Homologs of GFF1002 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)
SEED: Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)
KEGG: type I restriction enzyme, R subunit

92 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1002 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) insig. 100 100
o Escherichia coli BL21 ECD_04216 endonuclease R Type I restriction enzyme insig. 91 100
o Escherichia coli BW25113 b4350 hsdR endonuclease R (RefSeq) insig. 91 100
o Pantoea sp. MT58 IAI47_16555 type I restriction-modification system endonuclease insig. 89 100
o Shewanella oneidensis MR-1 SO4267 hsdR-2 type I restriction-modification system, R subunit (NCBI ptt file) insig. 40 100
o Pseudomonas sp. RS175 PFR28_03895 hypothetical protein insig. 41 99
o Shewanella sp. ANA-3 Shewana3_2963 hsdR type I restriction enzyme EcoKI subunit R (RefSeq) insig. 40 99
o Alteromonas macleodii MIT1002 MIT1002_03395 Type-1 restriction enzyme R protein insig. 40 99
  Shewanella sp. ANA-3 Shewana3_2026 type III restriction enzyme, res subunit (RefSeq) insig. 26 72
  Serratia liquefaciens MT49 IAI46_02405 DEAD/DEAH box helicase family protein insig. 27 72
  Bacteroides thetaiotaomicron VPI-5482 BT4517 Type I restriction enzyme EcoKI R protein (NCBI ptt file) insig. 28 54
  Bacteroides stercoris CC31F HMPREF1181_RS13645 DEAD/DEAH box helicase family protein insig. 27 57
  Phocaeicola dorei CL03T12C01 ABI39_RS21435 DEAD/DEAH box helicase family protein insig. 28 54
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS07505 DEAD/DEAH box helicase family protein insig. 27 54
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0422 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases insig. 27 66
  Paraburkholderia graminis OAS925 ABIE53_005410 type I restriction enzyme R subunit insig. 27 65
  Pseudomonas putida KT2440 PP_4740 Type I restriction enzyme EcoAI R protein insig. 28 52
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS01075 DEAD/DEAH box helicase family protein insig. 28 47
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0384 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases insig. 29 55
  Dickeya dianthicola 67-19 HGI48_RS21705 DEAD/DEAH box helicase family protein insig. 27 51
  Rhodanobacter sp. FW510-T8 OKGIIK_13985 Restriction endonuclease cofit 28 47
  Pseudomonas stutzeri RCH2 Psest_1100 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases insig. 28 51
  Escherichia coli ECOR38 HEPCGN_09450 hsdR DEAD/DEAH box helicase cofit 26 52
  Escherichia coli ECRC100 OKFHMN_11410 hsdR DEAD/DEAH box helicase insig. 26 52
  Escherichia coli ECRC101 MCAODC_01925 hsdR DEAD/DEAH box helicase insig. 26 52
  Escherichia coli ECRC102 NIAGMN_09260 hsdR DEAD/DEAH box helicase insig. 26 52
  Escherichia coli ECRC98 JDDGAC_15005 hsdR DEAD/DEAH box helicase cofit 26 52
  Escherichia coli ECRC99 KEDOAH_16735 hsdR DEAD/DEAH box helicase no data 26 52
  Methylophilus sp. DMC18 GFF1952 hypothetical protein cofit 28 47
  Castellaniella sp019104865 MT123 ABCV34_RS05460 DEAD/DEAH box helicase family protein insig. 28 40
  Ralstonia solanacearum PSI07 RPSI07_RS08090 restriction endonuclease subunit R insig. 25 48
  Ralstonia solanacearum GMI1000 RS_RS17010 restriction endonuclease subunit R insig. 26 48
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS09180 restriction endonuclease subunit R insig. 26 48
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3106 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) insig. 28 32
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01525 Putative DNA repair helicase RadD insig. 27 38
  Escherichia coli ECOR38 HEPCGN_22620 radD Putative DNA repair helicase RadD cofit 27 38
  Escherichia coli BL21 ECD_02114 putative ATP-dependent DNA or RNA helicase sig. 27 38
  Escherichia coli BW25113 b2184 yejH DNA damage response helicase (yejH or radD) (from data) strong 27 38
  Escherichia coli ECRC100 OKFHMN_23355 radD Putative DNA repair helicase RadD cofit 27 38
  Escherichia coli ECRC101 MCAODC_14405 radD Putative DNA repair helicase RadD insig. 27 38
  Escherichia coli ECRC102 NIAGMN_21120 radD Putative DNA repair helicase RadD insig. 27 38
  Escherichia coli ECRC98 JDDGAC_27315 radD Putative DNA repair helicase RadD cofit 27 38
  Escherichia coli ECRC99 KEDOAH_04830 radD Putative DNA repair helicase RadD no data 27 38
  Escherichia coli ECOR27 NOLOHH_14930 radD Putative DNA repair helicase RadD cofit 26 38
  Escherichia coli ECRC62 BNILDI_13850 radD Putative DNA repair helicase RadD insig. 26 38
  Escherichia fergusonii Becca EFB2_01672 Putative DNA repair helicase RadD insig. 27 38
  Escherichia coli Nissle 1917 ECOLIN_RS12765 DEAD/DEAH box helicase insig. 27 38
  Shewanella amazonensis SB2B Sama_2080 DNA damage response helicase (yejH or radD) (from data) sig. 26 36
  Shewanella oneidensis MR-1 SO0368 helicase (NCBI ptt file) insig. 27 32
  Pantoea sp. MT58 IAI47_06580 DEAD/DEAH box helicase insig. 27 34
  Marinobacter adhaerens HP15 HP15_2832 DNA damage response helicase (yejH or radD) (from data) sig. 27 36
  Shewanella loihica PV-4 Shew_1532 type III restriction enzyme, res subunit (RefSeq) insig. 26 37
  Shewanella sp. ANA-3 Shewana3_2524 type III restriction enzyme, res subunit (RefSeq) insig. 26 34
  Erwinia tracheiphila SCR3 LU632_RS17600 DEAD/DEAH box helicase insig. 26 34
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3752 ATP-dependent RNA helicase YejH insig. 26 38
  Vibrio cholerae E7946 ATCC 55056 CSW01_08225 ATP-dependent helicase insig. 25 36
  Dickeya dadantii 3937 DDA3937_RS09150 DEAD/DEAH box helicase insig. 26 38
  Klebsiella michiganensis M5al BWI76_RS19815 ATP-dependent helicase insig. 26 38
  Enterobacter asburiae PDN3 EX28DRAFT_0377 DNA or RNA helicases of superfamily II insig. 26 38
  Rahnella sp. WP5 EX31_RS19200 DEAD/DEAH box helicase insig. 25 35
  Serratia liquefaciens MT49 IAI46_17350 DEAD/DEAH box helicase family protein insig. 25 34
  Shewanella oneidensis MR-1 SO1408 helicase, putative (NCBI ptt file) insig. 25 34
  Dickeya dianthicola ME23 DZA65_RS09490 DEAD/DEAH box helicase insig. 25 34
  Erwinia amylovora T8 OLJFJH_11705 ATP-dependent helicase insig. 25 34
  Magnetospirillum magneticum AMB-1 AMB_RS01810 DNA helicase insig. 25 36
  Synechococcus elongatus PCC 7942 Synpcc7942_0725 DEAD/DEAH box helicase-like insig. 26 35
  Enterobacter sp. TBS_079 MPMX20_03150 Putative DNA repair helicase RadD insig. 26 38
  Shewanella oneidensis MR-1 SO2744 DNA damage response helicase (yejH or radD) (from data) strong 25 36
  Pectobacterium carotovorum WPP14 HER17_RS12960 DEAD/DEAH box helicase family protein insig. 25 34
  Dickeya dianthicola 67-19 HGI48_RS09190 DEAD/DEAH box helicase insig. 26 34
  Cellulophaga baltica 18 M666_RS16985 DEAD/DEAH box helicase insig. 25 32
  Bifidobacterium breve UCC2003 BBR_RS10690 DUF3427 domain-containing protein cofit 23 40
  Vibrio cholerae E7946 ATCC 55056 CSW01_04190 DEAD/DEAH box helicase insig. 24 34
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03500 DEAD/DEAH box helicase insig. 23 35
  Paraburkholderia graminis OAS925 ABIE53_000533 type I restriction enzyme R subunit insig. 21 32
  Cellulophaga baltica 18 M666_RS16900 DEAD/DEAH box helicase family protein insig. 40 7
  Rhodanobacter denitrificans MT42 LRK55_RS05060 DEAD/DEAH box helicase family protein cofit 25 22
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS03160 type I restriction endonuclease subunit R insig. 26 19
  Caulobacter crescentus NA1000 CCNA_00659 type I restriction-modification system restriction subunit insig. 24 33
  Caulobacter crescentus NA1000 Δfur CCNA_00659 type I restriction-modification system restriction subunit cofit 24 33
  Rhodanobacter sp. FW510-T8 OKGIIK_01540 sSL2 restriction endonuclease subunit R insig. 25 22
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS04735 DEAD/DEAH box helicase family protein insig. 25 22
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05280 DEAD/DEAH box helicase family protein insig. 30 10
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2633 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) no data 29 10
  Castellaniella sp019104865 MT123 ABCV34_RS09190 type I restriction endonuclease subunit R insig. 22 19
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15095 type I restriction endonuclease subunit R no data 29 9
  Bacteroides ovatus ATCC 8483 BACOVA_05330 type I site-specific deoxyribonuclease, HsdR family insig. 23 18
  Bacteroides thetaiotaomicron VPI-5482 BT4535 Type I restriction enzyme EcoR124II R protein (NCBI ptt file) cofit 25 19
  Alteromonas macleodii MIT1002 MIT1002_03210 Type-1 restriction enzyme R protein insig. 20 30
  Escherichia coli ECRC62 BNILDI_07600 hsdR Type I restriction enzyme EcoR124II endonuclease subunit insig. 28 9
  Alteromonas macleodii MIT1002 MIT1002_00593 Type I restriction enzyme EcoR124II R protein cofit 24 15
  Dickeya dianthicola ME23 DZA65_RS03370 type I restriction endonuclease subunit R insig. 25 18