR family insig. 31 84
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0677 transcriptional regulator, LysR family insig. 31 84
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4 LysR family transcriptional regulator PA0133 strong 29 87
o Shewanella amazonensis SB2B Sama_1630 LysR family transcriptional regulator (RefSeq) strong 27 94
o Paraburkholderia graminis OAS925 ABIE53_001288 DNA-binding transcriptional LysR family regulator insig. 28 95
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00177 transcriptional regulator, LysR family insig. 27 95
o Paraburkholderia sabiae LMG 24235 QEN71_RS03395 LysR family transcriptional regulator insig. 28 95
o Acinetobacter radioresistens SK82 MPMX26_01249 HTH-type transcriptional regulator HdfR strong 28 96
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4807 Transcriptional regulator no data 29 93
o Rahnella sp. WP5 EX31_RS06810 LysR family transcriptional regulator sig. 26 93
  Pseudomonas sp. RS175 PFR28_01463 hypothetical protein insig. 29 93
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2673 LysR family transcriptional regulator Bucepa02002399 insig. 29 94
o Serratia liquefaciens MT49 IAI46_08230 LysR family transcriptional regulator insig. 28 88
  Pseudomonas simiae WCS417 PS417_21775 LysR family transcriptional regulator insig. 26 94
  Pseudomonas fluorescens FW300-N2C3 AO356_29665 LysR family transcriptional regulator insig. 29 93
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1797 Transcriptional regulator insig. 29 93
  Azospirillum sp. SherDot2 MPMX19_05490 hypothetical protein insig. 28 82
o Acidovorax sp. GW101-3H11 Ac3H11_4344 Regulatory protein, LysR:LysR, substrate-binding strong 27 95
o Variovorax sp. OAS795 ABID97_RS09325 LysR family transcriptional regulator no data 28 87
o Cupriavidus basilensis FW507-4G11 RR42_RS02460 LysR family transcriptional regulator insig. 29 93
  Klebsiella michiganensis M5al BWI76_RS21875 LysR family transcriptional regulator insig. 28 86
  Pseudomonas fluorescens FW300-N2E3 AO353_25580 LysR family transcriptional regulator sig. 27 93
  Pseudomonas sp. S08-1 OH686_14915 Transcriptional regulator, LysR family insig. 27 93
o Variovorax sp. SCN45 GFF6151 Transcriptional regulator, LysR family strong 27 87
o Ralstonia sp. UNC404CL21Col ABZR87_RS16045 LysR family transcriptional regulator insig. 27 93
  Pseudomonas putida KT2440 PP_2194 Transcriptional regulator, LysR family insig. 29 93
  Serratia liquefaciens MT49 IAI46_02650 LysR family transcriptional regulator insig. 29 84
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2987 Transcriptional regulator insig. 28 91
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4715 Transcriptional regulator insig. 28 91
o Herbaspirillum seropedicae SmR1 HSERO_RS08550 LysR family transcriptional regulator insig. 23 93
  Azospirillum brasilense Sp245 AZOBR_RS22510 LysR family transcriptional regulator insig. 27 99
o Ralstonia solanacearum GMI1000 RS_RS24690 LysR family transcriptional regulator strong 27 84
o Alteromonas macleodii MIT1002 MIT1002_01262 DNA-binding transcriptional activator XapR insig. 25 91
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS16320 LysR family transcriptional regulator insig. 26 80
  Ralstonia solanacearum UW163 UW163_RS17060 LysR family transcriptional regulator insig. 26 80
o Shewanella loihica PV-4 Shew_3174 LysR family transcriptional regulator (RefSeq) insig. 25 84
o Ralstonia solanacearum PSI07 RPSI07_RS07380 LysR family transcriptional regulator sig. 25 84
  Agrobacterium fabrum C58 Atu4021 LysR family transcriptional regulator insig. 26 67
  Castellaniella sp019104865 MT123 ABCV34_RS07760 LysR family transcriptional regulator cofit 25 80
  Escherichia coli ECRC101 OKFHMN_23585 lysR transcriptional regulator insig. 33 48
  Escherichia coli ECRC101 MCAODC_14635 lysR transcriptional regulator insig. 33 48
  Escherichia coli ECRC102 NIAGMN_21350 lysR transcriptional regulator insig. 33 48
  Escherichia coli ECRC98 JDDGAC_27540 lysR transcriptional regulator no data 33 48
  Escherichia coli ECRC99 KEDOAH_04600 lysR transcriptional regulator no data 33 48
  Escherichia coli ECRC62 BNILDI_14075 lysR transcriptional regulator insig. 34 48
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02334 DNA-binding transcriptional regulator, LysR family insig. 26 94
  Paraburkholderia graminis OAS925 ABIE53_000319 DNA-binding transcriptional LysR family regulator sig. 26 94
  Burkholderia phytofirmans PsJN BPHYT_RS19705 LysR family transcriptional regulator strong 26 94
  Dinoroseobacter shibae DFL-12 Dshi_0727 transcriptional regulator, LysR family (RefSeq) insig. 27 83
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2331 Cys regulon transcriptional activator CysB no data 26 90
  Ralstonia sp. UNC404CL21Col ABZR87_RS07845 LysR family transcriptional regulator insig. 25 92
  Burkholderia phytofirmans PsJN BPHYT_RS28500 LysR family transcriptional regulator no data 31 55
  Phaeobacter inhibens DSM 17395 PGA1_262p00980 transcriptional regulator, LysR family strong 27 61
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02950 DNA-binding transcriptional regulator, LysR family insig. 29 55
  Ralstonia sp. UNC404CL21Col ABZR87_RS22730 LysR family transcriptional regulator insig. 33 46
  Paraburkholderia sabiae LMG 24235 QEN71_RS17965 LysR family transcriptional regulator insig. 32 50
  Herbaspirillum seropedicae SmR1 HSERO_RS04125 LysR family transcriptional regulator insig. 30 46
  Pseudomonas syringae pv. syringae B728a Psyr_0767 transcriptional regulator, LysR family insig. 24 94
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0767 transcriptional regulator, LysR family insig. 24 94
  Rhodospirillum rubrum S1H Rru_A1540 Transcriptional Regulator, LysR family (NCBI) insig. 28 83
  Ralstonia sp. UNC404CL21Col ABZR87_RS12080 pca operon transcription factor PcaQ strong 31 54
  Pseudomonas sp. S08-1 OH686_13510 Hydrogen peroxide-inducible genes activator sig. 26 82
  Rhizobium sp. OAE497 ABIE40_RS01530 LysR family transcriptional regulator insig. 28 79
  Pseudomonas stutzeri RCH2 Psest_4191 Transcriptional regulator strong 25 82
  Burkholderia phytofirmans PsJN BPHYT_RS32760 LysR family transcriptional regulator insig. 28 52
  Pseudomonas putida KT2440 PP_5309 oxidative and nitrosative stress transcriptional dual regulator strong 26 82
  Herbaspirillum seropedicae SmR1 HSERO_RS22280 LysR family transcriptional regulator insig. 31 49
  Dickeya dadantii 3937 DDA3937_RS03225 LysR family transcriptional regulator insig. 25 77