| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Rahnella sp. WP5 | EX31_RS07120 | | LysR family transcriptional regulator | insig. | 100 | 100 |
| o | Pseudomonas simiae WCS417 | PS417_16020 | | LysR family transcriptional regulator | insig. | 56 | 99 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1028 | | Transcriptional regulator, LysR family | insig. | 56 | 99 |
| o | Pseudomonas orientalis W4I3 | QF045_RS13965 | | LysR family transcriptional regulator | insig. | 56 | 99 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS17970 | | LysR family transcriptional regulator | insig. | 56 | 99 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS17970 | | LysR family transcriptional regulator | insig. | 56 | 99 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02600 | | HTH-type transcriptional regulator GltR | insig. | 56 | 99 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_29285 | | LysR family transcriptional regulator | insig. | 55 | 99 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_3600 | | transcriptional regulator, LysR family | insig. | 55 | 99 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3600 | | transcriptional regulator, LysR family | insig. | 55 | 99 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS04580 | | LysR family transcriptional regulator | sig. | 55 | 99 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_13050 | | LysR family transcriptional regulator | insig. | 55 | 99 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS35245 | | LysR family transcriptional regulator | insig. | 55 | 99 |
| o | Pseudomonas putida KT2440 | PP_3227 | | Transcriptional regulator, LysR family | insig. | 56 | 92 |
| o | Pseudomonas sp. BP01 | JOY50_RS23505 | | LysR family transcriptional regulator | insig. | 53 | 100 |
| o | Paraburkholderia graminis OAS925 | ABIE53_001760 | | DNA-binding transcriptional LysR family regulator | insig. | 48 | 98 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS11830 | | LysR family transcriptional regulator | insig. | 46 | 100 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS07655 | | LysR family transcriptional regulator | no data | 47 | 97 |
| o | Klebsiella michiganensis M5al | BWI76_RS16870 | | LysR family transcriptional regulator | insig. | 42 | 99 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_24025 | | LysR family transcriptional regulator | insig. | 42 | 99 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS39470 | | LysR family transcriptional regulator | insig. | 42 | 93 |
| o | Agrobacterium fabrum C58 | Atu6088 | | transcriptional regulator, LysR family | insig. | 38 | 98 |
| o | Azospirillum sp. SherDot2 | MPMX19_01645 | | HTH-type transcriptional regulator GltC | insig. | 33 | 100 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS30630 | | transcriptional regulator | no data | 33 | 96 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS00175 | | LysR family transcriptional regulator | insig. | 31 | 86 |
| | Pseudomonas sp. SVBP6 | COO64_RS15760 | | LysR family transcriptional regulator | insig. | 27 | 100 |
| | Acinetobacter baumannii LAC-4 | RR41_RS01910 | | LysR family transcriptional regulator | insig. | 25 | 98 |
| | Agrobacterium fabrum C58 | Atu4264 | | LysR family transcriptional regulator | strong | 31 | 81 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF3314 | | Transcriptional regulator | insig. | 30 | 83 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS30655 | | LysR family transcriptional regulator | insig. | 28 | 91 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2397 | | transcriptional regulator, LysR family | insig. | 37 | 41 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2397 | | transcriptional regulator, LysR family | insig. | 37 | 41 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS22450 | | LysR family transcriptional regulator | insig. | 26 | 96 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS22450 | | LysR family transcriptional regulator | insig. | 26 | 96 |
| | Variovorax sp. OAS795 | ABID97_RS18700 | | LysR substrate-binding domain-containing protein | insig. | 27 | 81 |
| | Agrobacterium fabrum C58 | Atu4641 | | LysR family transcriptional regulator | sig. | 23 | 91 |
| | Pseudomonas orientalis W4I3 | QF045_RS22635 | | LysR substrate-binding domain-containing protein | insig. | 27 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS20485 | | LysR family transcriptional regulator | no data | 29 | 64 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2179 | | LysR family transcriptional regulator YbhD | insig. | 29 | 81 |
| | Pseudomonas simiae WCS417 | PS417_20835 | | LysR family transcriptional regulator | insig. | 25 | 96 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS20825 | | LysR family transcriptional regulator | cofit | 34 | 42 |
| | Azospirillum brasilense Sp245 | AZOBR_RS28100 | | LysR family transcriptional regulator | insig. | 30 | 81 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS10750 | | LysR family transcriptional regulator | insig. | 26 | 98 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04052 | | HTH-type transcriptional regulator CynR | cofit | 26 | 83 |
| | Dinoroseobacter shibae DFL-12 | Dshi_3715 | | transcriptional regulator, LysR family (RefSeq) | insig. | 23 | 93 |
| | Escherichia coli ECOR38 | HEPCGN_22995 | ycaN | Uncharacterized HTH-type transcriptional regulator YcaN | insig. | 33 | 49 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS00610 | | LysR substrate-binding domain-containing protein | cofit | 37 | 42 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS00835 | | LysR substrate-binding domain-containing protein | insig. | 37 | 42 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS09295 | | LysR substrate-binding domain-containing protein | insig. | 37 | 42 |
| | Azospirillum sp. SherDot2 | MPMX19_03837 | | HTH-type transcriptional regulator PgrR | insig. | 30 | 65 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1310 | cmpR | ndhF3 operon transcriptional regulator | no data | 28 | 92 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2180 | | transcriptional regulator, LysR family | sig. | 24 | 92 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2180 | | transcriptional regulator, LysR family | insig. | 24 | 92 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04311 | | HTH-type transcriptional regulator GltR | cofit | 26 | 96 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3801 | | transcriptional regulator, LysR family | insig. | 27 | 97 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3801 | | transcriptional regulator, LysR family | insig. | 27 | 97 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1522 | | Transcriptional regulators, LysR family | insig. | 25 | 97 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2484 | | Transcriptional regulators, LysR family | strong | 24 | 97 |
| | Variovorax sp. OAS795 | ABID97_RS11435 | | LysR family transcriptional regulator | insig. | 26 | 83 |
| | Rahnella sp. WP5 | EX31_RS12035 | | LysR family transcriptional regulator | insig. | 29 | 74 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0909 | | transcriptional regulator, LysR family | insig. | 27 | 83 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0909 | | transcriptional regulator, LysR family | insig. | 27 | 83 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02502 | | transcriptional regulator, LysR family | insig. | 36 | 40 |
| | Escherichia coli ECOR27 | NOLOHH_22085 | ycaN | Uncharacterized HTH-type transcriptional regulator YcaN | insig. | 32 | 49 |
| | Escherichia coli ECRC62 | BNILDI_20340 | ycaN | Uncharacterized HTH-type transcriptional regulator YcaN | insig. | 32 | 49 |
| | Enterobacter sp. TBS_079 | MPMX20_01197 | | HTH-type transcriptional regulator PgrR | insig. | 28 | 91 |
| | Ralstonia solanacearum GMI1000 | RS_RS01060 | | LysR family transcriptional regulator | insig. | 28 | 82 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS03985 | | LysR family transcriptional regulator | insig. | 27 | 92 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5605 | | LysR family regulatory protein | no data | 24 | 92 |
| | Shewanella amazonensis SB2B | Sama_0005 | | LysR, substrate-binding (RefSeq) | insig. | 35 | 40 |
| | Rhizobium sp. OAE497 | ABIE40_RS23500 | | LysR family transcriptional regulator | insig. | 29 | 68 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS11465 | | transcriptional regulator | no data | 28 | 87 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS21120 | | LysR family transcriptional regulator | insig. | 28 | 83 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS21120 | | LysR family transcriptional regulator | strong | 28 | 83 |
| | Azospirillum sp. SherDot2 | MPMX19_03557 | | HTH-type transcriptional regulator CynR | insig. | 29 | 81 |
| | Ralstonia solanacearum GMI1000 | RS_RS21490 | | LysR family transcriptional regulator | insig. | 28 | 80 |
| | Azospirillum sp. SherDot2 | MPMX19_02886 | | HTH-type transcriptional regulator CynR | insig. | 27 | 82 |
| | Pseudomonas sp. S08-1 | OH686_10780 | | Transcriptional regulator, LysR family | insig. | 27 | 91 |
| | Azospirillum brasilense Sp245 | AZOBR_RS17420 | | transcriptional regulator LysR family | insig. | 23 | 81 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS04670 | | LysR family transcriptional regulator | insig. | 29 | 98 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU2111 | | transcriptional regulator, LysR family (TIGR) | insig. | 28 | 83 |
| | Azospirillum sp. SherDot2 | MPMX19_05002 | | HTH-type transcriptional regulator DmlR | insig. | 36 | 40 |
| | Dickeya dianthicola ME23 | DZA65_RS14555 | | LysR family transcriptional regulator | insig. | 34 | 41 |
| | Variovorax sp. OAS795 | ABID97_RS12840 | | LysR family transcriptional regulator | no data | 29 | 80 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_408 | | Transcriptional regulators, LysR family | insig. | 25 | 97 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS17255 | | LysR family transcriptional regulator | insig. | 33 | 42 |
| | Variovorax sp. OAS795 | ABID97_RS25295 | | LysR family transcriptional regulator | insig. | 35 | 42 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS17285 | | LysR family transcriptional regulator | strong | 27 | 78 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_10765 | | LysR family transcriptional regulator | sig. | 27 | 78 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS39525 | | LysR family transcriptional regulator | strong | 27 | 78 |
| | Shewanella amazonensis SB2B | Sama_0693 | | RuBisCo operon transcriptional regulator (RefSeq) | insig. | 25 | 100 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_05340 | | LysR family transcriptional regulator | cofit | 25 | 89 |
| | Pseudomonas segetis P6 | ACVTMO_RS11870 | | LysR family transcriptional regulator | insig. | 33 | 40 |
| | Variovorax sp. OAS795 | ABID97_RS25860 | | LysR family transcriptional regulator | insig. | 35 | 58 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS02115 | | LysR substrate-binding domain-containing protein | insig. | 30 | 48 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS12440 | | LysR substrate-binding domain-containing protein | insig. | 25 | 83 |
| | Enterobacter sp. TBS_079 | MPMX20_00892 | | HTH-type transcriptional regulator DmlR | insig. | 28 | 84 |
| | Dinoroseobacter shibae DFL-12 | Dshi_0123 | | transcriptional regulator, LysR family (RefSeq) | sig. | 34 | 40 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_06385 | | Transcriptional regulator | insig. | 33 | 46 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_13385 | lysR | LysR family transcriptional regulator | insig. | 33 | 44 |