| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Variovorax sp. SCN45 | GFF620 | | Transcriptional regulator, LysR family | insig. | 100 | 100 |
| o | Variovorax sp. OAS795 | ABID97_RS27660 | | LysR family transcriptional regulator | insig. | 87 | 100 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS35310 | | LysR family transcriptional regulator | insig. | 59 | 92 |
| | Pseudomonas sp. BP01 | JOY50_RS05175 | | LysR family transcriptional regulator | insig. | 37 | 87 |
| | Variovorax sp. OAS795 | ABID97_RS22240 | | LysR family transcriptional regulator | insig. | 37 | 88 |
| | Pseudomonas simiae WCS417 | PS417_19015 | | LysR family transcriptional regulator | insig. | 34 | 88 |
| | Variovorax sp. SCN45 | GFF6721 | | Transcriptional regulator, LysR family | insig. | 34 | 88 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS21070 | | LysR family transcriptional regulator | insig. | 33 | 88 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS21070 | | LysR family transcriptional regulator | sig. | 33 | 88 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01709 | | HTH-type transcriptional regulator HdfR | cofit | 32 | 81 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_1768 | | LysR family transcriptional regulator y2377 (Yersinia pestis KIM) | insig. | 31 | 87 |
| | Marinobacter adhaerens HP15 | HP15_2680 | | protein containing LysR, substrate-binding / Bacterial regulatory protein, LysR | insig. | 32 | 91 |
| | Rhodopseudomonas palustris CGA009 | TX73_008980 | | LysR family transcriptional regulator | insig. | 33 | 86 |
| | Xanthobacter sp. DMC5 | GFF44 | | HTH-type transcriptional regulator GltR | insig. | 30 | 84 |
| | Xanthobacter sp. DMC5 | GFF22 | | HTH-type transcriptional regulator HdfR | insig. | 33 | 81 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS09175 | | LysR family transcriptional regulator | insig. | 28 | 91 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS35930 | | LysR family transcriptional regulator | insig. | 29 | 89 |
| | Pseudomonas sp. BP01 | JOY50_RS05240 | | LysR family transcriptional regulator | insig. | 32 | 82 |
| | Azospirillum sp. SherDot2 | MPMX19_04948 | | HTH-type transcriptional regulator GltR | insig. | 29 | 80 |
| | Pseudomonas sp. BP01 | JOY50_RS05235 | | LysR family transcriptional regulator | insig. | 29 | 87 |
| | Pseudomonas sp. BP01 | JOY50_RS13610 | | LysR family transcriptional regulator | no data | 31 | 89 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS27710 | | LysR family transcriptional regulator | insig. | 29 | 91 |
| | Acinetobacter baumannii LAC-4 | RR41_RS10535 | | LysR family transcriptional regulator MumR | insig. | 29 | 88 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS19340 | | LysR family transcriptional regulator | insig. | 29 | 82 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1158 | | Cyn operon transcriptional activator | insig. | 28 | 92 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3364 | | Cyn operon transcriptional activator | insig. | 29 | 82 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_26400 | | LysR family transcriptional regulator | insig. | 29 | 92 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_488 | | Cyn operon transcriptional activator | insig. | 28 | 92 |
| | Variovorax sp. SCN45 | GFF5955 | | Transcriptional regulator, LysR family | insig. | 29 | 89 |
| | Pseudomonas sp. SVBP6 | COO64_RS22255 | | LysR family transcriptional regulator | insig. | 28 | 92 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4480 | | Cyn operon transcriptional activator | insig. | 28 | 82 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS05280 | | LysR family transcriptional regulator | insig. | 28 | 82 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_17985 | | LysR family transcriptional regulator | sig. | 28 | 82 |
| | Pseudomonas sp. RS175 | PFR28_01894 | | HTH-type transcriptional regulator HdfR | insig. | 30 | 76 |
| | Pseudomonas putida KT2440 | PP_4579 | | Transcriptional regulator, LysR family | strong | 27 | 92 |
| | Pseudomonas orientalis W4I3 | QF045_RS10115 | | LysR family transcriptional regulator | insig. | 30 | 71 |
| | Pseudomonas sp. DMC3 | GFF2325 | | HTH-type transcriptional regulator GltR | cofit | 30 | 71 |
| | Pseudomonas sp. BP01 | JOY50_RS01460 | | LysR family transcriptional regulator | insig. | 26 | 92 |
| | Sphingobium sp. HT1-2 | GFF355 | | Transcriptional regulator Swit_0960, LysR family | cofit | 29 | 86 |
| | Paraburkholderia graminis OAS925 | ABIE53_006554 | | DNA-binding transcriptional LysR family regulator | insig. | 29 | 88 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS07550 | | LysR family transcriptional regulator | insig. | 29 | 75 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS07550 | | LysR family transcriptional regulator | strong | 29 | 75 |
| | Pseudomonas simiae WCS417 | PS417_07465 | | LysR family transcriptional regulator | insig. | 30 | 71 |
| | Pseudomonas sp. BP01 | JOY50_RS04210 | | LysR family transcriptional regulator | no data | 24 | 86 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01626 | | HTH-type transcriptional regulator GltR | cofit | 29 | 71 |
| | Dinoroseobacter shibae DFL-12 | Dshi_3151 | | transcriptional regulator, LysR family (RefSeq) | insig. | 28 | 81 |
| | Sinorhizobium meliloti 1021 | SMa0498 | | LysR family transcriptional regulator | insig. | 29 | 79 |
| | Variovorax sp. OAS795 | ABID97_RS19615 | | LysR family transcriptional regulator | no data | 28 | 84 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS11470 | | LysR family transcriptional regulator | insig. | 29 | 82 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1155 | | Cyn operon transcriptional activator | strong | 26 | 85 |
| | Pseudomonas sp. RS175 | PFR28_01891 | | HTH-type transcriptional regulator GltR | strong | 26 | 86 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_26385 | | LysR family transcriptional regulator | insig. | 26 | 85 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS16615 | | LysR family transcriptional regulator | insig. | 28 | 85 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_10320 | | LysR family transcriptional regulator | no data | 31 | 51 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS16795 | | LysR family transcriptional regulator | strong | 31 | 51 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS39080 | | LysR family transcriptional regulator | strong | 31 | 51 |
| | Pseudomonas putida KT2440 | PP_3811 | | Transcriptional regulator, LysR family | insig. | 28 | 80 |
| | Pseudomonas sp. S08-1 | OH686_10780 | | Transcriptional regulator, LysR family | insig. | 26 | 85 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05275 | | transcriptional regulator, LysR family | insig. | 29 | 92 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS23900 | | LysR family transcriptional regulator | insig. | 29 | 88 |
| | Pseudomonas sp. BP01 | JOY50_RS04745 | | LysR family transcriptional regulator | insig. | 28 | 80 |
| | Serratia liquefaciens MT49 | IAI46_16195 | | LysR family transcriptional regulator | insig. | 28 | 84 |
| | Serratia liquefaciens MT49 | IAI46_03125 | | LysR family transcriptional regulator | insig. | 26 | 86 |
| | Variovorax sp. SCN45 | GFF5502 | | Transcriptional regulator, LysR family | insig. | 29 | 86 |
| | Shewanella oneidensis MR-1 | SO0369 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 28 | 82 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS08360 | | LysR family transcriptional regulator | insig. | 26 | 82 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS25465 | pycR;inference=COORDINATES | LysR family transcriptional regulator PycR | strong | 27 | 79 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_26240 | | LysR family transcriptional regulator PycR | strong | 27 | 79 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS57915 | pycR;inference=COORDINATES | LysR family transcriptional regulator PycR | strong | 27 | 79 |
| | Variovorax sp. OAS795 | ABID97_RS12840 | | LysR family transcriptional regulator | no data | 27 | 78 |
| | Shewanella sp. ANA-3 | Shewana3_3800 | | LysR family transcriptional regulator (RefSeq) | insig. | 29 | 80 |
| | Variovorax sp. OAS795 | ABID97_RS01765 | | LysR family transcriptional regulator | sig. | 29 | 86 |
| | Pseudomonas orientalis W4I3 | QF045_RS18865 | | LysR family transcriptional regulator | insig. | 29 | 81 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_0162 | | Transcriptional regulator | insig. | 26 | 71 |
| | Escherichia coli ECOR38 | HEPCGN_07680 | lysR | LysR family transcriptional regulator | insig. | 28 | 85 |
| | Xanthobacter sp. DMC5 | GFF3980 | | HTH-type transcriptional regulator HdfR | no data | 29 | 62 |
| | Rahnella sp. WP5 | EX31_RS20830 | | LysR family transcriptional regulator | insig. | 27 | 85 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_5062 | | transcriptional regulator, LysR family | strong | 25 | 76 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_5062 | | transcriptional regulator, LysR family | sig. | 25 | 76 |
| | Escherichia coli ECRC62 | BNILDI_09325 | yafC | DNA-binding transcriptional regulator YafC | insig. | 28 | 83 |
| | Lysobacter sp. OAE881 | ABIE51_RS12770 | | LysR family transcriptional regulator | insig. | 27 | 82 |
| | Pseudomonas sp. DMC3 | GFF943 | | HTH-type transcriptional regulator DmlR | cofit | 28 | 80 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS23685 | | LysR substrate-binding domain-containing protein | insig. | 27 | 87 |
| | Bosea sp. OAE506 | ABIE41_RS20280 | | LysR family transcriptional regulator | insig. | 25 | 81 |
| | Sinorhizobium meliloti 1021 | SMc00820 | | transcriptional regulator | sig. | 24 | 87 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS22460 | | LysR family transcriptional regulator | insig. | 25 | 85 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_19025 | | LysR family transcriptional regulator | insig. | 28 | 77 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03453 | | HTH-type transcriptional regulator DmlR | insig. | 27 | 83 |
| | Escherichia coli BW25113 | b0208 | yafC | predicted DNA-binding transcriptional regulator (NCBI) | insig. | 27 | 83 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS02200 | | LysR family transcriptional regulator | insig. | 27 | 85 |
| | Escherichia coli BL21 | ECD_00201 | | LysR family putative transcriptional regulator | insig. | 27 | 83 |
| | Pseudomonas sp. S08-1 | OH686_13195 | | Transcriptional regulator, LysR family | strong | 26 | 82 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS17965 | | LysR family transcriptional regulator | insig. | 28 | 84 |
| | Escherichia coli ECOR27 | NOLOHH_02345 | yafC | DNA-binding transcriptional regulator YafC | insig. | 27 | 83 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS36865 | | LysR family transcriptional regulator | insig. | 25 | 85 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_22970 | | LysR family transcriptional regulator | insig. | 25 | 85 |
| | Agrobacterium fabrum C58 | Atu0654 | | transcriptional regulator, LysR family | strong | 25 | 87 |
| | Paraburkholderia graminis OAS925 | ABIE53_005522 | | DNA-binding transcriptional LysR family regulator | strong | 23 | 82 |
| | Agrobacterium fabrum C58 | Atu5392 | | LysR family transcriptional regulator | no data | 28 | 78 |
| | Escherichia coli ECOR38 | HEPCGN_07940 | yafC | DNA-binding transcriptional regulator YafC | insig. | 27 | 83 |