Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1002 | | Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) | insig. | 100 | 100 |
o | Escherichia coli BL21 | ECD_04216 | | endonuclease R Type I restriction enzyme | insig. | 91 | 100 |
o | Escherichia coli BW25113 | b4350 | hsdR | endonuclease R (RefSeq) | insig. | 91 | 100 |
o | Pantoea sp. MT58 | IAI47_16555 | | type I restriction-modification system endonuclease | insig. | 89 | 100 |
o | Shewanella oneidensis MR-1 | SO4267 | hsdR-2 | type I restriction-modification system, R subunit (NCBI ptt file) | insig. | 40 | 100 |
o | Pseudomonas sp. RS175 | PFR28_03895 | | hypothetical protein | insig. | 41 | 99 |
o | Shewanella sp. ANA-3 | Shewana3_2963 | hsdR | type I restriction enzyme EcoKI subunit R (RefSeq) | insig. | 40 | 99 |
o | Alteromonas macleodii MIT1002 | MIT1002_03395 | | Type-1 restriction enzyme R protein | insig. | 40 | 99 |
| Shewanella sp. ANA-3 | Shewana3_2026 | | type III restriction enzyme, res subunit (RefSeq) | insig. | 26 | 72 |
| Serratia liquefaciens MT49 | IAI46_02405 | | DEAD/DEAH box helicase family protein | insig. | 27 | 72 |
| Bacteroides thetaiotaomicron VPI-5482 | BT4517 | | Type I restriction enzyme EcoKI R protein (NCBI ptt file) | insig. | 28 | 54 |
| Bacteroides stercoris CC31F | HMPREF1181_RS13645 | | DEAD/DEAH box helicase family protein | insig. | 27 | 57 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS21435 | | DEAD/DEAH box helicase family protein | insig. | 28 | 54 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS07505 | | DEAD/DEAH box helicase family protein | insig. | 27 | 54 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0422 | | Type I site-specific restriction-modification system, R (restriction) subunit and related helicases | insig. | 27 | 66 |
| Paraburkholderia graminis OAS925 | ABIE53_005410 | | type I restriction enzyme R subunit | insig. | 27 | 65 |
| Pseudomonas putida KT2440 | PP_4740 | | Type I restriction enzyme EcoAI R protein | insig. | 28 | 52 |
| Rhodanobacter sp000427505 FW510-R12 | LRK53_RS01075 | | DEAD/DEAH box helicase family protein | insig. | 28 | 47 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0384 | | Type I site-specific restriction-modification system, R (restriction) subunit and related helicases | insig. | 29 | 55 |
| Dickeya dianthicola 67-19 | HGI48_RS21705 | | DEAD/DEAH box helicase family protein | insig. | 27 | 51 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_13985 | | Restriction endonuclease | cofit | 28 | 47 |
| Pseudomonas stutzeri RCH2 | Psest_1100 | | Type I site-specific restriction-modification system, R (restriction) subunit and related helicases | insig. | 28 | 51 |
| Escherichia coli ECOR38 | HEPCGN_09450 | hsdR | DEAD/DEAH box helicase | cofit | 26 | 52 |
| Escherichia coli ECRC100 | OKFHMN_11410 | hsdR | DEAD/DEAH box helicase | insig. | 26 | 52 |
| Escherichia coli ECRC101 | MCAODC_01925 | hsdR | DEAD/DEAH box helicase | insig. | 26 | 52 |
| Escherichia coli ECRC102 | NIAGMN_09260 | hsdR | DEAD/DEAH box helicase | insig. | 26 | 52 |
| Escherichia coli ECRC98 | JDDGAC_15005 | hsdR | DEAD/DEAH box helicase | cofit | 26 | 52 |
| Escherichia coli ECRC99 | KEDOAH_16735 | hsdR | DEAD/DEAH box helicase | no data | 26 | 52 |
| Methylophilus sp. DMC18 | GFF1952 | | hypothetical protein | cofit | 28 | 47 |
| Castellaniella sp019104865 MT123 | ABCV34_RS05460 | | DEAD/DEAH box helicase family protein | insig. | 28 | 40 |
| Ralstonia solanacearum PSI07 | RPSI07_RS08090 | | restriction endonuclease subunit R | insig. | 25 | 48 |
| Ralstonia solanacearum GMI1000 | RS_RS17010 | | restriction endonuclease subunit R | insig. | 26 | 48 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS09180 | | restriction endonuclease subunit R | insig. | 26 | 48 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_3106 | | Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) | insig. | 28 | 32 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01525 | | Putative DNA repair helicase RadD | insig. | 27 | 38 |
| Escherichia coli ECOR38 | HEPCGN_22620 | radD | Putative DNA repair helicase RadD | cofit | 27 | 38 |
| Escherichia coli BL21 | ECD_02114 | | putative ATP-dependent DNA or RNA helicase | sig. | 27 | 38 |
| Escherichia coli BW25113 | b2184 | yejH | DNA damage response helicase (yejH or radD) (from data) | strong | 27 | 38 |
| Escherichia coli ECRC100 | OKFHMN_23355 | radD | Putative DNA repair helicase RadD | cofit | 27 | 38 |
| Escherichia coli ECRC101 | MCAODC_14405 | radD | Putative DNA repair helicase RadD | insig. | 27 | 38 |
| Escherichia coli ECRC102 | NIAGMN_21120 | radD | Putative DNA repair helicase RadD | insig. | 27 | 38 |
| Escherichia coli ECRC98 | JDDGAC_27315 | radD | Putative DNA repair helicase RadD | cofit | 27 | 38 |
| Escherichia coli ECRC99 | KEDOAH_04830 | radD | Putative DNA repair helicase RadD | no data | 27 | 38 |
| Escherichia coli ECOR27 | NOLOHH_14930 | radD | Putative DNA repair helicase RadD | cofit | 26 | 38 |
| Escherichia coli ECRC62 | BNILDI_13850 | radD | Putative DNA repair helicase RadD | insig. | 26 | 38 |
| Escherichia fergusonii Becca | EFB2_01672 | | Putative DNA repair helicase RadD | insig. | 27 | 38 |
| Escherichia coli Nissle 1917 | ECOLIN_RS12765 | | DEAD/DEAH box helicase | insig. | 27 | 38 |
| Shewanella amazonensis SB2B | Sama_2080 | | DNA damage response helicase (yejH or radD) (from data) | sig. | 26 | 36 |
| Shewanella oneidensis MR-1 | SO0368 | | helicase (NCBI ptt file) | insig. | 27 | 32 |
| Pantoea sp. MT58 | IAI47_06580 | | DEAD/DEAH box helicase | insig. | 27 | 34 |
| Marinobacter adhaerens HP15 | HP15_2832 | | DNA damage response helicase (yejH or radD) (from data) | sig. | 27 | 36 |
| Shewanella loihica PV-4 | Shew_1532 | | type III restriction enzyme, res subunit (RefSeq) | insig. | 26 | 37 |
| Shewanella sp. ANA-3 | Shewana3_2524 | | type III restriction enzyme, res subunit (RefSeq) | insig. | 26 | 34 |
| Erwinia tracheiphila SCR3 | LU632_RS17600 | | DEAD/DEAH box helicase | insig. | 26 | 34 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3752 | | ATP-dependent RNA helicase YejH | insig. | 26 | 38 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_08225 | | ATP-dependent helicase | insig. | 25 | 36 |
| Dickeya dadantii 3937 | DDA3937_RS09150 | | DEAD/DEAH box helicase | insig. | 26 | 38 |
| Klebsiella michiganensis M5al | BWI76_RS19815 | | ATP-dependent helicase | insig. | 26 | 38 |
| Enterobacter asburiae PDN3 | EX28DRAFT_0377 | | DNA or RNA helicases of superfamily II | insig. | 26 | 38 |
| Rahnella sp. WP5 | EX31_RS19200 | | DEAD/DEAH box helicase | insig. | 25 | 35 |
| Serratia liquefaciens MT49 | IAI46_17350 | | DEAD/DEAH box helicase family protein | insig. | 25 | 34 |
| Shewanella oneidensis MR-1 | SO1408 | | helicase, putative (NCBI ptt file) | insig. | 25 | 34 |
| Dickeya dianthicola ME23 | DZA65_RS09490 | | DEAD/DEAH box helicase | insig. | 25 | 34 |
| Erwinia amylovora T8 | OLJFJH_11705 | | ATP-dependent helicase | insig. | 25 | 34 |
| Magnetospirillum magneticum AMB-1 | AMB_RS01810 | | DNA helicase | insig. | 25 | 36 |
| Synechococcus elongatus PCC 7942 | Synpcc7942_0725 | | DEAD/DEAH box helicase-like | insig. | 26 | 35 |
| Enterobacter sp. TBS_079 | MPMX20_03150 | | Putative DNA repair helicase RadD | insig. | 26 | 38 |
| Shewanella oneidensis MR-1 | SO2744 | | DNA damage response helicase (yejH or radD) (from data) | strong | 25 | 36 |
| Pectobacterium carotovorum WPP14 | HER17_RS12960 | | DEAD/DEAH box helicase family protein | insig. | 25 | 34 |
| Dickeya dianthicola 67-19 | HGI48_RS09190 | | DEAD/DEAH box helicase | insig. | 26 | 34 |
| Cellulophaga baltica 18 | M666_RS16985 | | DEAD/DEAH box helicase | insig. | 25 | 32 |
| Bifidobacterium breve UCC2003 | BBR_RS10690 | | DUF3427 domain-containing protein | cofit | 23 | 40 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_04190 | | DEAD/DEAH box helicase | insig. | 24 | 34 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS03500 | | DEAD/DEAH box helicase | insig. | 23 | 35 |
| Paraburkholderia graminis OAS925 | ABIE53_000533 | | type I restriction enzyme R subunit | insig. | 21 | 32 |
| Cellulophaga baltica 18 | M666_RS16900 | | DEAD/DEAH box helicase family protein | insig. | 40 | 7 |
| Rhodanobacter denitrificans MT42 | LRK55_RS05060 | | DEAD/DEAH box helicase family protein | cofit | 25 | 22 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS03160 | | type I restriction endonuclease subunit R | insig. | 26 | 19 |
| Caulobacter crescentus NA1000 | CCNA_00659 | | type I restriction-modification system restriction subunit | insig. | 24 | 33 |
| Caulobacter crescentus NA1000 Δfur | CCNA_00659 | | type I restriction-modification system restriction subunit | cofit | 24 | 33 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_01540 | sSL2 | restriction endonuclease subunit R | insig. | 25 | 22 |
| Rhodanobacter sp000427505 FW510-R12 | LRK53_RS04735 | | DEAD/DEAH box helicase family protein | insig. | 25 | 22 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS05280 | | DEAD/DEAH box helicase family protein | insig. | 30 | 10 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2633 | | Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) | no data | 29 | 10 |
| Castellaniella sp019104865 MT123 | ABCV34_RS09190 | | type I restriction endonuclease subunit R | insig. | 22 | 19 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS15095 | | type I restriction endonuclease subunit R | no data | 29 | 9 |
| Bacteroides ovatus ATCC 8483 | BACOVA_05330 | | type I site-specific deoxyribonuclease, HsdR family | insig. | 23 | 18 |
| Bacteroides thetaiotaomicron VPI-5482 | BT4535 | | Type I restriction enzyme EcoR124II R protein (NCBI ptt file) | cofit | 25 | 19 |
| Alteromonas macleodii MIT1002 | MIT1002_03210 | | Type-1 restriction enzyme R protein | insig. | 20 | 30 |
| Escherichia coli ECRC62 | BNILDI_07600 | hsdR | Type I restriction enzyme EcoR124II endonuclease subunit | insig. | 28 | 9 |
| Alteromonas macleodii MIT1002 | MIT1002_00593 | | Type I restriction enzyme EcoR124II R protein | cofit | 24 | 15 |
| Dickeya dianthicola ME23 | DZA65_RS03370 | | type I restriction endonuclease subunit R | insig. | 25 | 18 |