Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Rahnella sp. WP5 | EX31_RS09220 | | MurR/RpiR family transcriptional regulator | insig. | 100 | 100 |
| Rahnella sp. WP5 | EX31_RS20760 | | MurR/RpiR family transcriptional regulator | cofit | 32 | 94 |
| Pantoea sp. MT58 | IAI47_09995 | | MurR/RpiR family transcriptional regulator | sig. | 32 | 99 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_01085 | | MurR/RpiR family transcriptional regulator | insig. | 33 | 87 |
| Klebsiella michiganensis M5al | BWI76_RS21290 | | DNA-binding transcriptional regulator | sig. | 31 | 94 |
| Acidovorax sp. GW101-3H11 | Ac3H11_2055 | | Probable transcriptional regulator | strong | 33 | 97 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2466 | | Sialic acid utilization regulator, RpiR family | insig. | 36 | 85 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1364 | | Phosphogluconate repressor HexR, RpiR family | insig. | 32 | 97 |
| Enterobacter asburiae PDN3 | EX28DRAFT_0085 | | transcriptional regulator, RpiR family | insig. | 31 | 93 |
| Serratia liquefaciens MT49 | IAI46_19515 | | MurR/RpiR family transcriptional regulator | insig. | 32 | 90 |
| Enterobacter sp. TBS_079 | MPMX20_03432 | | HTH-type transcriptional regulator MurR | insig. | 31 | 93 |
| Enterobacter sp. TBS_079 | MPMX20_00309 | | HTH-type transcriptional regulator RpiR | strong | 30 | 93 |
| Klebsiella michiganensis M5al | BWI76_RS02170 | | MurR/RpiR family transcriptional regulator | insig. | 29 | 92 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS26925 | | MurR/RpiR family transcriptional regulator | sig. | 32 | 97 |
| Pectobacterium carotovorum WPP14 | HER17_RS11785 | | MurR/RpiR family transcriptional regulator | cofit | 30 | 98 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04279 | | transcriptional regulator, RpiR family | sig. | 29 | 98 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS06120 | | transcriptional regulator | sig. | 29 | 98 |
| Escherichia fergusonii Becca | EFB2_04493 | | HTH-type transcriptional regulator RpiR | insig. | 29 | 92 |
| Escherichia coli ECOR27 | NOLOHH_04970 | alsR | als operon DNA-binding transcriptional repressor AlsR | insig. | 29 | 92 |
| Escherichia coli ECOR38 | HEPCGN_11340 | alsR | als operon DNA-binding transcriptional repressor AlsR | insig. | 29 | 92 |
| Escherichia coli Nissle 1917 | ECOLIN_RS23685 | | D-allose utilization transcriptional regulator AlsR | insig. | 29 | 92 |
| Escherichia coli BW25113 | b4089 | rpiR | transcriptional repressor of rpiB expression (VIMSS) | strong | 29 | 92 |
| Burkholderia phytofirmans PsJN | BPHYT_RS16740 | | transcriptional regulator | strong | 31 | 90 |
| Shewanella oneidensis MR-1 | SO2490 | | transcriptional regulator, RpiR family (NCBI ptt file) | strong | 31 | 94 |
| Klebsiella michiganensis M5al | BWI76_RS00065 | | MurR/RpiR family transcriptional regulator | strong | 29 | 91 |
| Dickeya dadantii 3937 | DDA3937_RS10130 | | MurR/RpiR family transcriptional regulator | cofit | 30 | 96 |
| Shewanella loihica PV-4 | Shew_2049 | | DNA-binding transcriptional regulator HexR (RefSeq) | strong | 29 | 94 |
| Escherichia coli BL21 | ECD_03961 | | d-allose-inducible als operon transcriptional repressor; autorepressor; repressor of rpiR | insig. | 29 | 92 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS03320 | | bifunctional transcriptional regulator/glucokinase | strong | 30 | 90 |
| Azospirillum brasilense Sp245 | AZOBR_RS30190 | | transcriptional regulator | insig. | 30 | 94 |
| Shewanella sp. ANA-3 | Shewana3_2152 | | DNA-binding transcriptional regulator HexR (RefSeq) | strong | 30 | 94 |
| Burkholderia phytofirmans PsJN | BPHYT_RS05010 | | RpiR family transcriptional regulator | strong | 30 | 90 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00163 | | glucokinase /transcriptional regulator, RpiR family | strong | 30 | 90 |
| Paraburkholderia graminis OAS925 | ABIE53_001273 | | glucokinase | strong | 30 | 90 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3305 | | Sialic acid utilization regulator, RpiR family | insig. | 29 | 90 |
| Erwinia amylovora T8 | OLJFJH_10280 | | MurR/RpiR family transcriptional regulator | insig. | 32 | 90 |
| Dickeya dianthicola 67-19 | HGI48_RS10160 | | MurR/RpiR family transcriptional regulator | cofit | 30 | 96 |
| Dickeya dianthicola ME23 | DZA65_RS10575 | | MurR/RpiR family transcriptional regulator | insig. | 30 | 96 |
| Shewanella amazonensis SB2B | Sama_1813 | | DNA-binding transcriptional regulator HexR (RefSeq) | strong | 29 | 95 |
| Paraburkholderia graminis OAS925 | ABIE53_003518 | | RpiR family carbohydrate utilization transcriptional regulator | strong | 29 | 97 |
| Castellaniella sp019104865 MT123 | ABCV34_RS08655 | | SIS domain-containing protein | insig. | 31 | 92 |
| Alteromonas macleodii MIT1002 | MIT1002_02408 | | putative HTH-type transcriptional regulator YbbH | no data | 30 | 95 |
| Erwinia tracheiphila SCR3 | LU632_RS18000 | | MurR/RpiR family transcriptional regulator | insig. | 32 | 91 |
| Rahnella sp. WP5 | EX31_RS21865 | | MurR/RpiR family transcriptional regulator | insig. | 31 | 96 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_05825 | | transcriptional regulator HexR | cofit | 29 | 94 |
o | Bifidobacterium breve UCC2003 | BBR_RS13225 | | MurR/RpiR family transcriptional regulator | sig. | 31 | 89 |
| Escherichia coli ECOR38 | HEPCGN_21315 | murR | HTH-type transcriptional regulator MurR | insig. | 30 | 88 |
| Enterobacter sp. TBS_079 | MPMX20_03648 | | putative HTH-type transcriptional regulator YbbH | sig. | 29 | 85 |
| Pantoea sp. MT58 | IAI47_04910 | | MurR/RpiR family transcriptional regulator | strong | 30 | 96 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01296 | | HTH-type transcriptional regulator MurR | insig. | 30 | 88 |
| Escherichia coli ECRC62 | BNILDI_12685 | murR | HTH-type transcriptional regulator MurR | cofit | 30 | 87 |
| Paraburkholderia graminis OAS925 | ABIE53_004499 | | RpiR family carbohydrate utilization transcriptional regulator | sig. | 32 | 92 |
| Escherichia coli BW25113 | b2427 | yfeT | predicted DNA-binding transcriptional regulator (NCBI) | insig. | 30 | 87 |
| Escherichia coli BL21 | ECD_02327 | | repressor for murPQ, MurNAc 6-P inducible | insig. | 30 | 87 |
| Escherichia coli ECOR27 | NOLOHH_13820 | murR | HTH-type transcriptional regulator MurR | insig. | 30 | 87 |
| Escherichia coli ECRC100 | OKFHMN_22140 | murR | HTH-type transcriptional regulator MurR | cofit | 30 | 88 |
| Escherichia coli ECRC101 | MCAODC_12670 | murR | HTH-type transcriptional regulator MurR | insig. | 30 | 88 |
| Escherichia coli ECRC102 | NIAGMN_19910 | murR | HTH-type transcriptional regulator MurR | insig. | 30 | 88 |
| Escherichia coli ECRC98 | JDDGAC_26090 | murR | HTH-type transcriptional regulator MurR | cofit | 30 | 88 |
| Escherichia coli ECRC99 | KEDOAH_06080 | murR | HTH-type transcriptional regulator MurR | no data | 30 | 88 |
| Escherichia coli BL21 | ECD_02455 | | putative DNA-binding transcriptional regulator | insig. | 30 | 92 |
| Escherichia fergusonii Becca | EFB2_01335 | | HTH-type transcriptional regulator MurR | insig. | 30 | 92 |
| Escherichia coli ECOR27 | NOLOHH_13125 | yfhH | MurR/RpiR family transcriptional regulator | insig. | 30 | 92 |
| Escherichia coli ECOR38 | HEPCGN_20595 | yfhH | MurR/RpiR family transcriptional regulator | insig. | 30 | 92 |
| Escherichia coli ECRC100 | OKFHMN_21450 | yfhH | MurR/RpiR family transcriptional regulator | insig. | 30 | 92 |
| Escherichia coli ECRC101 | MCAODC_11980 | yfhH | MurR/RpiR family transcriptional regulator | insig. | 30 | 92 |
| Escherichia coli ECRC102 | NIAGMN_19220 | yfhH | MurR/RpiR family transcriptional regulator | insig. | 30 | 92 |
| Escherichia coli ECRC62 | BNILDI_11925 | yfhH | MurR/RpiR family transcriptional regulator | insig. | 30 | 92 |
| Escherichia coli ECRC98 | JDDGAC_25115 | yfhH | MurR/RpiR family transcriptional regulator | insig. | 30 | 92 |
| Escherichia coli ECRC99 | KEDOAH_06770 | yfhH | MurR/RpiR family transcriptional regulator | no data | 30 | 92 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01146 | | HTH-type transcriptional regulator MurR | insig. | 30 | 92 |
| Escherichia coli Nissle 1917 | ECOLIN_RS14490 | | MurR/RpiR family transcriptional regulator | insig. | 30 | 92 |
| Escherichia coli BW25113 | b2561 | yfhH | orf, hypothetical protein (VIMSS) | insig. | 30 | 92 |
| Rahnella sp. WP5 | EX31_RS10635 | | MurR/RpiR family transcriptional regulator | sig. | 29 | 98 |
| Azospirillum sp. SherDot2 | MPMX19_04844 | | HTH-type transcriptional regulator HexR | insig. | 28 | 95 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03750 | | transcriptional regulator, RpiR family | insig. | 33 | 86 |
| Enterobacter asburiae PDN3 | EX28DRAFT_2858 | | transcriptional regulator, RpiR family | insig. | 29 | 85 |
| Azospirillum sp. SherDot2 | MPMX19_06075 | | HTH-type transcriptional regulator HexR | no data | 32 | 90 |
| Burkholderia phytofirmans PsJN | BPHYT_RS35685 | | RpiR family transcriptional regulator | no data | 30 | 92 |
| Serratia liquefaciens MT49 | IAI46_14580 | | MurR/RpiR family transcriptional regulator | insig. | 29 | 98 |
| Azospirillum sp. SherDot2 | MPMX19_05117 | | HTH-type transcriptional regulator HexR | insig. | 31 | 92 |
| Rahnella sp. WP5 | EX31_RS07935 | | MurR/RpiR family transcriptional regulator | insig. | 30 | 91 |
| Pseudomonas fluorescens SBW25 | PFLU_RS23730 | | MurR/RpiR family transcriptional regulator | strong | 29 | 91 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS23730 | | MurR/RpiR family transcriptional regulator | strong | 29 | 91 |
| Pseudomonas sp. BP01 | JOY50_RS11445 | hexR | DNA-binding transcriptional regulator HexR | insig. | 29 | 91 |
| Pseudomonas simiae WCS417 | PS417_22115 | | transcriptional regulator | strong | 29 | 91 |
| Pseudomonas aeruginosa PA14 | IKLFDK_16180 | | HTH-type transcriptional regulator HexR | insig. | 29 | 91 |
| Erwinia tracheiphila SCR3 | LU632_RS13365 | | MurR/RpiR family transcriptional regulator | insig. | 31 | 98 |
| Pseudomonas syringae pv. syringae B728a | Psyr_1119 | | Helix-turn-helix protein RpiR:Sugar isomerase (SIS) | strong | 29 | 91 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1119 | | Helix-turn-helix protein RpiR:Sugar isomerase (SIS) | insig. | 29 | 91 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_05165 | | transcriptional regulator | strong | 29 | 91 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2886 | | Phosphogluconate repressor HexR, RpiR family | strong | 29 | 91 |
| Pseudomonas putida KT2440 | PP_1021 | | DNA-binding transcriptional regulator | strong | 29 | 91 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS15880 | | MurR/RpiR family transcriptional regulator | insig. | 30 | 93 |
| Pseudomonas sp. DMC3 | GFF5141 | | HTH-type transcriptional regulator HexR | cofit | 29 | 91 |
| Pseudomonas sp. RS175 | PFR28_00572 | | HTH-type transcriptional regulator HexR | strong | 29 | 91 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_03365 | | transcriptional regulator | strong | 29 | 91 |
| Escherichia coli ECOR27 | NOLOHH_16840 | hexR | DNA-binding transcriptional regulator HexR | cofit | 28 | 98 |
| Escherichia coli ECOR38 | HEPCGN_04730 | hexR | DNA-binding transcriptional regulator HexR | insig. | 28 | 98 |
| Escherichia coli ECRC100 | OKFHMN_26325 | hexR | DNA-binding transcriptional regulator HexR | cofit | 28 | 98 |