| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Sphingobium sp. HT1-2 | GFF2570 | | Uncharacterized amino acid permease, GabP family | cofit | 100 | 100 |
| o | Mycobacterium tuberculosis H37Rv | Rv2320c | | Probable cationic amino acid transport integral membrane protein RocE | insig. | 54 | 97 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS13545 | | amino acid permease | sig. | 48 | 97 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS15760 | | amino acid permease | insig. | 47 | 97 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS01725 | | amino acid permease | insig. | 45 | 97 |
| o | Ralstonia solanacearum UW163 | UW163_RS15035 | | amino acid permease | insig. | 45 | 97 |
| o | Ralstonia solanacearum GMI1000 | RS_RS08000 | | amino acid permease | sig. | 47 | 97 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_1053 | | amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3) | strong | 45 | 97 |
| | Paraburkholderia graminis OAS925 | ABIE53_000447 | | APA family basic amino acid/polyamine antiporter | insig. | 45 | 97 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS01585 | | amino acid permease | insig. | 45 | 97 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS00500 | | amino acid permease | insig. | 45 | 97 |
| | Sphingobium sp. HT1-2 | GFF3354 | | Uncharacterized amino acid permease, GabP family | insig. | 44 | 97 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02180 | | amino acid/polyamine/organocation transporter, APC superfamily | insig. | 45 | 97 |
| o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS06670 | | amino acid permease | sig. | 43 | 95 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS01785 | | amino acid permease | insig. | 44 | 97 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS15000 | | amino acid permease | strong | 39 | 97 |
| o | Rhodanobacter sp. FW510-T8 | OKGIIK_05010 | potE | amino acid permease | insig. | 44 | 94 |
| o | Bifidobacterium breve UCC2003 | BBR_RS13165 | | amino acid permease | sig. | 42 | 97 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2935.1 | | Amino acid transporters | strong | 41 | 98 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS01315 | | amino acid permease | cofit | 43 | 94 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS01525 | | amino acid permease | sig. | 43 | 94 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS08520 | | amino acid permease | cofit | 43 | 94 |
| | Lysobacter sp. OAE881 | ABIE51_RS13260 | | amino acid permease | strong | 43 | 93 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2936.1 | | Amino acid transporters | sig. | 44 | 95 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS17395 | | amino acid transporter | sig. | 38 | 95 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS13815 | | amino acid permease | insig. | 39 | 95 |
| | Caulobacter crescentus NA1000 | CCNA_00435 | | L-proline transporter (from data) | strong | 39 | 97 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_00435 | | amino acid transporter | cofit | 39 | 97 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS09620 | | amino acid permease | insig. | 38 | 94 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS11630 | | amino acid permease | strong | 37 | 93 |
| | Lysobacter sp. OAE881 | ABIE51_RS13265 | | amino acid permease | strong | 44 | 95 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS21660 | | amino acid permease | sig. | 43 | 98 |
| | Lysobacter sp. OAE881 | ABIE51_RS09125 | | amino acid permease | strong | 41 | 97 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_1577 | | L-glutamine and L-histidine transporter (from data) | strong | 43 | 96 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.5381.1 | | amino acid transporter | insig. | 40 | 97 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS08525 | | amino acid permease | strong | 40 | 97 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS01520 | | amino acid permease | strong | 40 | 97 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS01310 | | amino acid permease | strong | 40 | 97 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS05420 | | amino acid permease | strong | 41 | 96 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09570 | | amino acid permease | sig. | 40 | 93 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS33230 | | amino acid permease | sig. | 40 | 96 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS06560 | | amino acid permease | insig. | 43 | 95 |
| o | Methylophilus sp. DMC18 | GFF1640 | | putative amino acid permease YhdG | insig. | 41 | 97 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS06665 | | L-proline transporter (from data) | sig. | 41 | 87 |
| | Caulobacter crescentus NA1000 | CCNA_01242 | | amino acid permease | strong | 39 | 97 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_01242 | | amino acid permease | cofit | 39 | 97 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_05015 | | Amino acid permease | sig. | 42 | 97 |
| | Sphingobium sp. HT1-2 | GFF1193 | | Uncharacterized amino acid permease, GabP family | cofit | 41 | 94 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS12060 | | amino acid permease | insig. | 42 | 86 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS11795 | | amino acid permease | insig. | 42 | 84 |
| | Sphingobium sp. HT1-2 | GFF3802 | | Uncharacterized amino acid permease, GabP family | cofit | 40 | 97 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS20510 | | amino acid permease | insig. | 38 | 97 |
| | Rhodopseudomonas palustris CGA009 | TX73_003040 | | amino acid permease | insig. | 39 | 85 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS04980 | | amino acid permease | strong | 35 | 85 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS03275 | | amino acid permease | insig. | 36 | 97 |
| | Mycobacterium tuberculosis H37Rv | Rv3253c | | Possible cationic amino acid transport integral membrane protein | insig. | 36 | 97 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_13470 | potE | amino acid permease | insig. | 35 | 97 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS16130 | | amino acid permease | insig. | 37 | 97 |
| | Bifidobacterium breve UCC2003 | BBR_RS19060 | | amino acid permease | strong | 32 | 97 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS10095 | | amino acid permease | cofit | 35 | 97 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS10455 | | amino acid permease | insig. | 35 | 97 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09565 | | amino acid transporter | insig. | 36 | 86 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS15145 | | amino acid permease | sig. | 33 | 90 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3582 | | Aspartate-proton symporter | insig. | 28 | 86 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS36375 | | aspartate:proton symporter | insig. | 29 | 87 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03154 | | Aspartate-proton symporter | cofit | 28 | 86 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS16195 | | APC family permease | insig. | 28 | 86 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS16195 | | APC family permease | strong | 28 | 86 |
| | Pseudomonas orientalis W4I3 | QF045_RS15545 | | APC family permease | cofit | 28 | 86 |
| | Pseudomonas simiae WCS417 | PS417_14300 | | aspartate:proton symporter | insig. | 28 | 86 |
| | Pseudomonas sp. DMC3 | GFF1066 | | Aspartate-proton symporter | cofit | 28 | 82 |
| | Pseudomonas sp. BP01 | JOY50_RS01610 | | APC family permease | insig. | 27 | 86 |
| | Acinetobacter baumannii LAC-4 | RR41_RS10835 | | APC family permease | insig. | 28 | 84 |
| | Pseudomonas putida KT2440 | PP_1259 | | Aspartate-proton symporter | strong | 27 | 87 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS22020 | | APC family permease | sig. | 31 | 86 |
| | Ralstonia solanacearum UW163 | UW163_RS22560 | | APC family permease | insig. | 31 | 86 |
| | Erwinia amylovora T8 | OLJFJH_10380 | | aspartate:proton symporter | insig. | 28 | 83 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2134.1 | | hypothetical protein | insig. | 27 | 86 |
| | Serratia liquefaciens MT49 | IAI46_09140 | | APC family permease | insig. | 27 | 86 |
| | Ralstonia solanacearum GMI1000 | RS_RS18515 | | APC family permease | strong | 30 | 83 |
| | Rahnella sp. WP5 | EX31_RS12295 | | APC family permease | insig. | 29 | 85 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS01175 | | APC family permease | cofit | 30 | 82 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS05285 | | APC family permease | strong | 29 | 81 |
| o | Klebsiella michiganensis M5al | BWI76_RS08745 | | proline-specific permease | insig. | 30 | 94 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS05065 | | APC family permease | cofit | 29 | 81 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_4834 | | histidine:proton symporter, AAT family | sig. | 29 | 89 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4834 | | histidine:proton symporter, AAT family | sig. | 29 | 89 |
| o | Acinetobacter radioresistens SK82 | MPMX26_00708 | | Low-affinity putrescine importer PlaP | sig. | 26 | 94 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS22700 | | APC family permease | strong | 30 | 83 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS17540 | | L-aspartate/L-glutamate/L-glutamine:H+ symporter (from data) | sig. | 30 | 86 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_01535 | | Amino acid transporter | insig. | 28 | 83 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_17010 | | proline-specific permease ProY | insig. | 29 | 94 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS04730 | | APC family permease | cofit | 28 | 84 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37225 | | APC family permease | insig. | 28 | 83 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.4653.1 | | amino acid transporter | sig. | 27 | 84 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS04240 | | amino acid permease | insig. | 29 | 84 |
| | Paraburkholderia graminis OAS925 | ABIE53_003668 | | amino acid transporter | strong | 30 | 86 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.4819.1 | | Amino acid permease | insig. | 30 | 85 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05687 | | amino acid/polyamine/organocation transporter, APC superfamily | sig. | 29 | 86 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_12545 | | Amino acid permease | cofit | 28 | 84 |