Homologs of Psest_3052 from Pseudomonas stutzeri RCH2

Site-specific recombinase XerD
SEED: putative integrase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas stutzeri RCH2 Psest_3052 Site-specific recombinase XerD insig. 100 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS43980 tyrosine-type recombinase/integrase insig. 69 98
o Pseudomonas aeruginosa MRSN321 DY961_RS08885 tyrosine-type recombinase/integrase cofit 70 97
  Pseudomonas stutzeri RCH2 Psest_4123 Site-specific recombinase XerD sig. 51 99
o Pseudomonas aeruginosa PA14 IKLFDK_05595 integrase insig. 50 98
  Marinobacter adhaerens HP15 HP15_3093 phage integrase family protein insig. 48 96
  Pseudomonas aeruginosa PA14 IKLFDK_03615 Putative integrase sig. 52 71
  Burkholderia phytofirmans PsJN BPHYT_RS01250 integrase insig. 42 98
  Pectobacterium carotovorum WPP14 HER17_RS18625 tyrosine-type recombinase/integrase cofit 40 97
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_05430 xerD integrase cofit 39 97
  Erwinia tracheiphila SCR3 LU632_RS03480 tyrosine-type recombinase/integrase insig. 39 97
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS11660 site-specific integrase no data 38 97
  Dickeya dianthicola 67-19 HGI48_RS02890 tyrosine-type recombinase/integrase insig. 39 97
  Pantoea sp. MT58 IAI47_02995 tyrosine-type recombinase/integrase insig. 38 98
  Pseudomonas segetis P6 ACVTMO_RS04260 phage integrase insig. 39 97
  Pseudomonas segetis P6 ACVTMO_RS21410 phage integrase insig. 39 97
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02862 Tyrosine recombinase XerD insig. 39 98
  Escherichia fergusonii Becca EFB2_03259 Tyrosine recombinase XerC insig. 39 98
  Klebsiella pneumoniae MKP103 KDGMDA_17435 integrase insig. 39 98
  Enterobacter sp. TBS_079 MPMX20_03950 Tyrosine recombinase XerC strong 38 95
  Pectobacterium carotovorum WPP14 HER17_RS07965 tyrosine-type recombinase/integrase insig. 40 97
  Dickeya dadantii 3937 DDA3937_RS04115 site-specific integrase insig. 38 98
  Dickeya dianthicola ME23 DZA65_RS04005 site-specific integrase insig. 38 98
  Pectobacterium carotovorum WPP14 HER17_RS05350 site-specific integrase insig. 38 98
  Klebsiella michiganensis M5al BWI76_RS09185 integrase insig. 38 98
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_01645 Integrase no data 37 97
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_27510 Integrase no data 37 97
  Erwinia tracheiphila SCR3 LU632_RS01475 tyrosine-type recombinase/integrase sig. 37 97
  Escherichia coli ECRC62 BNILDI_11500 xerD integrase cofit 37 98
  Escherichia coli BL21 ECD_00815 integrase for prophage insig. 39 91
  Pseudomonas aeruginosa PUPa3 DQ20_RS55485 tyrosine-type recombinase/integrase insig. 41 95
  Escherichia coli ECRC102 NIAGMN_02040 xerD integrase insig. 37 97
  Escherichia coli ECRC98 JDDGAC_00600 xerD integrase insig. 38 97
  Escherichia coli ECRC100 OKFHMN_26010 xerD integrase insig. 37 97
  Escherichia coli ECRC101 MCAODC_19380 xerD integrase insig. 37 97
  Escherichia coli ECRC99 KEDOAH_02080 xerD integrase no data 37 97
  Klebsiella pneumoniae MKP103 KDGMDA_02490 integrase insig. 36 98
  Pseudomonas segetis P6 ACVTMO_RS06550 phage integrase insig. 40 95
o Enterobacter asburiae PDN3 EX28DRAFT_0878 Site-specific recombinase XerD insig. 36 98
  Pseudomonas stutzeri RCH2 Psest_2903 Site-specific recombinase XerD insig. 39 95
  Escherichia coli ECRC101 MCAODC_20995 int Integrase insig. 36 98
  Pseudomonas sp. S08-1 OH686_07985 Phage integrase cofit 39 92
  Rahnella sp. WP5 EX31_RS18465 tyrosine-type recombinase/integrase insig. 35 98
  Escherichia coli ECOR38 HEPCGN_04445 xerD integrase insig. 40 80
  Escherichia coli ECRC98 JDDGAC_09320 integrase strong 35 98
  Vibrio cholerae E7946 ATCC 55056 CSW01_11165 integrase insig. 35 97
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_25970 Tyr recombinase domain-containing protein cofit 32 85
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_01510 Integrase cofit 37 65
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_23350 integrase no data 42 49
  Pseudomonas aeruginosa PA14 IKLFDK_29580 putative bacteriophage integrase no data 53 33
  Erwinia tracheiphila SCR3 LU632_RS21160 tyrosine-type recombinase/integrase no data 39 50
  Pseudomonas sp. S08-1 OH686_16965 hypothetical protein' product='hypothetical protein insig. 57 27
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_25455 Site-specific recombinase phage integrase family protein cofit 43 34
  Escherichia coli ECOR38 HEPCGN_26815 xerD integrase insig. 64 20
  Sinorhizobium meliloti 1021 SMc02397 integrase insig. 31 65
  Desulfovibrio vulgaris Hildenborough JW710 DVU2197 site-specific recombinase, phage integrase family (TIGR) insig. 27 62
  Agrobacterium fabrum C58 Atu1194 phage-related integrase insig. 22 90
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_25445 Phage integrase N-terminal SAM-like domain cofit 28 41
  Rhodanobacter denitrificans MT42 LRK55_RS00045 site-specific integrase insig. 26 89
  Magnetospirillum magneticum AMB-1 AMB_RS19880 site-specific tyrosine recombinase XerD cofit 28 76
  Cellulophaga baltica 18 M666_RS09150 tyrosine-type recombinase/integrase sig. 25 64
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0827 Site-specific recombinase XerD insig. 25 60
  Sphingobium sp. HT1-2 GFF3220 Phage (Mu-like) virion morphogenesis protein cofit 24 69
  Azospirillum sp. SherDot2 MPMX19_02110 Tyrosine recombinase XerC no data 24 63
  Shewanella oneidensis MR-1 SO_A0045 site-specific recombinase, phage integrase family (NCBI) insig. 27 59
  Bifidobacterium breve UCC2003 BBR_RS16755 site-specific tyrosine recombinase XerD strong 52 13
  Pseudomonas sp. DMC3 GFF370 Tyrosine recombinase XerC cofit 23 65
  Sphingobium sp. HT1-2 GFF251 Site-specific tyrosine recombinase XerC cofit 29 39
  Dinoroseobacter shibae DFL-12 Dshi_0395 integrase family protein (RefSeq) insig. 29 59
  Sphingobium sp. HT1-2 GFF2416 Site-specific tyrosine recombinase XerD strong 26 55
  Marinobacter adhaerens HP15 HP15_762 site-specific tyrosine recombinase XerD insig. 24 67
  Rhodopseudomonas palustris CGA009 TX73_000945 tyrosine recombinase XerC sig. 30 39
  Rhodospirillum rubrum S1H Rru_A1220 Phage integrase (NCBI) no data 28 47
  Acinetobacter baumannii LAC-4 RR41_RS04465 tyrosine recombinase no data 26 38
  Magnetospirillum magneticum AMB-1 AMB_RS21485 tyrosine recombinase XerC no data 26 61
  Azospirillum brasilense Sp245 AZOBR_RS03240 recombinase XerD insig. 26 49
  Phaeobacter inhibens DSM 17395 PGA1_c00260 putative phage integrase, catalytic core insig. 29 47
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_09695 integrase strong 28 51
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00850 site-specific tyrosine recombinase XerD no data 26 61
  Desulfovibrio vulgaris Hildenborough JW710 DVU1757 site-specific recombinase, phage integrase family (TIGR) insig. 25 62
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15025 tyrosine recombinase XerC strong 24 72
  Azospirillum brasilense Sp245 AZOBR_RS03965 tyrosine recombinase XerC no data 29 30
  Sinorhizobium meliloti 1021 SMa1619 integrase/recombinase no data 29 64
  Sinorhizobium meliloti 1021 SMa2187 Integrase/recombinase no data 29 64
  Azospirillum brasilense Sp245 AZOBR_RS24420 integrase insig. 28 57
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09520 site-specific tyrosine recombinase XerD sig. 24 61
  Phaeobacter inhibens DSM 17395 PGA1_c05760 putative tyrosine recombinase XerC strong 26 64
  Dinoroseobacter shibae DFL-12 Dshi_3700 integrase family protein (RefSeq) insig. 25 66
  Methylophilus sp. DMC18 GFF1535 Tyrosine recombinase XerC insig. 27 38
  Caulobacter crescentus NA1000 CCNA_03101 site-specific tyrosine recombinase XerD strong 42 16
  Caulobacter crescentus NA1000 Δfur CCNA_03101 site-specific tyrosine recombinase XerD cofit 42 16
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2764 Site-specific recombinase XerD sig. 28 39
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS10220 site-specific tyrosine recombinase XerD insig. 26 47
  Bacteroides stercoris CC31F HMPREF1181_RS00625 tyrosine recombinase XerC cofit 23 68
  Rhodanobacter sp. FW510-T8 OKGIIK_15325 xerC tyrosine recombinase XerC insig. 26 45
  Acinetobacter radioresistens SK82 MPMX26_02230 Tyrosine recombinase XerC no data 26 38
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19035 integrase no data 24 66
  Pseudomonas fluorescens FW300-N2E3 AO353_09050 recombinase XerC sig. 24 65
  Desulfovibrio vulgaris Hildenborough JW710 DVU2828 site-specific recombinase, phage integrase family (TIGR) insig. 28 59
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_18560 hypothetical protein insig. 28 39