| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Pseudomonas simiae WCS417 | PS417_06570 | | LysR family transcriptional regulator | insig. | 100 | 100 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS06600 | | LysR family transcriptional regulator | insig. | 96 | 100 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS06600 | | LysR family transcriptional regulator | insig. | 96 | 100 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01477 | | HTH-type transcriptional regulator DmlR | insig. | 93 | 100 |
| o | Pseudomonas orientalis W4I3 | QF045_RS09365 | | LysR family transcriptional regulator | insig. | 92 | 100 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_17080 | | LysR family transcriptional regulator | insig. | 88 | 100 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4612 | | Transcriptional regulator, LysR family | insig. | 88 | 100 |
| o | Pseudomonas sp. DMC3 | GFF2177 | | HTH-type transcriptional regulator DmlR | insig. | 88 | 100 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3207 | | Transcriptional regulator, LysR family | insig. | 87 | 100 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2931 | | Transcriptional regulator, LysR family | insig. | 85 | 100 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_05365 | | LysR family transcriptional regulator | insig. | 84 | 100 |
| o | Pseudomonas sp. RS175 | PFR28_00531 | | HTH-type transcriptional regulator DmlR | insig. | 85 | 100 |
| o | Pseudomonas sp. SVBP6 | COO64_RS17080 | | LysR family transcriptional regulator | insig. | 76 | 100 |
| o | Pseudomonas sp. S08-1 | OH686_18385 | | Transcriptional regulator, LysR family | insig. | 70 | 100 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS07120 | | LysR family transcriptional regulator | insig. | 69 | 98 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_04895 | | LysR family transcriptional regulator | insig. | 69 | 98 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS45670 | | LysR family transcriptional regulator | insig. | 69 | 98 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21915 | | LysR family transcriptional regulator | strong | 38 | 97 |
| | Shewanella sp. ANA-3 | Shewana3_3800 | | LysR family transcriptional regulator (RefSeq) | insig. | 36 | 96 |
| | Shewanella oneidensis MR-1 | SO0369 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 36 | 96 |
| | Azospirillum sp. SherDot2 | MPMX19_05002 | | HTH-type transcriptional regulator DmlR | insig. | 36 | 97 |
| | Alteromonas macleodii MIT1002 | MIT1002_02674 | | D-malate degradation protein R | strong | 33 | 97 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5905 | | Transcriptional regulator, LysR family | insig. | 36 | 95 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3857 | | Transcriptional regulator, LysR family | insig. | 36 | 95 |
| | Azospirillum sp. SherDot2 | MPMX19_04565 | | HTH-type transcriptional regulator PgrR | insig. | 36 | 90 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_22295 | | LysR family transcriptional regulator | insig. | 36 | 99 |
| | Serratia liquefaciens MT49 | IAI46_20610 | | LysR family transcriptional regulator | insig. | 33 | 96 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_19415 | | LysR family transcriptional regulator | insig. | 32 | 98 |
| | Alteromonas macleodii MIT1002 | MIT1002_03329 | | D-malate degradation protein R | strong | 34 | 94 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS08395 | | LysR family transcriptional regulator | insig. | 36 | 95 |
| | Pseudomonas putida KT2440 | PP_3811 | | Transcriptional regulator, LysR family | insig. | 35 | 95 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_19025 | | LysR family transcriptional regulator | insig. | 34 | 94 |
| | Shewanella oneidensis MR-1 | SO2053 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 36 | 94 |
| | Shewanella loihica PV-4 | Shew_2292 | | LysR family transcriptional regulator (RefSeq) | insig. | 35 | 94 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS02875 | | LysR family transcriptional regulator | insig. | 34 | 98 |
| | Ralstonia solanacearum GMI1000 | RS_RS16695 | | LysR family transcriptional regulator | insig. | 37 | 90 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02593 | | HTH-type transcriptional regulator DmlR | cofit | 36 | 95 |
| | Methylophilus sp. DMC18 | GFF2818 | | HTH-type transcriptional regulator DmlR | insig. | 35 | 97 |
| | Pseudomonas sp. BP01 | JOY50_RS04745 | | LysR family transcriptional regulator | insig. | 35 | 95 |
| | Marinobacter adhaerens HP15 | HP15_936 | | transcriptional regulator, LysR family protein | insig. | 33 | 98 |
| | Shewanella amazonensis SB2B | Sama_0005 | | LysR, substrate-binding (RefSeq) | insig. | 36 | 89 |
| | Pseudomonas simiae WCS417 | PS417_16085 | | LysR family transcriptional regulator | insig. | 35 | 95 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS18050 | | LysR family transcriptional regulator | insig. | 35 | 95 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS18050 | | LysR family transcriptional regulator | insig. | 35 | 95 |
| | Serratia liquefaciens MT49 | IAI46_16195 | | LysR family transcriptional regulator | insig. | 33 | 94 |
| | Pseudomonas simiae WCS417 | PS417_09485 | | LysR family transcriptional regulator | insig. | 32 | 98 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_259 | | Transcriptional regulator, LysR family | insig. | 34 | 95 |
| | Enterobacter sp. TBS_079 | MPMX20_03531 | | HTH-type transcriptional regulator DmlR | insig. | 37 | 96 |
| | Pseudomonas orientalis W4I3 | QF045_RS13895 | | LysR family transcriptional regulator | insig. | 35 | 95 |
| | Acinetobacter baumannii LAC-4 | RR41_RS10935 | | LysR family transcriptional regulator | insig. | 34 | 95 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS08880 | | LysR family transcriptional regulator | insig. | 37 | 90 |
| | Ralstonia solanacearum UW163 | UW163_RS04730 | | LysR family transcriptional regulator | insig. | 37 | 90 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS42300 | gfnR;inference=COORDINATES | glutathione-dependent formaldehyde neutralization regulator | insig. | 36 | 95 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS15810 | | LysR family transcriptional regulator | insig. | 33 | 99 |
| | Shewanella sp. ANA-3 | Shewana3_1836 | | LysR family transcriptional regulator (RefSeq) | insig. | 35 | 94 |
| | Pseudomonas sp. DMC3 | GFF943 | | HTH-type transcriptional regulator DmlR | cofit | 35 | 95 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS09305 | | LysR family transcriptional regulator | insig. | 34 | 95 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3607 | | transcriptional regulator, LysR family | insig. | 33 | 100 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3607 | | transcriptional regulator, LysR family | insig. | 33 | 100 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS14825 | gfnR;inference=COORDINATES | glutathione-dependent formaldehyde neutralization regulator | insig. | 36 | 95 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_18535 | | glutathione-dependent formaldehyde neutralization regulator | insig. | 35 | 95 |
| | Pseudomonas sp. SVBP6 | COO64_RS19755 | | LysR substrate-binding domain-containing protein | insig. | 37 | 92 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1366 | | transcriptional regulator, LysR family | insig. | 36 | 94 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1366 | | transcriptional regulator, LysR family | insig. | 36 | 94 |
| | Serratia liquefaciens MT49 | IAI46_20535 | | LysR family transcriptional regulator | insig. | 35 | 96 |
| | Shewanella loihica PV-4 | Shew_2278 | | LysR family transcriptional regulator (RefSeq) | insig. | 32 | 98 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_05040 | | LysR family transcriptional regulator | insig. | 36 | 94 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_21990 | | LysR family transcriptional regulator | insig. | 33 | 95 |
| | Lysobacter sp. OAE881 | ABIE51_RS06090 | | LysR family transcriptional regulator | insig. | 36 | 97 |
| | Pseudomonas sp. BP01 | JOY50_RS23715 | | LysR substrate-binding domain-containing protein | insig. | 37 | 92 |
| | Caulobacter crescentus NA1000 | CCNA_02602 | | LysR-family transcriptional regulator | insig. | 34 | 95 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_02602 | | LysR-family transcriptional regulator | insig. | 34 | 95 |
| | Pseudomonas sp. RS175 | PFR28_02643 | | HTH-type transcriptional regulator DmlR | insig. | 33 | 97 |
| | Pseudomonas putida KT2440 | PP_1615 | | Transcriptional regulator, LysR family | strong | 36 | 95 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3107 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | insig. | 36 | 94 |
| | Pseudomonas sp. RS175 | PFR28_00419 | | HTH-type transcriptional regulator DmlR | strong | 36 | 95 |
| | Shewanella loihica PV-4 | Shew_3105 | | LysR family transcriptional regulator (RefSeq) | no data | 33 | 97 |
| | Pseudomonas sp. DMC3 | GFF2076 | | HTH-type transcriptional regulator DmlR | insig. | 36 | 94 |
| | Rahnella sp. WP5 | EX31_RS16730 | | LysR family transcriptional regulator | insig. | 34 | 94 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS33760 | | hypothetical protein | insig. | 33 | 97 |
| | Bosea sp. OAE506 | ABIE41_RS06370 | | LysR family transcriptional regulator | insig. | 32 | 97 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS01140 | | LysR family transcriptional regulator | cofit | 35 | 96 |
| | Pseudomonas sp. S08-1 | OH686_04560 | | Transcriptional regulator, LysR family | cofit | 35 | 97 |
| | Shewanella oneidensis MR-1 | SOA0165 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 33 | 95 |
| | Rahnella sp. WP5 | EX31_RS04005 | | LysR family transcriptional regulator | insig. | 36 | 89 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4683 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | insig. | 35 | 94 |
| | Pseudomonas sp. S08-1 | OH686_18145 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | insig. | 35 | 95 |
| | Dechlorosoma suillum PS | Dsui_1892 | | transcriptional regulator | insig. | 33 | 97 |
| | Pseudomonas orientalis W4I3 | QF045_RS09170 | | LysR substrate-binding domain-containing protein | insig. | 35 | 92 |
| | Rahnella sp. WP5 | EX31_RS06010 | | LysR family transcriptional regulator | insig. | 35 | 90 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2951 | | transcriptional regulator, LysR family | insig. | 32 | 95 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2951 | | transcriptional regulator, LysR family | insig. | 32 | 95 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS15880 | | LysR family transcriptional regulator | insig. | 35 | 94 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS15880 | | LysR family transcriptional regulator | insig. | 35 | 94 |
| | Pseudomonas sp. RS175 | PFR28_03380 | | HTH-type transcriptional regulator DmlR | insig. | 35 | 95 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS12490 | | LysR family transcriptional regulator | insig. | 32 | 97 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_16575 | | LysR family transcriptional regulator | insig. | 35 | 94 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3045 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | strong | 35 | 94 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_05925 | | LysR family transcriptional regulator | strong | 35 | 95 |
| | Rahnella sp. WP5 | EX31_RS11970 | | LysR family transcriptional regulator | insig. | 36 | 95 |